RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 LSM7Q9UK45 103 aaKnown RBP4.16□□□□□ -1.74
HERC4-205ENST00000412272 TRAV2A0A0B4J234 112 aa4.15□□□□□ -1.74
HERC4-205ENST00000412272 hADV29S1A0JD25 119 aa4.15□□□□□ -1.74
HERC4-205ENST00000412272 C19orf71A6NCJ1 209 aa4.15□□□□□ -1.74
HERC4-205ENST00000412272 ADM5C9JUS6 153 aa4.15□□□□□ -1.74
HERC4-205ENST00000412272 MGST3O14880 152 aa4.15□□□□□ -1.74
HERC4-205ENST00000412272 IGLV2-8P01709 118 aa4.15□□□□□ -1.74
HERC4-205ENST00000412272 FXYD4P59646 89 aa4.15□□□□□ -1.74
HERC4-205ENST00000412272 RPL30P62888 115 aaKnown RBP4.15□□□□□ -1.74
HERC4-205ENST00000412272 DGAT2L6Q6ZPD8 337 aa4.15□□□□□ -1.74
HERC4-205ENST00000412272 ZNF524Q96C55 264 aa4.15□□□□□ -1.74
HERC4-205ENST00000412272 AGPAT4-IT1Q9H0P7 198 aa4.15□□□□□ -1.74
HERC4-205ENST00000412272 RPUSD1Q9UJJ7 312 aaKnown RBP4.15□□□□□ -1.74
HERC4-205ENST00000412272 WDR83OSQ9Y284 106 aa4.15□□□□□ -1.74
HERC4-205ENST00000412272 SPTBP11277 2137 aa4.15□□□□□ -1.74
HERC4-205ENST00000412272 BRCA2P51587 3418 aa4.15□□□□□ -1.74
HERC4-205ENST00000412272 LINC01619G3V211 115 aa4.15□□□□□ -1.75
HERC4-205ENST00000412272 H3BP45 60 aa4.15□□□□□ -1.75
HERC4-205ENST00000412272 TIMM23O14925 209 aa4.15□□□□□ -1.75
HERC4-205ENST00000412272 DPM2O94777 84 aa4.15□□□□□ -1.75
HERC4-205ENST00000412272 IGKV1-39P01597 117 aa4.15□□□□□ -1.75
HERC4-205ENST00000412272 TRACP01848 142 aa4.15□□□□□ -1.75
HERC4-205ENST00000412272 IGKV1D-39P04432 117 aa4.15□□□□□ -1.75
HERC4-205ENST00000412272 PMS2CLQ68D20 193 aa4.15□□□□□ -1.75
HERC4-205ENST00000412272 ZFP2Q6ZN57 461 aa4.15□□□□□ -1.75
HERC4-205ENST00000412272 TMEM52Q8NDY8 209 aa4.15□□□□□ -1.75
HERC4-205ENST00000412272 NABP1Q96AH0 204 aa4.15□□□□□ -1.75
HERC4-205ENST00000412272 EPDR1Q9UM22 224 aa4.15□□□□□ -1.75
HERC4-205ENST00000412272 TRBV25-1A0A075B6N4 114 aa4.15□□□□□ -1.75
HERC4-205ENST00000412272 TRAV13-1A0A0B4J241 112 aa4.15□□□□□ -1.75
HERC4-205ENST00000412272 GCHFRP30047 84 aa4.15□□□□□ -1.75
HERC4-205ENST00000412272 PSMB2P49721 201 aa4.15□□□□□ -1.75
HERC4-205ENST00000412272 FXYD3Q14802 87 aa4.15□□□□□ -1.75
HERC4-205ENST00000412272 LGALS9BQ3B8N2 356 aa4.15□□□□□ -1.75
HERC4-205ENST00000412272 LGALS9CQ6DKI2 356 aa4.15□□□□□ -1.75
HERC4-205ENST00000412272 Q6ZRM9 215 aa4.15□□□□□ -1.75
HERC4-205ENST00000412272 AMN1Q8IY45 258 aa4.15□□□□□ -1.75
HERC4-205ENST00000412272 NEXN-AS1Q8NBZ9 246 aa4.15□□□□□ -1.75
HERC4-205ENST00000412272 LINC01600Q96MT4 127 aa4.15□□□□□ -1.75
HERC4-205ENST00000412272 LSM4Q9Y4Z0 139 aaKnown RBP4.15□□□□□ -1.75
HERC4-205ENST00000412272 CEP192Q8TEP8 1941 aa4.14□□□□□ -1.75
HERC4-205ENST00000412272 DEFA4P12838 97 aa4.14□□□□□ -1.75
HERC4-205ENST00000412272 PSMB8P28062 276 aa4.14□□□□□ -1.75
HERC4-205ENST00000412272 RITA1Q96K30 269 aa4.14□□□□□ -1.75
HERC4-205ENST00000412272 BMFQ96LC9 184 aa4.14□□□□□ -1.75
HERC4-205ENST00000412272 RNF181Q9P0P0 153 aa4.14□□□□□ -1.75
HERC4-205ENST00000412272 IGKV2D-26A0A0A0MRZ7 120 aa4.14□□□□□ -1.75
HERC4-205ENST00000412272 IGKV1-5P01602 117 aa4.14□□□□□ -1.75
HERC4-205ENST00000412272 ZNF883P0CG24 379 aa4.14□□□□□ -1.75
HERC4-205ENST00000412272 KRTAP27-1Q3LI81 207 aa4.14□□□□□ -1.75
HERC4-205ENST00000412272 C10orf105Q8TEF2 133 aa4.14□□□□□ -1.75
HERC4-205ENST00000412272 SPACA5Q96QH8 159 aa4.14□□□□□ -1.75
HERC4-205ENST00000412272 PRRG4Q9BZD6 226 aa4.14□□□□□ -1.75
HERC4-205ENST00000412272 IMUPQ9GZP8 106 aa4.14□□□□□ -1.75
HERC4-205ENST00000412272 LINC00527Q9UJ94 153 aa4.14□□□□□ -1.75
HERC4-205ENST00000412272 H7C1H1 209 aa4.14□□□□□ -1.75
HERC4-205ENST00000412272 IGKCP01834 107 aa4.14□□□□□ -1.75
HERC4-205ENST00000412272 ATP5G1P05496 136 aa4.14□□□□□ -1.75
HERC4-205ENST00000412272 GFERP55789 205 aa4.14□□□□□ -1.75
HERC4-205ENST00000412272 Q8N1Y9 231 aa4.14□□□□□ -1.75
HERC4-205ENST00000412272 UPK3BQ9BT76 320 aa4.14□□□□□ -1.75
HERC4-205ENST00000412272 SPANXDQ9BXN6 97 aa4.14□□□□□ -1.75
HERC4-205ENST00000412272 TANC2Q9HCD6 1990 aa4.14□□□□□ -1.75
HERC4-205ENST00000412272 IGKV1D-43A0A0B4J1Z2 117 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 IGLV2-14P01704 120 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 PMAIP1Q13794 54 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 CT83Q5H943 113 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 LYRM7Q5U5X0 104 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 WDR31Q8NA23 367 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 Q8NA96 180 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 WFDC11Q8NEX6 87 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 TTTY13Q9BZ97 58 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 OCIAD1Q9NX40 245 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 IL36RNQ9UBH0 155 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 RAI1Q7Z5J4 1906 aaPredicted RBP4.13□□□□□ -1.75
HERC4-205ENST00000412272 TRAV8-4A0A0B4J246 113 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 TMEM150CB9EJG8 249 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 SCGB1C2P0DMR2 95 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 CD52P31358 61 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 LINC00596Q86U02 117 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 C1orf158Q8N1D5 194 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 DPH3P1Q9H4G8 78 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 HCSTQ9UBK5 93 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 C19orf25Q9UFG5 118 aaPredicted RBP4.13□□□□□ -1.75
HERC4-205ENST00000412272 WT1P19544 449 aaPredicted RBP4.13□□□□□ -1.75
HERC4-205ENST00000412272 LEPP41159 167 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 SFTPA2Q8IWL1 248 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 SFTPA1Q8IWL2 248 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 MRPL53Q96EL3 112 aaKnown RBP4.13□□□□□ -1.75
HERC4-205ENST00000412272 CACNG5Q9UF02 275 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 TRBV7-3A0A075B6L6 115 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 IGKV1D-13A0A0B4J2D9 117 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 PRSS46E5RG02 174 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 IGKV1-13P0DP09 117 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 RPL13AP40429 203 aaKnown RBP4.13□□□□□ -1.75
HERC4-205ENST00000412272 TFF3Q07654 80 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 FAM182BQ5T319 152 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 PLXDC1Q8IUK5 500 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 C11orf53Q8IXP5 236 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 FAM168AQ92567 244 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms