RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 TRBV7-1A0A0A6YYK4 115 aa7.04□□□□□ -1.28
LINCMD1-201ENST00000418518 TRAV41A0A0B4J266 112 aa7.04□□□□□ -1.28
LINCMD1-201ENST00000418518 OR2T8A6NH00 312 aa7.04□□□□□ -1.28
LINCMD1-201ENST00000418518 LINC01548A6NM66 108 aa7.04□□□□□ -1.28
LINCMD1-201ENST00000418518 G3V318 75 aa7.04□□□□□ -1.28
LINCMD1-201ENST00000418518 ZNF253O75346 499 aa7.04□□□□□ -1.28
LINCMD1-201ENST00000418518 LTAP01374 205 aa7.04□□□□□ -1.28
LINCMD1-201ENST00000418518 HOXA5P20719 270 aa7.04□□□□□ -1.28
LINCMD1-201ENST00000418518 HNF1AP20823 631 aa7.04□□□□□ -1.28
LINCMD1-201ENST00000418518 GNG5P63218 68 aa7.04□□□□□ -1.28
LINCMD1-201ENST00000418518 C15orf32Q32M92 178 aa7.04□□□□□ -1.28
LINCMD1-201ENST00000418518 COA6Q5JTJ3 125 aaKnown RBP7.04□□□□□ -1.28
LINCMD1-201ENST00000418518 PRSS57Q6UWY2 283 aa7.04□□□□□ -1.28
LINCMD1-201ENST00000418518 C9orf139Q6ZV77 190 aa7.04□□□□□ -1.28
LINCMD1-201ENST00000418518 TMEM219Q86XT9 240 aa7.04□□□□□ -1.28
LINCMD1-201ENST00000418518 BLNKQ8WV28 456 aa7.04□□□□□ -1.28
LINCMD1-201ENST00000418518 EEF1AKMT3Q96AZ1 226 aa7.04□□□□□ -1.28
LINCMD1-201ENST00000418518 ZNF492Q9P255 531 aa7.04□□□□□ -1.28
LINCMD1-201ENST00000418518 S4R3C0 116 aa7.04□□□□□ -1.28
LINCMD1-201ENST00000418518 ABCA12Q86UK0 2595 aa7.04□□□□□ -1.28
LINCMD1-201ENST00000418518 ZNF320A2RRD8 509 aa7.03□□□□□ -1.28
LINCMD1-201ENST00000418518 H3BUX3 64 aa7.03□□□□□ -1.28
LINCMD1-201ENST00000418518 BMPR1BO00238 502 aa7.03□□□□□ -1.28
LINCMD1-201ENST00000418518 S100A8P05109 93 aa7.03□□□□□ -1.28
LINCMD1-201ENST00000418518 TRGC1P0CF51 173 aa7.03□□□□□ -1.28
LINCMD1-201ENST00000418518 RPL7P18124 248 aaKnown RBP7.03□□□□□ -1.28
LINCMD1-201ENST00000418518 RAB9AP51151 201 aa7.03□□□□□ -1.28
LINCMD1-201ENST00000418518 KRTAP10-9P60411 292 aa7.03□□□□□ -1.28
LINCMD1-201ENST00000418518 ERVFC1-1P60608 527 aa7.03□□□□□ -1.28
LINCMD1-201ENST00000418518 FABP9Q0Z7S8 132 aa7.03□□□□□ -1.28
LINCMD1-201ENST00000418518 OR5I1Q13606 314 aa7.03□□□□□ -1.28
LINCMD1-201ENST00000418518 RPEL1Q2QD12 228 aa7.03□□□□□ -1.28
LINCMD1-201ENST00000418518 BAGE2Q86Y30 109 aa7.03□□□□□ -1.28
LINCMD1-201ENST00000418518 KRTAP1-3Q8IUG1 177 aa7.03□□□□□ -1.28
LINCMD1-201ENST00000418518 LINC00518Q8N0U6 118 aa7.03□□□□□ -1.28
LINCMD1-201ENST00000418518 BCL6BQ8N143 479 aaPredicted RBP7.03□□□□□ -1.28
LINCMD1-201ENST00000418518 LINC00479Q96M42 142 aa7.03□□□□□ -1.28
LINCMD1-201ENST00000418518 GPR82Q96P67 336 aa7.03□□□□□ -1.28
LINCMD1-201ENST00000418518 RABAC1Q9UI14 185 aa7.03□□□□□ -1.28
LINCMD1-201ENST00000418518 A0A087X0K7 114 aa7.02□□□□□ -1.29
LINCMD1-201ENST00000418518 TRAV34A0A0B4J273 112 aa7.02□□□□□ -1.29
LINCMD1-201ENST00000418518 SERTM2A0A1B0GWG4 89 aa7.02□□□□□ -1.29
LINCMD1-201ENST00000418518 SMIM27A0A1W2PRY6 76 aa7.02□□□□□ -1.29
LINCMD1-201ENST00000418518 SH2D7A6NKC9 451 aaPredicted RBP7.02□□□□□ -1.29
LINCMD1-201ENST00000418518 SLC17A3O00476 420 aa7.02□□□□□ -1.29
LINCMD1-201ENST00000418518 IGLV2-11P01706 119 aa7.02□□□□□ -1.29
LINCMD1-201ENST00000418518 IGHV4-31P0DP07 118 aa7.02□□□□□ -1.29
LINCMD1-201ENST00000418518 PPIFP30405 207 aaKnown RBP7.02□□□□□ -1.29
LINCMD1-201ENST00000418518 GPR183P32249 361 aa7.02□□□□□ -1.29
LINCMD1-201ENST00000418518 CDX1P47902 265 aaPredicted RBP7.02□□□□□ -1.29
LINCMD1-201ENST00000418518 UBE2G1P62253 170 aa7.02□□□□□ -1.29
LINCMD1-201ENST00000418518 CFHR3Q02985 330 aa7.02□□□□□ -1.29
LINCMD1-201ENST00000418518 COX19Q49B96 90 aa7.02□□□□□ -1.29
LINCMD1-201ENST00000418518 CT83Q5H943 113 aa7.02□□□□□ -1.29
LINCMD1-201ENST00000418518 IBA57Q5T440 356 aaKnown RBP7.02□□□□□ -1.29
LINCMD1-201ENST00000418518 TOMM20LQ6UXN7 152 aa7.02□□□□□ -1.29
LINCMD1-201ENST00000418518 Q86TA4 180 aa7.02□□□□□ -1.29
LINCMD1-201ENST00000418518 TMEM75Q8N9X5 138 aa7.02□□□□□ -1.29
LINCMD1-201ENST00000418518 SOX21Q9Y651 276 aaPredicted RBP7.02□□□□□ -1.29
LINCMD1-201ENST00000418518 U3KQE9 123 aa7.02□□□□□ -1.29
LINCMD1-201ENST00000418518 CHD6Q8TD26 2715 aa7.02□□□□□ -1.29
LINCMD1-201ENST00000418518 CRYBG3Q68DQ2 2970 aa7.02□□□□□ -1.29
LINCMD1-201ENST00000418518 VPS13CQ709C8 3753 aa7.02□□□□□ -1.29
LINCMD1-201ENST00000418518 CLPSL1A2RUU4 121 aa7.01□□□□□ -1.29
LINCMD1-201ENST00000418518 C19orf71A6NCJ1 209 aa7.01□□□□□ -1.29
LINCMD1-201ENST00000418518 IGHV3-23P01764 117 aa7.01□□□□□ -1.29
LINCMD1-201ENST00000418518 MGST1P10620 155 aaKnown RBP7.01□□□□□ -1.29
LINCMD1-201ENST00000418518 ATP5G2Q06055 141 aa7.01□□□□□ -1.29
LINCMD1-201ENST00000418518 Q5PR19 223 aa7.01□□□□□ -1.29
LINCMD1-201ENST00000418518 C1orf194Q5T5A4 169 aa7.01□□□□□ -1.29
LINCMD1-201ENST00000418518 C16orf54Q6UWD8 224 aa7.01□□□□□ -1.29
LINCMD1-201ENST00000418518 TMEM183AQ8IXX5 376 aa7.01□□□□□ -1.29
LINCMD1-201ENST00000418518 OR5R1Q8NH85 324 aa7.01□□□□□ -1.29
LINCMD1-201ENST00000418518 USMG5Q96IX5 58 aa7.01□□□□□ -1.29
LINCMD1-201ENST00000418518 C17orf77Q96MU5 243 aa7.01□□□□□ -1.29
LINCMD1-201ENST00000418518 PRSS22Q9GZN4 317 aa7.01□□□□□ -1.29
LINCMD1-201ENST00000418518 RNASE7Q9H1E1 156 aaKnown RBP7.01□□□□□ -1.29
LINCMD1-201ENST00000418518 PRDM13Q9H4Q3 707 aa7.01□□□□□ -1.29
LINCMD1-201ENST00000418518 FBLL1A6NHQ2 334 aaKnown RBP7□□□□□ -1.29
LINCMD1-201ENST00000418518 IFITM10A6NMD0 228 aa7□□□□□ -1.29
LINCMD1-201ENST00000418518 NPIPB6E9PJ23 425 aa7□□□□□ -1.29
LINCMD1-201ENST00000418518 H3BTX0 84 aa7□□□□□ -1.29
LINCMD1-201ENST00000418518 GATCO43716 136 aaKnown RBP7□□□□□ -1.29
LINCMD1-201ENST00000418518 IGLV1-40P01703 118 aa7□□□□□ -1.29
LINCMD1-201ENST00000418518 CLEC3BP05452 202 aa7□□□□□ -1.29
LINCMD1-201ENST00000418518 SNRPCP09234 159 aaKnown RBP7□□□□□ -1.29
LINCMD1-201ENST00000418518 SMIM6P0DI80 62 aa7□□□□□ -1.29
LINCMD1-201ENST00000418518 COL8A1P27658 744 aa7□□□□□ -1.29
LINCMD1-201ENST00000418518 NDUFA6P56556 154 aa7□□□□□ -1.29
LINCMD1-201ENST00000418518 RPL19P84098 196 aaKnown RBP7□□□□□ -1.29
LINCMD1-201ENST00000418518 PSG9Q00887 426 aa7□□□□□ -1.29
LINCMD1-201ENST00000418518 RELQ04864 619 aaPredicted RBP7□□□□□ -1.29
LINCMD1-201ENST00000418518 LY6EQ16553 131 aa7□□□□□ -1.29
LINCMD1-201ENST00000418518 RASL11AQ6T310 242 aa7□□□□□ -1.29
LINCMD1-201ENST00000418518 COX8CQ7Z4L0 72 aa7□□□□□ -1.29
LINCMD1-201ENST00000418518 HIST3H2BBQ8N257 126 aa7□□□□□ -1.29
LINCMD1-201ENST00000418518 EXOC3-AS1Q8N2X6 119 aa7□□□□□ -1.29
LINCMD1-201ENST00000418518 NUDT10Q8NFP7 164 aa7□□□□□ -1.29
LINCMD1-201ENST00000418518 CMTM2Q8TAZ6 248 aa7□□□□□ -1.29
LINCMD1-201ENST00000418518 WIPF2Q8TF74 440 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms