RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.5□□□□□ -1.05
CLIP4-204ENST00000404424 K7EIM0 57 aa8.5□□□□□ -1.05
CLIP4-204ENST00000404424 SIAH2O43255 324 aa8.5□□□□□ -1.05
CLIP4-204ENST00000404424 CNIH1O95406 144 aa8.5□□□□□ -1.05
CLIP4-204ENST00000404424 DLX1P56177 255 aa8.5□□□□□ -1.05
CLIP4-204ENST00000404424 RIGQ13278 110 aa8.5□□□□□ -1.05
CLIP4-204ENST00000404424 MUC15Q8N387 334 aa8.5□□□□□ -1.05
CLIP4-204ENST00000404424 ROS1P08922 2347 aa8.49□□□□□ -1.05
CLIP4-204ENST00000404424 Q6AWC8 147 aa8.49□□□□□ -1.05
CLIP4-204ENST00000404424 PET117Q6UWS5 81 aa8.49□□□□□ -1.05
CLIP4-204ENST00000404424 SPATA12Q7Z6I5 190 aa8.49□□□□□ -1.05
CLIP4-204ENST00000404424 RP1L1Q8IWN7 2480 aaPredicted RBP8.49□□□□□ -1.05
CLIP4-204ENST00000404424 VKORC1Q9BQB6 163 aa8.49□□□□□ -1.05
CLIP4-204ENST00000404424 TMEM191AQ9H0A3 160 aa8.49□□□□□ -1.05
CLIP4-204ENST00000404424 TRAV30A0A087WSZ9 112 aa8.49□□□□□ -1.05
CLIP4-204ENST00000404424 SH2D7A6NKC9 451 aaPredicted RBP8.49□□□□□ -1.05
CLIP4-204ENST00000404424 CD24P25063 80 aa8.49□□□□□ -1.05
CLIP4-204ENST00000404424 HINT1P49773 126 aaPredicted RBP8.49□□□□□ -1.05
CLIP4-204ENST00000404424 PSG3Q16557 428 aa8.49□□□□□ -1.05
CLIP4-204ENST00000404424 SIGLEC15Q6ZMC9 328 aa8.49□□□□□ -1.05
CLIP4-204ENST00000404424 ZNF491Q8N8L2 437 aa8.49□□□□□ -1.05
CLIP4-204ENST00000404424 MAP1LC3CQ9BXW4 147 aa8.49□□□□□ -1.05
CLIP4-204ENST00000404424 HSPB8Q9UJY1 196 aa8.49□□□□□ -1.05
CLIP4-204ENST00000404424 ZNF318Q5VUA4 2279 aa8.49□□□□□ -1.05
CLIP4-204ENST00000404424 LYNX1G3V0Z9 82 aa8.48□□□□□ -1.05
CLIP4-204ENST00000404424 M0QZ24 198 aa8.48□□□□□ -1.05
CLIP4-204ENST00000404424 OVOL3O00110 214 aa8.48□□□□□ -1.05
CLIP4-204ENST00000404424 NBR2O15453 112 aa8.48□□□□□ -1.05
CLIP4-204ENST00000404424 LYNX1P0DP58 116 aa8.48□□□□□ -1.05
CLIP4-204ENST00000404424 HTR1DP28221 377 aa8.48□□□□□ -1.05
CLIP4-204ENST00000404424 PRB3Q04118 309 aaPredicted RBP8.48□□□□□ -1.05
CLIP4-204ENST00000404424 PDE6HQ13956 83 aa8.48□□□□□ -1.05
CLIP4-204ENST00000404424 LY6G5BQ8NDX9 201 aa8.48□□□□□ -1.05
CLIP4-204ENST00000404424 RNF125Q96EQ8 232 aa8.48□□□□□ -1.05
CLIP4-204ENST00000404424 ZC2HC1AQ96GY0 325 aa8.48□□□□□ -1.05
CLIP4-204ENST00000404424 RAB1BQ9H0U4 201 aa8.48□□□□□ -1.05
CLIP4-204ENST00000404424 PSG8Q9UQ74 426 aa8.48□□□□□ -1.05
CLIP4-204ENST00000404424 WI2-2373I1.2A0A1W2PRP0 233 aa8.48□□□□□ -1.05
CLIP4-204ENST00000404424 TIMM23O14925 209 aa8.48□□□□□ -1.05
CLIP4-204ENST00000404424 MRPS12O15235 138 aaKnown RBP8.48□□□□□ -1.05
CLIP4-204ENST00000404424 HLA-DRB1P01911 266 aa8.48□□□□□ -1.05
CLIP4-204ENST00000404424 NPBQ8NG41 125 aa8.48□□□□□ -1.05
CLIP4-204ENST00000404424 DPM3Q9P2X0 92 aa8.48□□□□□ -1.05
CLIP4-204ENST00000404424 SMG1Q96Q15 3661 aaKnown RBP8.48□□□□□ -1.05
CLIP4-204ENST00000404424 SERTM2A0A1B0GWG4 89 aa8.47□□□□□ -1.05
CLIP4-204ENST00000404424 ZNF785A8K8V0 405 aa8.47□□□□□ -1.05
CLIP4-204ENST00000404424 HSBP1L1C9JCN9 74 aa8.47□□□□□ -1.05
CLIP4-204ENST00000404424 NDUFA3O95167 84 aa8.47□□□□□ -1.05
CLIP4-204ENST00000404424 IL4P05112 153 aa8.47□□□□□ -1.05
CLIP4-204ENST00000404424 TCF15Q12870 199 aa8.47□□□□□ -1.05
CLIP4-204ENST00000404424 ZNF738Q8NE65 137 aa8.47□□□□□ -1.05
CLIP4-204ENST00000404424 OR11H6Q8NGC7 330 aa8.47□□□□□ -1.05
CLIP4-204ENST00000404424 ZNF414Q96IQ9 312 aa8.47□□□□□ -1.05
CLIP4-204ENST00000404424 BSNQ9UPA5 3926 aa8.47□□□□□ -1.05
CLIP4-204ENST00000404424 PKDREJQ9NTG1 2253 aa8.47□□□□□ -1.05
CLIP4-204ENST00000404424 TOX4O94842 621 aa8.47□□□□□ -1.05
CLIP4-204ENST00000404424 CEACAM3P40198 252 aa8.47□□□□□ -1.05
CLIP4-204ENST00000404424 ZNF672Q499Z4 452 aaPredicted RBP8.47□□□□□ -1.05
CLIP4-204ENST00000404424 PRR31Q5SQ13 230 aa8.47□□□□□ -1.05
CLIP4-204ENST00000404424 C17orf77Q96MU5 243 aa8.47□□□□□ -1.05
CLIP4-204ENST00000404424 ZNF48Q96MX3 618 aaPredicted RBP8.47□□□□□ -1.05
CLIP4-204ENST00000404424 MS4A6AQ9H2W1 248 aa8.47□□□□□ -1.05
CLIP4-204ENST00000404424 ONECUT1Q9UBC0 465 aa8.47□□□□□ -1.05
CLIP4-204ENST00000404424 COX11Q9Y6N1 276 aa8.47□□□□□ -1.05
CLIP4-204ENST00000404424 ARMS2P0C7Q2 107 aa8.46□□□□□ -1.05
CLIP4-204ENST00000404424 LINC00173Q6ZV60 143 aa8.46□□□□□ -1.05
CLIP4-204ENST00000404424 NEU4Q8WWR8 484 aaPredicted RBP8.46□□□□□ -1.05
CLIP4-204ENST00000404424 BOD1L1Q8NFC6 3051 aa8.46□□□□□ -1.05
CLIP4-204ENST00000404424 TCF21O43680 179 aa8.46□□□□□ -1.06
CLIP4-204ENST00000404424 CT45A10P0DMU9 189 aa8.46□□□□□ -1.06
CLIP4-204ENST00000404424 FCGR2BP31994 310 aaPredicted RBP8.46□□□□□ -1.06
CLIP4-204ENST00000404424 SLC25A34Q6PIV7 304 aa8.46□□□□□ -1.06
CLIP4-204ENST00000404424 ZNF493Q6ZR52 646 aa8.46□□□□□ -1.06
CLIP4-204ENST00000404424 ARL6IP6Q8N6S5 226 aa8.46□□□□□ -1.06
CLIP4-204ENST00000404424 CFHR4Q92496 578 aa8.46□□□□□ -1.06
CLIP4-204ENST00000404424 TMUB1Q9BVT8 246 aa8.46□□□□□ -1.06
CLIP4-204ENST00000404424 AAMDCQ9H7C9 122 aa8.46□□□□□ -1.06
CLIP4-204ENST00000404424 AP5S1Q9NUS5 200 aa8.46□□□□□ -1.06
CLIP4-204ENST00000404424 NPIPB5A8MRT5 1133 aa8.45□□□□□ -1.06
CLIP4-204ENST00000404424 GNG7O60262 68 aa8.45□□□□□ -1.06
CLIP4-204ENST00000404424 PRR30Q53SZ7 412 aaPredicted RBP8.45□□□□□ -1.06
CLIP4-204ENST00000404424 LDLRAD2Q5SZI1 272 aa8.45□□□□□ -1.06
CLIP4-204ENST00000404424 M0R1W7 72 aa8.45□□□□□ -1.06
CLIP4-204ENST00000404424 CSN1S1P47710 185 aa8.45□□□□□ -1.06
CLIP4-204ENST00000404424 CRIP1P50238 77 aa8.45□□□□□ -1.06
CLIP4-204ENST00000404424 PTTG1IPP53801 180 aa8.45□□□□□ -1.06
CLIP4-204ENST00000404424 MFAP4P55083 255 aa8.45□□□□□ -1.06
CLIP4-204ENST00000404424 FBXL19-AS1Q494R0 122 aa8.45□□□□□ -1.06
CLIP4-204ENST00000404424 UNQ5815/PRO19632Q6UWF5 114 aa8.45□□□□□ -1.06
CLIP4-204ENST00000404424 LINC01560Q8TB33 94 aa8.45□□□□□ -1.06
CLIP4-204ENST00000404424 LAMA5O15230 3695 aa8.45□□□□□ -1.06
CLIP4-204ENST00000404424 CEP250Q9BV73 2442 aa8.45□□□□□ -1.06
CLIP4-204ENST00000404424 PCNX1Q96RV3 2341 aa8.44□□□□□ -1.06
CLIP4-204ENST00000404424 FBLL1A6NHQ2 334 aaKnown RBP8.44□□□□□ -1.06
CLIP4-204ENST00000404424 PSG9Q00887 426 aa8.44□□□□□ -1.06
CLIP4-204ENST00000404424 UBE2V1Q13404 147 aa8.44□□□□□ -1.06
CLIP4-204ENST00000404424 C5orf64Q2M2E5 130 aa8.44□□□□□ -1.06
CLIP4-204ENST00000404424 LINC01545Q5VT33 79 aa8.44□□□□□ -1.06
CLIP4-204ENST00000404424 Q71RC1 249 aaPredicted RBP8.44□□□□□ -1.06
CLIP4-204ENST00000404424 CBY1Q9Y3M2 126 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms