RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 LCNL1Q6ZST4 164 aa10.24□□□□□ -0.77
HERC3-203ENST00000407637 SLC25A48Q6ZT89 311 aaKnown RBP10.24□□□□□ -0.77
HERC3-203ENST00000407637 Q86TA4 180 aa10.24□□□□□ -0.77
HERC3-203ENST00000407637 MDP1Q86V88 176 aa10.24□□□□□ -0.77
HERC3-203ENST00000407637 DLL1O00548 723 aa10.23□□□□□ -0.77
HERC3-203ENST00000407637 COX6A1P12074 109 aa10.23□□□□□ -0.77
HERC3-203ENST00000407637 RRN3P1Q2M238 152 aa10.23□□□□□ -0.77
HERC3-203ENST00000407637 ASCL2Q99929 193 aa10.23□□□□□ -0.77
HERC3-203ENST00000407637 OBP2BQ9NPH6 170 aa10.23□□□□□ -0.77
HERC3-203ENST00000407637 IGKV3D-15A0A087WSY6 115 aa10.23□□□□□ -0.77
HERC3-203ENST00000407637 LTBRP36941 435 aa10.23□□□□□ -0.77
HERC3-203ENST00000407637 PRNTQ86SH4 94 aa10.23□□□□□ -0.77
HERC3-203ENST00000407637 SMIM20Q8N5G0 67 aa10.23□□□□□ -0.77
HERC3-203ENST00000407637 SMRP1Q8NCR6 262 aa10.23□□□□□ -0.77
HERC3-203ENST00000407637 CRISPLD2Q9H0B8 497 aa10.23□□□□□ -0.77
HERC3-203ENST00000407637 PRSS29PA6NIE9 313 aa10.22□□□□□ -0.77
HERC3-203ENST00000407637 BRI3O95415 125 aa10.22□□□□□ -0.77
HERC3-203ENST00000407637 SAA2P0DJI9 122 aaPredicted RBP10.22□□□□□ -0.77
HERC3-203ENST00000407637 PRB4P10163 310 aaPredicted RBP10.22□□□□□ -0.77
HERC3-203ENST00000407637 SMCPP49901 116 aaPredicted RBP10.22□□□□□ -0.77
HERC3-203ENST00000407637 SRSF6Q13247 344 aaKnown RBP10.22□□□□□ -0.77
HERC3-203ENST00000407637 MRPL14Q6P1L8 145 aaKnown RBP10.22□□□□□ -0.77
HERC3-203ENST00000407637 GTSCR1Q86UQ5 136 aa10.22□□□□□ -0.77
HERC3-203ENST00000407637 C11orf53Q8IXP5 236 aa10.22□□□□□ -0.77
HERC3-203ENST00000407637 IMMP1LQ96LU5 166 aa10.22□□□□□ -0.77
HERC3-203ENST00000407637 LOXL3P58215 753 aa10.22□□□□□ -0.77
HERC3-203ENST00000407637 PAX8Q06710 450 aa10.22□□□□□ -0.77
HERC3-203ENST00000407637 OR1L8Q8NGR8 309 aa10.22□□□□□ -0.77
HERC3-203ENST00000407637 CACNG8Q8WXS5 425 aa10.22□□□□□ -0.77
HERC3-203ENST00000407637 PRR14LQ5THK1 2151 aa10.22□□□□□ -0.77
HERC3-203ENST00000407637 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.21□□□□□ -0.77
HERC3-203ENST00000407637 FAM90A27PA6NNH2 459 aa10.21□□□□□ -0.77
HERC3-203ENST00000407637 ORM2P19652 201 aa10.21□□□□□ -0.77
HERC3-203ENST00000407637 TMEM240Q5SV17 173 aa10.21□□□□□ -0.77
HERC3-203ENST00000407637 Q6AWC8 147 aa10.21□□□□□ -0.77
HERC3-203ENST00000407637 ZNF562Q6V9R5 426 aa10.21□□□□□ -0.77
HERC3-203ENST00000407637 CD177Q8N6Q3 437 aa10.21□□□□□ -0.77
HERC3-203ENST00000407637 RBMXL3Q8N7X1 1067 aaKnown RBP10.21□□□□□ -0.77
HERC3-203ENST00000407637 GATD1Q8NB37 220 aa10.21□□□□□ -0.77
HERC3-203ENST00000407637 PRR7Q8TB68 274 aa10.21□□□□□ -0.77
HERC3-203ENST00000407637 NPIPB3Q92617 1050 aa10.21□□□□□ -0.77
HERC3-203ENST00000407637 Q9H3A6 140 aa10.21□□□□□ -0.77
HERC3-203ENST00000407637 HHLA3Q9XRX5 114 aa10.21□□□□□ -0.77
HERC3-203ENST00000407637 PINLYPA6NC86 204 aa10.21□□□□□ -0.78
HERC3-203ENST00000407637 UPK2O00526 184 aa10.21□□□□□ -0.78
HERC3-203ENST00000407637 RBP4P02753 201 aa10.21□□□□□ -0.78
HERC3-203ENST00000407637 CD27P26842 260 aa10.21□□□□□ -0.78
HERC3-203ENST00000407637 ABHD17BQ5VST6 288 aa10.21□□□□□ -0.78
HERC3-203ENST00000407637 AMN1Q8IY45 258 aa10.21□□□□□ -0.78
HERC3-203ENST00000407637 ZNF318Q5VUA4 2279 aa10.21□□□□□ -0.78
HERC3-203ENST00000407637 IGKV1D-37A0A075B6S9 117 aa10.2□□□□□ -0.78
HERC3-203ENST00000407637 IGHV1OR15-9A0A0B4J2B8 117 aa10.2□□□□□ -0.78
HERC3-203ENST00000407637 FCER1GP30273 86 aa10.2□□□□□ -0.78
HERC3-203ENST00000407637 RPL32P62910 135 aaKnown RBP10.2□□□□□ -0.78
HERC3-203ENST00000407637 ODF1Q14990 250 aa10.2□□□□□ -0.78
HERC3-203ENST00000407637 CFAP126Q5VTH2 177 aa10.2□□□□□ -0.78
HERC3-203ENST00000407637 ATP6V0E2Q8NHE4 81 aa10.2□□□□□ -0.78
HERC3-203ENST00000407637 FAM173AQ9BQD7 235 aa10.2□□□□□ -0.78
HERC3-203ENST00000407637 ZNF785A8K8V0 405 aa10.2□□□□□ -0.78
HERC3-203ENST00000407637 SMKR1H3BMG3 65 aa10.2□□□□□ -0.78
HERC3-203ENST00000407637 C1orf122Q6ZSJ8 110 aa10.2□□□□□ -0.78
HERC3-203ENST00000407637 PIFOQ8TCI5 191 aa10.2□□□□□ -0.78
HERC3-203ENST00000407637 MRPL36Q9P0J6 103 aaKnown RBP10.2□□□□□ -0.78
HERC3-203ENST00000407637 INTS1Q8N201 2190 aaKnown RBP10.2□□□□□ -0.78
HERC3-203ENST00000407637 TMEM213A2RRL7 107 aa10.2□□□□□ -0.78
HERC3-203ENST00000407637 IGKV1-16P04430 117 aa10.2□□□□□ -0.78
HERC3-203ENST00000407637 MPV17P39210 176 aa10.2□□□□□ -0.78
HERC3-203ENST00000407637 TBC1D28Q2M2D7 210 aa10.2□□□□□ -0.78
HERC3-203ENST00000407637 ANXA2RQ3ZCQ2 193 aa10.2□□□□□ -0.78
HERC3-203ENST00000407637 SLC25A45Q8N413 288 aa10.2□□□□□ -0.78
HERC3-203ENST00000407637 PTH2Q96A98 100 aa10.2□□□□□ -0.78
HERC3-203ENST00000407637 PLXNB1O43157 2135 aa10.19□□□□□ -0.78
HERC3-203ENST00000407637 NXPH1P58417 271 aa10.19□□□□□ -0.78
HERC3-203ENST00000407637 GOLT1AQ6ZVE7 132 aa10.19□□□□□ -0.78
HERC3-203ENST00000407637 ORMDL3Q8N138 153 aa10.19□□□□□ -0.78
HERC3-203ENST00000407637 RND1Q92730 232 aa10.19□□□□□ -0.78
HERC3-203ENST00000407637 C12orf49Q9H741 205 aa10.19□□□□□ -0.78
HERC3-203ENST00000407637 NHLRC4P0CG21 123 aaPredicted RBP10.19□□□□□ -0.78
HERC3-203ENST00000407637 ZC2HC1BQ5TFG8 222 aa10.19□□□□□ -0.78
HERC3-203ENST00000407637 ZFAND6Q6FIF0 208 aa10.19□□□□□ -0.78
HERC3-203ENST00000407637 MAPKAPK5-AS1Q8N8E1 139 aa10.19□□□□□ -0.78
HERC3-203ENST00000407637 LINC01548A6NM66 108 aa10.18□□□□□ -0.78
HERC3-203ENST00000407637 IQCF6A8MYZ5 107 aa10.18□□□□□ -0.78
HERC3-203ENST00000407637 IGKCP01834 107 aa10.18□□□□□ -0.78
HERC3-203ENST00000407637 KLF17Q5JT82 389 aaPredicted RBP10.18□□□□□ -0.78
HERC3-203ENST00000407637 HIST1H4GQ99525 98 aa10.18□□□□□ -0.78
HERC3-203ENST00000407637 U3KQK5 164 aa10.18□□□□□ -0.78
HERC3-203ENST00000407637 URB1O60287 2271 aaKnown RBP10.18□□□□□ -0.78
HERC3-203ENST00000407637 DSCAML1Q8TD84 2053 aa10.18□□□□□ -0.78
HERC3-203ENST00000407637 A0A1B0GW15 77 aa10.18□□□□□ -0.78
HERC3-203ENST00000407637 VSTM5A8MXK1 200 aa10.18□□□□□ -0.78
HERC3-203ENST00000407637 NPYP01303 97 aa10.18□□□□□ -0.78
HERC3-203ENST00000407637 IGLV2-11P01706 119 aa10.18□□□□□ -0.78
HERC3-203ENST00000407637 GP9P14770 177 aa10.18□□□□□ -0.78
HERC3-203ENST00000407637 SRSF1Q07955 248 aaKnown RBP eCLIP10.18□□□□□ -0.78
HERC3-203ENST00000407637 POU2AF1Q16633 256 aa10.18□□□□□ -0.78
HERC3-203ENST00000407637 RITA1Q96K30 269 aa10.18□□□□□ -0.78
HERC3-203ENST00000407637 CARD19Q96LW7 228 aa10.18□□□□□ -0.78
HERC3-203ENST00000407637 ZMAT4Q9H898 229 aa10.18□□□□□ -0.78
HERC3-203ENST00000407637 SAA1P0DJI8 122 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms