RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 MUC3AQ02505 3323 aa11.75□□□□□ -0.53
SYNGAP1-203ENST00000428982 COL6A3P12111 3177 aa11.74□□□□□ -0.53
SYNGAP1-203ENST00000428982 ADIPOQQ15848 244 aa11.74□□□□□ -0.53
SYNGAP1-203ENST00000428982 WFDC3Q8IUB2 231 aa11.74□□□□□ -0.53
SYNGAP1-203ENST00000428982 C18orf15Q96N68 181 aa11.74□□□□□ -0.53
SYNGAP1-203ENST00000428982 RPP21Q9H633 154 aaKnown RBP11.74□□□□□ -0.53
SYNGAP1-203ENST00000428982 RBPMS2Q6ZRY4 209 aaKnown RBP11.74□□□□□ -0.53
SYNGAP1-203ENST00000428982 C3orf56Q8N813 242 aa11.74□□□□□ -0.53
SYNGAP1-203ENST00000428982 IFI27L1Q96BM0 104 aa11.74□□□□□ -0.53
SYNGAP1-203ENST00000428982 NABP2Q9BQ15 211 aa11.74□□□□□ -0.53
SYNGAP1-203ENST00000428982 PRNDQ9UKY0 176 aa11.74□□□□□ -0.53
SYNGAP1-203ENST00000428982 IGHV3-64DA0A0J9YX35 117 aa11.74□□□□□ -0.53
SYNGAP1-203ENST00000428982 IQCF6A8MYZ5 107 aa11.74□□□□□ -0.53
SYNGAP1-203ENST00000428982 TREML4Q6UXN2 200 aa11.74□□□□□ -0.53
SYNGAP1-203ENST00000428982 MGST3O14880 152 aa11.74□□□□□ -0.53
SYNGAP1-203ENST00000428982 Q6ZS92 163 aa11.74□□□□□ -0.53
SYNGAP1-203ENST00000428982 Q6ZT83 130 aa11.74□□□□□ -0.53
SYNGAP1-203ENST00000428982 COL5A1P20908 1838 aaPredicted RBP11.74□□□□□ -0.53
SYNGAP1-203ENST00000428982 IGHV3-43A0A0B4J1X8 118 aa11.73□□□□□ -0.53
SYNGAP1-203ENST00000428982 CCL21O00585 134 aa11.73□□□□□ -0.53
SYNGAP1-203ENST00000428982 AGFG2O95081 481 aa11.73□□□□□ -0.53
SYNGAP1-203ENST00000428982 IGHV3-43DP0DP04 118 aa11.73□□□□□ -0.53
SYNGAP1-203ENST00000428982 ERHP84090 104 aaKnown RBP11.73□□□□□ -0.53
SYNGAP1-203ENST00000428982 FAM57AQ8TBR7 257 aa11.73□□□□□ -0.53
SYNGAP1-203ENST00000428982 VPREB3Q9UKI3 123 aa11.73□□□□□ -0.53
SYNGAP1-203ENST00000428982 C16orf97H3BN30 126 aa11.73□□□□□ -0.53
SYNGAP1-203ENST00000428982 Q6AWC8 147 aa11.73□□□□□ -0.53
SYNGAP1-203ENST00000428982 LCNL1Q6ZST4 164 aa11.73□□□□□ -0.53
SYNGAP1-203ENST00000428982 CXorf67Q86X51 503 aaPredicted RBP11.73□□□□□ -0.53
SYNGAP1-203ENST00000428982 DYSFO75923 2080 aa11.73□□□□□ -0.53
SYNGAP1-203ENST00000428982 DEFB108AA8MXU0 73 aa11.73□□□□□ -0.53
SYNGAP1-203ENST00000428982 POU2AF1Q16633 256 aa11.73□□□□□ -0.53
SYNGAP1-203ENST00000428982 ZNF318Q5VUA4 2279 aa11.73□□□□□ -0.53
SYNGAP1-203ENST00000428982 MBNL2Q5VZF2 373 aaKnown RBP11.73□□□□□ -0.53
SYNGAP1-203ENST00000428982 FAM168AQ92567 244 aa11.73□□□□□ -0.53
SYNGAP1-203ENST00000428982 ZNF747Q9BV97 191 aa11.73□□□□□ -0.53
SYNGAP1-203ENST00000428982 CPAMD8Q8IZJ3 1885 aa11.73□□□□□ -0.53
SYNGAP1-203ENST00000428982 NPIPB6E9PJ23 425 aa11.72□□□□□ -0.53
SYNGAP1-203ENST00000428982 C8orf88P0DMB2 117 aa11.72□□□□□ -0.53
SYNGAP1-203ENST00000428982 CEND1Q8N111 149 aa11.72□□□□□ -0.53
SYNGAP1-203ENST00000428982 RPRMLQ8N4K4 120 aa11.72□□□□□ -0.53
SYNGAP1-203ENST00000428982 Q1RN00 199 aa11.72□□□□□ -0.53
SYNGAP1-203ENST00000428982 C9orf153Q5TBE3 101 aa11.72□□□□□ -0.53
SYNGAP1-203ENST00000428982 ATP6V0E2Q8NHE4 81 aa11.72□□□□□ -0.53
SYNGAP1-203ENST00000428982 K7ENP7 123 aa11.72□□□□□ -0.53
SYNGAP1-203ENST00000428982 ABHD12Q8N2K0 398 aa11.72□□□□□ -0.53
SYNGAP1-203ENST00000428982 C17orf98A8MV24 154 aa11.72□□□□□ -0.53
SYNGAP1-203ENST00000428982 ZNHIT1O43257 154 aa11.72□□□□□ -0.53
SYNGAP1-203ENST00000428982 PRDX2P32119 198 aa11.72□□□□□ -0.53
SYNGAP1-203ENST00000428982 TMEM30BQ3MIR4 351 aa11.72□□□□□ -0.53
SYNGAP1-203ENST00000428982 PDPNQ86YL7 162 aa11.72□□□□□ -0.53
SYNGAP1-203ENST00000428982 ZNF256Q9Y2P7 627 aaPredicted RBP11.72□□□□□ -0.53
SYNGAP1-203ENST00000428982 CEACAM4O75871 244 aa11.71□□□□□ -0.53
SYNGAP1-203ENST00000428982 IGKV1-39P01597 117 aa11.71□□□□□ -0.53
SYNGAP1-203ENST00000428982 IGHG3P01860 377 aa11.71□□□□□ -0.53
SYNGAP1-203ENST00000428982 HBDP02042 147 aa11.71□□□□□ -0.53
SYNGAP1-203ENST00000428982 IGKV1D-39P04432 117 aa11.71□□□□□ -0.53
SYNGAP1-203ENST00000428982 TWIST1Q15672 202 aa11.71□□□□□ -0.53
SYNGAP1-203ENST00000428982 C12orf74Q32Q52 190 aa11.71□□□□□ -0.53
SYNGAP1-203ENST00000428982 LGALS9BQ3B8N2 356 aa11.71□□□□□ -0.53
SYNGAP1-203ENST00000428982 LGALS9CQ6DKI2 356 aa11.71□□□□□ -0.53
SYNGAP1-203ENST00000428982 ZNF295-AS1Q8N0V1 137 aa11.71□□□□□ -0.53
SYNGAP1-203ENST00000428982 C9orf106Q8NAJ2 232 aa11.71□□□□□ -0.53
SYNGAP1-203ENST00000428982 MGST2Q99735 147 aa11.71□□□□□ -0.53
SYNGAP1-203ENST00000428982 SLC25A10Q9UBX3 287 aaPredicted RBP11.71□□□□□ -0.53
SYNGAP1-203ENST00000428982 PCNX3Q9H6A9 2034 aa11.71□□□□□ -0.53
SYNGAP1-203ENST00000428982 TCRBV4S1A1TA0A5B7 111 aa11.71□□□□□ -0.53
SYNGAP1-203ENST00000428982 WT1P19544 449 aaPredicted RBP11.71□□□□□ -0.53
SYNGAP1-203ENST00000428982 ASPHD1Q5U4P2 390 aa11.71□□□□□ -0.53
SYNGAP1-203ENST00000428982 OR10J6PQ8NGY7 276 aa11.71□□□□□ -0.53
SYNGAP1-203ENST00000428982 PRR7Q8TB68 274 aa11.71□□□□□ -0.53
SYNGAP1-203ENST00000428982 PPDPFQ9H3Y8 114 aa11.71□□□□□ -0.53
SYNGAP1-203ENST00000428982 TMEM160Q9NX00 188 aa11.71□□□□□ -0.53
SYNGAP1-203ENST00000428982 FER1L5A0AVI2 2057 aa11.71□□□□□ -0.54
SYNGAP1-203ENST00000428982 PEX7O00628 323 aa11.71□□□□□ -0.54
SYNGAP1-203ENST00000428982 SS18L1O75177 396 aaPredicted RBP11.71□□□□□ -0.54
SYNGAP1-203ENST00000428982 RPL13AP40429 203 aaKnown RBP11.71□□□□□ -0.54
SYNGAP1-203ENST00000428982 MYO15AQ9UKN7 3530 aa11.7□□□□□ -0.54
SYNGAP1-203ENST00000428982 MRPL23Q16540 153 aaKnown RBP11.7□□□□□ -0.54
SYNGAP1-203ENST00000428982 RRN3P1Q2M238 152 aa11.7□□□□□ -0.54
SYNGAP1-203ENST00000428982 OR1L8Q8NGR8 309 aa11.7□□□□□ -0.54
SYNGAP1-203ENST00000428982 PAXXQ9BUH6 204 aa11.7□□□□□ -0.54
SYNGAP1-203ENST00000428982 IGFL3Q6UXB1 125 aa11.7□□□□□ -0.54
SYNGAP1-203ENST00000428982 SSUH2Q9Y2M2 353 aa11.7□□□□□ -0.54
SYNGAP1-203ENST00000428982 C20orf204Q6ZNR8 217 aa11.7□□□□□ -0.54
SYNGAP1-203ENST00000428982 FZR1Q9UM11 496 aa11.7□□□□□ -0.54
SYNGAP1-203ENST00000428982 EPDR1Q9UM22 224 aa11.7□□□□□ -0.54
SYNGAP1-203ENST00000428982 TRAV8-4A0A0B4J246 113 aa11.69□□□□□ -0.54
SYNGAP1-203ENST00000428982 HSPE1P61604 102 aaKnown RBP11.69□□□□□ -0.54
SYNGAP1-203ENST00000428982 FAM90A1Q86YD7 464 aa11.69□□□□□ -0.54
SYNGAP1-203ENST00000428982 OR1L4Q8NGR5 311 aa11.69□□□□□ -0.54
SYNGAP1-203ENST00000428982 KLF14Q8TD94 323 aaPredicted RBP11.69□□□□□ -0.54
SYNGAP1-203ENST00000428982 RASL11BQ9BPW5 248 aa11.69□□□□□ -0.54
SYNGAP1-203ENST00000428982 TCF19Q9Y242 345 aa11.69□□□□□ -0.54
SYNGAP1-203ENST00000428982 MED13Q9UHV7 2174 aa11.69□□□□□ -0.54
SYNGAP1-203ENST00000428982 E9PLD3 99 aa11.69□□□□□ -0.54
SYNGAP1-203ENST00000428982 K7EMI3 77 aa11.69□□□□□ -0.54
SYNGAP1-203ENST00000428982 KLF17Q5JT82 389 aaPredicted RBP11.69□□□□□ -0.54
SYNGAP1-203ENST00000428982 GTSCR1Q86UQ5 136 aa11.69□□□□□ -0.54
SYNGAP1-203ENST00000428982 HS3ST6Q96QI5 342 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms