RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 HIGD1AQ9Y241 93 aa10.6□□□□□ -0.71
SNRNP200-202ENST00000429650 C19orf71A6NCJ1 209 aa10.59□□□□□ -0.71
SNRNP200-202ENST00000429650 HSBP1O75506 76 aa10.59□□□□□ -0.71
SNRNP200-202ENST00000429650 IGLC1P0CG04 106 aa10.59□□□□□ -0.71
SNRNP200-202ENST00000429650 FBXL15Q9H469 300 aa10.59□□□□□ -0.71
SNRNP200-202ENST00000429650 ZNF492Q9P255 531 aa10.59□□□□□ -0.71
SNRNP200-202ENST00000429650 VPS13CQ709C8 3753 aa10.59□□□□□ -0.71
SNRNP200-202ENST00000429650 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.59□□□□□ -0.71
SNRNP200-202ENST00000429650 PSG1P11464 419 aa10.59□□□□□ -0.71
SNRNP200-202ENST00000429650 CT83Q5H943 113 aa10.59□□□□□ -0.71
SNRNP200-202ENST00000429650 SRSF12Q8WXF0 261 aaKnown RBP10.59□□□□□ -0.71
SNRNP200-202ENST00000429650 TMUB1Q9BVT8 246 aa10.59□□□□□ -0.71
SNRNP200-202ENST00000429650 WNT10AQ9GZT5 417 aa10.59□□□□□ -0.71
SNRNP200-202ENST00000429650 A8MWL6 223 aa10.58□□□□□ -0.72
SNRNP200-202ENST00000429650 P01737 135 aa10.58□□□□□ -0.72
SNRNP200-202ENST00000429650 COX7A1P24310 79 aa10.58□□□□□ -0.72
SNRNP200-202ENST00000429650 LYZP61626 148 aa10.58□□□□□ -0.72
SNRNP200-202ENST00000429650 HBBP68871 147 aa10.58□□□□□ -0.72
SNRNP200-202ENST00000429650 MMDQ15546 238 aa10.58□□□□□ -0.72
SNRNP200-202ENST00000429650 OR2D3Q8NGH3 330 aa10.58□□□□□ -0.72
SNRNP200-202ENST00000429650 GTSF1Q8WW33 167 aa10.58□□□□□ -0.72
SNRNP200-202ENST00000429650 A6NNC1 897 aa10.58□□□□□ -0.72
SNRNP200-202ENST00000429650 CD3EP07766 207 aa10.58□□□□□ -0.72
SNRNP200-202ENST00000429650 IGLC2P0DOY2 106 aa10.58□□□□□ -0.72
SNRNP200-202ENST00000429650 IGLC3P0DOY3 106 aa10.58□□□□□ -0.72
SNRNP200-202ENST00000429650 PRR31Q5SQ13 230 aa10.58□□□□□ -0.72
SNRNP200-202ENST00000429650 RNASEKQ6P5S7 137 aaKnown RBP10.58□□□□□ -0.72
SNRNP200-202ENST00000429650 RPEQ96AT9 228 aa10.58□□□□□ -0.72
SNRNP200-202ENST00000429650 FAM181BA6NEQ2 426 aa10.57□□□□□ -0.72
SNRNP200-202ENST00000429650 I3L2K1 104 aa10.57□□□□□ -0.72
SNRNP200-202ENST00000429650 M0R2Z0 102 aa10.57□□□□□ -0.72
SNRNP200-202ENST00000429650 BATFQ16520 125 aa10.57□□□□□ -0.72
SNRNP200-202ENST00000429650 LCN12Q6JVE5 192 aa10.57□□□□□ -0.72
SNRNP200-202ENST00000429650 SLC25A39Q9BZJ4 359 aaPredicted RBP10.57□□□□□ -0.72
SNRNP200-202ENST00000429650 OTORQ9NRC9 128 aa10.57□□□□□ -0.72
SNRNP200-202ENST00000429650 UQCR10Q9UDW1 63 aa10.57□□□□□ -0.72
SNRNP200-202ENST00000429650 MAP1AP78559 2803 aaPredicted RBP10.57□□□□□ -0.72
SNRNP200-202ENST00000429650 PPIAL4CA0A0B4J2A2 164 aa10.57□□□□□ -0.72
SNRNP200-202ENST00000429650 PPIAL4GP0DN37 164 aa10.57□□□□□ -0.72
SNRNP200-202ENST00000429650 EBLN2Q6P2I7 272 aa10.57□□□□□ -0.72
SNRNP200-202ENST00000429650 TMEM14CQ9P0S9 112 aa10.57□□□□□ -0.72
SNRNP200-202ENST00000429650 SMAD7O15105 426 aaKnown RBP10.56□□□□□ -0.72
SNRNP200-202ENST00000429650 RBP4P02753 201 aa10.56□□□□□ -0.72
SNRNP200-202ENST00000429650 RBPJQ06330 500 aa10.56□□□□□ -0.72
SNRNP200-202ENST00000429650 Q86TA4 180 aa10.56□□□□□ -0.72
SNRNP200-202ENST00000429650 ATOH7Q8N100 152 aa10.56□□□□□ -0.72
SNRNP200-202ENST00000429650 URB1-AS1Q96HZ7 61 aa10.56□□□□□ -0.72
SNRNP200-202ENST00000429650 PGLYRP4Q96LB8 373 aa10.56□□□□□ -0.72
SNRNP200-202ENST00000429650 LPAR2Q9HBW0 351 aa10.56□□□□□ -0.72
SNRNP200-202ENST00000429650 SOX21Q9Y651 276 aaPredicted RBP10.56□□□□□ -0.72
SNRNP200-202ENST00000429650 CELSR1Q9NYQ6 3014 aa10.56□□□□□ -0.72
SNRNP200-202ENST00000429650 PTPRQQ9UMZ3 2332 aa10.56□□□□□ -0.72
SNRNP200-202ENST00000429650 TRAV8-1A0A0A6YYK1 113 aa10.56□□□□□ -0.72
SNRNP200-202ENST00000429650 DAZAP1Q96EP5 407 aaKnown RBP10.56□□□□□ -0.72
SNRNP200-202ENST00000429650 RASL11BQ9BPW5 248 aa10.56□□□□□ -0.72
SNRNP200-202ENST00000429650 GFRA4Q9GZZ7 299 aa10.56□□□□□ -0.72
SNRNP200-202ENST00000429650 COL6A6A6NMZ7 2263 aa10.56□□□□□ -0.72
SNRNP200-202ENST00000429650 LY6LH3BQJ8 138 aa10.55□□□□□ -0.72
SNRNP200-202ENST00000429650 IGKV1-17P01599 117 aa10.55□□□□□ -0.72
SNRNP200-202ENST00000429650 PLGLAQ15195 96 aa10.55□□□□□ -0.72
SNRNP200-202ENST00000429650 PMCHL1Q16048 86 aa10.55□□□□□ -0.72
SNRNP200-202ENST00000429650 OR8B3Q8NGG8 313 aa10.55□□□□□ -0.72
SNRNP200-202ENST00000429650 OR8B2Q96RD0 313 aa10.55□□□□□ -0.72
SNRNP200-202ENST00000429650 AKAP6Q13023 2319 aa10.55□□□□□ -0.72
SNRNP200-202ENST00000429650 C2orf70A6NJV1 201 aa10.55□□□□□ -0.72
SNRNP200-202ENST00000429650 NPIPB6E9PJ23 425 aa10.55□□□□□ -0.72
SNRNP200-202ENST00000429650 IGLV2-11P01706 119 aa10.55□□□□□ -0.72
SNRNP200-202ENST00000429650 RBPMS2Q6ZRY4 209 aaKnown RBP10.55□□□□□ -0.72
SNRNP200-202ENST00000429650 EXOC3-AS1Q8N2X6 119 aa10.55□□□□□ -0.72
SNRNP200-202ENST00000429650 CIARTQ8N365 385 aaPredicted RBP10.55□□□□□ -0.72
SNRNP200-202ENST00000429650 LINC01560Q8TB33 94 aa10.55□□□□□ -0.72
SNRNP200-202ENST00000429650 RNF5Q99942 180 aa10.55□□□□□ -0.72
SNRNP200-202ENST00000429650 VKORC1Q9BQB6 163 aa10.55□□□□□ -0.72
SNRNP200-202ENST00000429650 HOXB4P17483 251 aaPredicted RBP10.54□□□□□ -0.72
SNRNP200-202ENST00000429650 CD24P25063 80 aa10.54□□□□□ -0.72
SNRNP200-202ENST00000429650 LDLRAD2Q5SZI1 272 aa10.54□□□□□ -0.72
SNRNP200-202ENST00000429650 Q6ZN92 141 aa10.54□□□□□ -0.72
SNRNP200-202ENST00000429650 Q71RC1 249 aaPredicted RBP10.54□□□□□ -0.72
SNRNP200-202ENST00000429650 MUC15Q8N387 334 aa10.54□□□□□ -0.72
SNRNP200-202ENST00000429650 KLHDC1Q8N7A1 406 aa10.54□□□□□ -0.72
SNRNP200-202ENST00000429650 TOX4O94842 621 aa10.54□□□□□ -0.72
SNRNP200-202ENST00000429650 PRB4P10163 310 aaPredicted RBP10.54□□□□□ -0.72
SNRNP200-202ENST00000429650 FOXA3P55318 350 aaPredicted RBP10.54□□□□□ -0.72
SNRNP200-202ENST00000429650 GOLT1AQ6ZVE7 132 aa10.54□□□□□ -0.72
SNRNP200-202ENST00000429650 SRSF8Q9BRL6 282 aaKnown RBP10.54□□□□□ -0.72
SNRNP200-202ENST00000429650 CHD8Q9HCK8 2581 aa10.54□□□□□ -0.72
SNRNP200-202ENST00000429650 SPTBN4Q9H254 2564 aa10.54□□□□□ -0.72
SNRNP200-202ENST00000429650 FAM231BA6NCW3 169 aa10.54□□□□□ -0.72
SNRNP200-202ENST00000429650 K7EIM0 57 aa10.54□□□□□ -0.72
SNRNP200-202ENST00000429650 TIMM23O14925 209 aa10.54□□□□□ -0.72
SNRNP200-202ENST00000429650 COL8A1P27658 744 aa10.54□□□□□ -0.72
SNRNP200-202ENST00000429650 Q56UQ5 140 aa10.54□□□□□ -0.72
SNRNP200-202ENST00000429650 COL5A1-AS1Q5SY13 56 aa10.54□□□□□ -0.72
SNRNP200-202ENST00000429650 PRNTQ86SH4 94 aa10.54□□□□□ -0.72
SNRNP200-202ENST00000429650 KIR3DL3Q8N743 410 aa10.54□□□□□ -0.72
SNRNP200-202ENST00000429650 IGFBPL1Q8WX77 278 aa10.54□□□□□ -0.72
SNRNP200-202ENST00000429650 CNIH1O95406 144 aa10.53□□□□□ -0.72
SNRNP200-202ENST00000429650 HNRNPA3P51991 378 aaKnown RBP10.53□□□□□ -0.72
SNRNP200-202ENST00000429650 FAM120AOSQ5T036 256 aa10.53□□□□□ -0.72
SNRNP200-202ENST00000429650 ONECUT1Q9UBC0 465 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms