RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 MC5RP33032 325 aa10.24□□□□□ -0.77
LRRTM1-205ENST00000417012 LINC00311Q8N616 119 aa10.24□□□□□ -0.77
LRRTM1-205ENST00000417012 SCNM1Q9BWG6 230 aa10.24□□□□□ -0.77
LRRTM1-205ENST00000417012 HSPB8Q9UJY1 196 aa10.24□□□□□ -0.77
LRRTM1-205ENST00000417012 PET117Q6UWS5 81 aa10.23□□□□□ -0.77
LRRTM1-205ENST00000417012 C12orf54Q6X4T0 127 aa10.23□□□□□ -0.77
LRRTM1-205ENST00000417012 Q86TA4 180 aa10.23□□□□□ -0.77
LRRTM1-205ENST00000417012 NUP37Q8NFH4 326 aa10.23□□□□□ -0.77
LRRTM1-205ENST00000417012 IGF2RP11717 2491 aa10.23□□□□□ -0.77
LRRTM1-205ENST00000417012 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.23□□□□□ -0.77
LRRTM1-205ENST00000417012 FCN3O75636 299 aa10.23□□□□□ -0.77
LRRTM1-205ENST00000417012 RUSC1-AS1Q66K80 236 aa10.23□□□□□ -0.77
LRRTM1-205ENST00000417012 C8orf31Q8N9H6 132 aa10.23□□□□□ -0.77
LRRTM1-205ENST00000417012 TMEM116Q8NCL8 245 aa10.23□□□□□ -0.77
LRRTM1-205ENST00000417012 C8orf46Q8TAG6 207 aa10.23□□□□□ -0.77
LRRTM1-205ENST00000417012 CCL17Q92583 94 aa10.23□□□□□ -0.77
LRRTM1-205ENST00000417012 TPRP12270 2363 aaKnown RBP10.23□□□□□ -0.77
LRRTM1-205ENST00000417012 IGHV3-21A0A0B4J1V1 117 aa10.23□□□□□ -0.77
LRRTM1-205ENST00000417012 C17orf100A8MU93 164 aa10.23□□□□□ -0.77
LRRTM1-205ENST00000417012 H0Y8G0 127 aa10.23□□□□□ -0.77
LRRTM1-205ENST00000417012 NDUFB3O43676 98 aa10.23□□□□□ -0.77
LRRTM1-205ENST00000417012 HTR1DP28221 377 aa10.23□□□□□ -0.77
LRRTM1-205ENST00000417012 RPL27AP46776 148 aaKnown RBP10.23□□□□□ -0.77
LRRTM1-205ENST00000417012 LGALS7P47929 136 aa10.23□□□□□ -0.77
LRRTM1-205ENST00000417012 BVES-AS1Q5T3Y7 98 aa10.23□□□□□ -0.77
LRRTM1-205ENST00000417012 GSX1Q9H4S2 264 aaPredicted RBP10.23□□□□□ -0.77
LRRTM1-205ENST00000417012 HIGD1AQ9Y241 93 aa10.23□□□□□ -0.77
LRRTM1-205ENST00000417012 CSMD1Q96PZ7 3565 aa10.22□□□□□ -0.77
LRRTM1-205ENST00000417012 PPIAL4EA0A075B759 164 aa10.22□□□□□ -0.77
LRRTM1-205ENST00000417012 NPIPB6E9PJ23 425 aa10.22□□□□□ -0.77
LRRTM1-205ENST00000417012 PPIAL4DF5H284 164 aa10.22□□□□□ -0.77
LRRTM1-205ENST00000417012 PPIAL4FP0DN26 164 aa10.22□□□□□ -0.77
LRRTM1-205ENST00000417012 OTORQ9NRC9 128 aa10.22□□□□□ -0.77
LRRTM1-205ENST00000417012 TRAV8-1A0A0A6YYK1 113 aa10.22□□□□□ -0.77
LRRTM1-205ENST00000417012 HAX1O00165 279 aa10.22□□□□□ -0.77
LRRTM1-205ENST00000417012 APELAP0DMC3 54 aa10.22□□□□□ -0.77
LRRTM1-205ENST00000417012 BMI1P35226 326 aa10.22□□□□□ -0.77
LRRTM1-205ENST00000417012 ERASQ7Z444 233 aa10.22□□□□□ -0.77
LRRTM1-205ENST00000417012 CIARTQ8N365 385 aaPredicted RBP10.22□□□□□ -0.77
LRRTM1-205ENST00000417012 IGHV3-72A0A0B4J1Y9 119 aa10.21□□□□□ -0.77
LRRTM1-205ENST00000417012 TAX1BP3O14907 124 aa10.21□□□□□ -0.77
LRRTM1-205ENST00000417012 ZNF138P52744 262 aa10.21□□□□□ -0.77
LRRTM1-205ENST00000417012 PLP1P60201 277 aa10.21□□□□□ -0.77
LRRTM1-205ENST00000417012 LYZP61626 148 aa10.21□□□□□ -0.77
LRRTM1-205ENST00000417012 PRNTQ86SH4 94 aa10.21□□□□□ -0.77
LRRTM1-205ENST00000417012 RITA1Q96K30 269 aa10.21□□□□□ -0.77
LRRTM1-205ENST00000417012 MS4A6AQ9H2W1 248 aa10.21□□□□□ -0.77
LRRTM1-205ENST00000417012 SCRT2Q9NQ03 307 aa10.21□□□□□ -0.77
LRRTM1-205ENST00000417012 TIMM8BQ9Y5J9 83 aaPredicted RBP10.21□□□□□ -0.77
LRRTM1-205ENST00000417012 PLXNB1O43157 2135 aa10.21□□□□□ -0.77
LRRTM1-205ENST00000417012 CSN3P07498 182 aa10.21□□□□□ -0.78
LRRTM1-205ENST00000417012 PVRIGQ6DKI7 326 aa10.21□□□□□ -0.78
LRRTM1-205ENST00000417012 DEFB125Q8N687 156 aa10.21□□□□□ -0.78
LRRTM1-205ENST00000417012 TEX45Q8NA69 505 aa10.21□□□□□ -0.78
LRRTM1-205ENST00000417012 MUC21A0A0G2JKD1 596 aa10.2□□□□□ -0.78
LRRTM1-205ENST00000417012 MUC21A0A140T8X8 626 aa10.2□□□□□ -0.78
LRRTM1-205ENST00000417012 HLA-DRB1P01911 266 aa10.2□□□□□ -0.78
LRRTM1-205ENST00000417012 RHOGP84095 191 aa10.2□□□□□ -0.78
LRRTM1-205ENST00000417012 MRGPRG-AS1Q2M3A8 158 aa10.2□□□□□ -0.78
LRRTM1-205ENST00000417012 MUC21Q5SSG8 566 aa10.2□□□□□ -0.78
LRRTM1-205ENST00000417012 CFAP161Q6P656 301 aa10.2□□□□□ -0.78
LRRTM1-205ENST00000417012 LYPD2Q6UXB3 125 aa10.2□□□□□ -0.78
LRRTM1-205ENST00000417012 GOLT1AQ6ZVE7 132 aa10.2□□□□□ -0.78
LRRTM1-205ENST00000417012 ATRXP46100 2492 aa10.2□□□□□ -0.78
LRRTM1-205ENST00000417012 SVEP1Q4LDE5 3571 aa10.2□□□□□ -0.78
LRRTM1-205ENST00000417012 TOX4O94842 621 aa10.2□□□□□ -0.78
LRRTM1-205ENST00000417012 MCRIP2Q9BUT9 160 aaKnown RBP10.2□□□□□ -0.78
LRRTM1-205ENST00000417012 TMUB1Q9BVT8 246 aa10.2□□□□□ -0.78
LRRTM1-205ENST00000417012 ABCA4P78363 2273 aa10.2□□□□□ -0.78
LRRTM1-205ENST00000417012 A0A1B0GUT8 65 aa10.2□□□□□ -0.78
LRRTM1-205ENST00000417012 TMEM178BH3BS89 294 aa10.2□□□□□ -0.78
LRRTM1-205ENST00000417012 HIST1H1AQ02539 215 aaPredicted RBP10.2□□□□□ -0.78
LRRTM1-205ENST00000417012 APOHP02749 345 aaPredicted RBP10.19□□□□□ -0.78
LRRTM1-205ENST00000417012 LDLRAD2Q5SZI1 272 aa10.19□□□□□ -0.78
LRRTM1-205ENST00000417012 EXOC3-AS1Q8N2X6 119 aa10.19□□□□□ -0.78
LRRTM1-205ENST00000417012 AP5S1Q9NUS5 200 aa10.19□□□□□ -0.78
LRRTM1-205ENST00000417012 JKAMPQ9P055 326 aa10.19□□□□□ -0.78
LRRTM1-205ENST00000417012 OR2T8A6NH00 312 aa10.19□□□□□ -0.78
LRRTM1-205ENST00000417012 RIGQ13278 110 aa10.19□□□□□ -0.78
LRRTM1-205ENST00000417012 SLC25A39Q9BZJ4 359 aaPredicted RBP10.19□□□□□ -0.78
LRRTM1-205ENST00000417012 TMEM14CQ9P0S9 112 aa10.19□□□□□ -0.78
LRRTM1-205ENST00000417012 PSG1P11464 419 aa10.18□□□□□ -0.78
LRRTM1-205ENST00000417012 LOXP28300 417 aaPredicted RBP10.18□□□□□ -0.78
LRRTM1-205ENST00000417012 RIPPLY3P57055 190 aa10.18□□□□□ -0.78
LRRTM1-205ENST00000417012 RPS20P60866 119 aaKnown RBP10.18□□□□□ -0.78
LRRTM1-205ENST00000417012 LINC01545Q5VT33 79 aa10.18□□□□□ -0.78
LRRTM1-205ENST00000417012 SRSF12Q8WXF0 261 aaKnown RBP10.18□□□□□ -0.78
LRRTM1-205ENST00000417012 PMCHL2Q9BQD1 86 aa10.18□□□□□ -0.78
LRRTM1-205ENST00000417012 F11RQ9Y624 299 aaKnown RBP10.18□□□□□ -0.78
LRRTM1-205ENST00000417012 CSTL1Q9H114 145 aa10.18□□□□□ -0.78
LRRTM1-205ENST00000417012 IGLV2-11P01706 119 aa10.17□□□□□ -0.78
LRRTM1-205ENST00000417012 IGHV1-8P0DP01 117 aa10.17□□□□□ -0.78
LRRTM1-205ENST00000417012 CSN1S1P47710 185 aa10.17□□□□□ -0.78
LRRTM1-205ENST00000417012 ARF6P62330 175 aa10.17□□□□□ -0.78
LRRTM1-205ENST00000417012 PAX2Q02962 417 aa10.17□□□□□ -0.78
LRRTM1-205ENST00000417012 TMEM155Q4W5P6 130 aa10.17□□□□□ -0.78
LRRTM1-205ENST00000417012 FA2HQ7L5A8 372 aa10.17□□□□□ -0.78
LRRTM1-205ENST00000417012 NEU4Q8WWR8 484 aaPredicted RBP10.17□□□□□ -0.78
LRRTM1-205ENST00000417012 CTSZQ9UBR2 303 aa10.17□□□□□ -0.78
LRRTM1-205ENST00000417012 SPTBN4Q9H254 2564 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 840.2 ms