RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 KIAA1671Q9BY89 1806 aa9.19□□□□□ -0.94
PTCH1-205ENST00000418258 A0A0A6YYD4 124 aa9.19□□□□□ -0.94
PTCH1-205ENST00000418258 SHISA3A0PJX4 238 aa9.19□□□□□ -0.94
PTCH1-205ENST00000418258 MS4A6AQ9H2W1 248 aa9.19□□□□□ -0.94
PTCH1-205ENST00000418258 LSM4Q9Y4Z0 139 aaKnown RBP9.19□□□□□ -0.94
PTCH1-205ENST00000418258 CGB7P0DN87 165 aa9.19□□□□□ -0.94
PTCH1-205ENST00000418258 CFHR3Q02985 330 aa9.19□□□□□ -0.94
PTCH1-205ENST00000418258 BMPERQ8N8U9 685 aa9.19□□□□□ -0.94
PTCH1-205ENST00000418258 GATA3P23771 443 aa9.19□□□□□ -0.94
PTCH1-205ENST00000418258 NRN1Q9NPD7 142 aa9.19□□□□□ -0.94
PTCH1-205ENST00000418258 A0A087WWC5 75 aa9.19□□□□□ -0.94
PTCH1-205ENST00000418258 A0A1B0GWJ7 208 aa9.19□□□□□ -0.94
PTCH1-205ENST00000418258 H0YJW9 148 aa9.19□□□□□ -0.94
PTCH1-205ENST00000418258 OSTCQ9NRP0 149 aa9.19□□□□□ -0.94
PTCH1-205ENST00000418258 NOTCH4Q99466 2003 aa9.19□□□□□ -0.94
PTCH1-205ENST00000418258 NDUFS8O00217 210 aa9.18□□□□□ -0.94
PTCH1-205ENST00000418258 FNDC4Q9H6D8 234 aaPredicted RBP9.18□□□□□ -0.94
PTCH1-205ENST00000418258 DAD1P61803 113 aa9.18□□□□□ -0.94
PTCH1-205ENST00000418258 RPL32P62910 135 aaKnown RBP9.18□□□□□ -0.94
PTCH1-205ENST00000418258 LYPD2Q6UXB3 125 aa9.18□□□□□ -0.94
PTCH1-205ENST00000418258 ATP5L2Q7Z4Y8 100 aa9.18□□□□□ -0.94
PTCH1-205ENST00000418258 OCC1Q8TAD7 63 aa9.18□□□□□ -0.94
PTCH1-205ENST00000418258 ZMAT4Q9H898 229 aa9.18□□□□□ -0.94
PTCH1-205ENST00000418258 LURAP1LQ8IV03 231 aa9.18□□□□□ -0.94
PTCH1-205ENST00000418258 TRGV9Q99603 122 aa9.18□□□□□ -0.94
PTCH1-205ENST00000418258 K7ENP7 123 aa9.18□□□□□ -0.94
PTCH1-205ENST00000418258 CEP192Q8TEP8 1941 aa9.18□□□□□ -0.94
PTCH1-205ENST00000418258 J3QKU1 62 aa9.18□□□□□ -0.94
PTCH1-205ENST00000418258 PRR30Q53SZ7 412 aaPredicted RBP9.18□□□□□ -0.94
PTCH1-205ENST00000418258 NCR2O95944 276 aa9.18□□□□□ -0.94
PTCH1-205ENST00000418258 GNB1LQ9BYB4 327 aa9.18□□□□□ -0.94
PTCH1-205ENST00000418258 DMRT1Q9Y5R6 373 aa9.18□□□□□ -0.94
PTCH1-205ENST00000418258 TMEM238C9JI98 176 aa9.18□□□□□ -0.94
PTCH1-205ENST00000418258 E7EQL1 145 aa9.18□□□□□ -0.94
PTCH1-205ENST00000418258 ERVH48-1M5A8F1 160 aa9.18□□□□□ -0.94
PTCH1-205ENST00000418258 MDS2Q8NDY4 140 aa9.18□□□□□ -0.94
PTCH1-205ENST00000418258 IFI27L1Q96BM0 104 aa9.18□□□□□ -0.94
PTCH1-205ENST00000418258 TRAV8-4A0A0B4J246 113 aa9.17□□□□□ -0.94
PTCH1-205ENST00000418258 TSKUQ8WUA8 353 aa9.17□□□□□ -0.94
PTCH1-205ENST00000418258 NABP1Q96AH0 204 aa9.17□□□□□ -0.94
PTCH1-205ENST00000418258 NUP210Q8TEM1 1887 aaPredicted RBP9.17□□□□□ -0.94
PTCH1-205ENST00000418258 TRAV13-1A0A0B4J241 112 aa9.17□□□□□ -0.94
PTCH1-205ENST00000418258 GAFA1Q96PS6 74 aa9.17□□□□□ -0.94
PTCH1-205ENST00000418258 RHPN1-AS1Q9BWJ2 59 aa9.17□□□□□ -0.94
PTCH1-205ENST00000418258 SIGLEC9Q9Y336 463 aa9.17□□□□□ -0.94
PTCH1-205ENST00000418258 A0A087WV48 116 aa9.17□□□□□ -0.94
PTCH1-205ENST00000418258 MBD3L4A6NDZ8 208 aaPredicted RBP9.17□□□□□ -0.94
PTCH1-205ENST00000418258 MBD3L3A6NE82 208 aaPredicted RBP9.17□□□□□ -0.94
PTCH1-205ENST00000418258 MBD3L5A6NJ08 208 aaPredicted RBP9.17□□□□□ -0.94
PTCH1-205ENST00000418258 D6R8Y8 96 aa9.17□□□□□ -0.94
PTCH1-205ENST00000418258 H3BUT2 72 aa9.17□□□□□ -0.94
PTCH1-205ENST00000418258 MBD3L2Q8NHZ7 208 aaPredicted RBP9.17□□□□□ -0.94
PTCH1-205ENST00000418258 CHCHD1Q96BP2 118 aaKnown RBP9.17□□□□□ -0.94
PTCH1-205ENST00000418258 DAZ1Q9NQZ3 744 aaKnown RBP9.17□□□□□ -0.94
PTCH1-205ENST00000418258 ERG28Q9UKR5 140 aa9.17□□□□□ -0.94
PTCH1-205ENST00000418258 FREM1Q5H8C1 2179 aa9.17□□□□□ -0.94
PTCH1-205ENST00000418258 Q8TAT8 98 aa9.17□□□□□ -0.94
PTCH1-205ENST00000418258 MGST2Q99735 147 aa9.17□□□□□ -0.94
PTCH1-205ENST00000418258 RNF126Q9BV68 326 aa9.17□□□□□ -0.94
PTCH1-205ENST00000418258 TCRAP04437 139 aa9.17□□□□□ -0.94
PTCH1-205ENST00000418258 ATXN8Q156A1 80 aa9.17□□□□□ -0.94
PTCH1-205ENST00000418258 C9orf139Q6ZV77 190 aa9.17□□□□□ -0.94
PTCH1-205ENST00000418258 RNF5Q99942 180 aa9.17□□□□□ -0.94
PTCH1-205ENST00000418258 TMEM131Q92545 1883 aa9.17□□□□□ -0.94
PTCH1-205ENST00000418258 WNK1Q9H4A3 2382 aa9.17□□□□□ -0.94
PTCH1-205ENST00000418258 ZNF561-AS1K7EIQ3 104 aa9.17□□□□□ -0.94
PTCH1-205ENST00000418258 C1QL4Q86Z23 238 aa9.17□□□□□ -0.94
PTCH1-205ENST00000418258 CSTL1Q9H114 145 aa9.17□□□□□ -0.94
PTCH1-205ENST00000418258 A6NNC1 897 aa9.16□□□□□ -0.94
PTCH1-205ENST00000418258 VCYO14598 125 aa9.16□□□□□ -0.94
PTCH1-205ENST00000418258 TBX6O95947 436 aaPredicted RBP9.16□□□□□ -0.94
PTCH1-205ENST00000418258 DMRTA1Q5VZB9 504 aa9.16□□□□□ -0.94
PTCH1-205ENST00000418258 RASL10AQ92737 203 aa9.16□□□□□ -0.94
PTCH1-205ENST00000418258 C5orf30Q96GV9 206 aa9.16□□□□□ -0.94
PTCH1-205ENST00000418258 PRDM13Q9H4Q3 707 aa9.16□□□□□ -0.94
PTCH1-205ENST00000418258 A0A087WWL8 130 aa9.16□□□□□ -0.94
PTCH1-205ENST00000418258 LEPROTO15243 131 aa9.16□□□□□ -0.94
PTCH1-205ENST00000418258 CRYGSP22914 178 aa9.16□□□□□ -0.94
PTCH1-205ENST00000418258 Q6ZS92 163 aa9.16□□□□□ -0.94
PTCH1-205ENST00000418258 TANC1Q9C0D5 1861 aa9.16□□□□□ -0.94
PTCH1-205ENST00000418258 LINC01549A6NIU2 74 aa9.16□□□□□ -0.94
PTCH1-205ENST00000418258 ITGB1BP1O14713 200 aa9.16□□□□□ -0.94
PTCH1-205ENST00000418258 HOXD3P31249 432 aaPredicted RBP9.16□□□□□ -0.94
PTCH1-205ENST00000418258 APOC4P55056 127 aa9.16□□□□□ -0.94
PTCH1-205ENST00000418258 DEFB131AP59861 70 aa9.16□□□□□ -0.94
PTCH1-205ENST00000418258 TREML4Q6UXN2 200 aa9.16□□□□□ -0.94
PTCH1-205ENST00000418258 MRAPQ8TCY5 172 aa9.16□□□□□ -0.94
PTCH1-205ENST00000418258 MED12LQ86YW9 2145 aa9.16□□□□□ -0.94
PTCH1-205ENST00000418258 HIST1H4AP62805 103 aaKnown RBP9.16□□□□□ -0.94
PTCH1-205ENST00000418258 GGTLC1Q9BX51 225 aa9.16□□□□□ -0.94
PTCH1-205ENST00000418258 IGFL4Q6B9Z1 124 aa9.16□□□□□ -0.94
PTCH1-205ENST00000418258 C14orf178Q8N769 122 aaPredicted RBP9.16□□□□□ -0.94
PTCH1-205ENST00000418258 DERL1Q9BUN8 251 aa9.16□□□□□ -0.94
PTCH1-205ENST00000418258 LINC01619G3V211 115 aa9.15□□□□□ -0.94
PTCH1-205ENST00000418258 SH2D1AO60880 128 aa9.15□□□□□ -0.94
PTCH1-205ENST00000418258 TRAV3A0A0B4J244 114 aa9.15□□□□□ -0.94
PTCH1-205ENST00000418258 MST1P26927 711 aa9.15□□□□□ -0.94
PTCH1-205ENST00000418258 SEC11AP67812 179 aa9.15□□□□□ -0.94
PTCH1-205ENST00000418258 LGALS1P09382 135 aaKnown RBP9.15□□□□□ -0.94
PTCH1-205ENST00000418258 SSBP2P81877 361 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms