RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 TRAPPC8Q9Y2L5 1435 aa1.42□□□□□ -2.18
HMGB1P17-201ENST00000403495 KPNA4O00629 521 aaPredicted RBP1.42□□□□□ -2.18
HMGB1P17-201ENST00000403495 RER1O15258 196 aa1.42□□□□□ -2.18
HMGB1P17-201ENST00000403495 ARPC5O15511 151 aa1.42□□□□□ -2.18
HMGB1P17-201ENST00000403495 LYZL6O75951 148 aa1.42□□□□□ -2.18
HMGB1P17-201ENST00000403495 DHFRP00374 187 aa1.42□□□□□ -2.18
HMGB1P17-201ENST00000403495 NDUFA6P56556 154 aa1.42□□□□□ -2.18
HMGB1P17-201ENST00000403495 SARNPP82979 210 aaKnown RBP1.42□□□□□ -2.18
HMGB1P17-201ENST00000403495 KLRD1Q13241 179 aa1.42□□□□□ -2.18
HMGB1P17-201ENST00000403495 OR8B8Q15620 311 aa1.42□□□□□ -2.18
HMGB1P17-201ENST00000403495 Q1T7F1 81 aa1.42□□□□□ -2.18
HMGB1P17-201ENST00000403495 PHF5AQ7RTV0 110 aaKnown RBP1.42□□□□□ -2.18
HMGB1P17-201ENST00000403495 Q8IYB0 196 aa1.42□□□□□ -2.18
HMGB1P17-201ENST00000403495 LINC00311Q8N616 119 aa1.42□□□□□ -2.18
HMGB1P17-201ENST00000403495 MAFIPQ8WZ33 124 aa1.42□□□□□ -2.18
HMGB1P17-201ENST00000403495 RETNLBQ9BQ08 111 aa1.42□□□□□ -2.18
HMGB1P17-201ENST00000403495 SPANXCQ9NY87 97 aa1.42□□□□□ -2.18
HMGB1P17-201ENST00000403495 GSKIPQ9P0R6 139 aa1.42□□□□□ -2.18
HMGB1P17-201ENST00000403495 LY96Q9Y6Y9 160 aa1.42□□□□□ -2.18
HMGB1P17-201ENST00000403495 ARHGEF28Q8N1W1 1705 aaKnown RBP1.42□□□□□ -2.18
HMGB1P17-201ENST00000403495 MALRD1Q5VYJ5 2156 aa1.41□□□□□ -2.18
HMGB1P17-201ENST00000403495 DEGS1O15121 323 aa1.41□□□□□ -2.18
HMGB1P17-201ENST00000403495 MT-ND6P03923 174 aa1.41□□□□□ -2.18
HMGB1P17-201ENST00000403495 GTF2A1P52655 376 aaPredicted RBP1.41□□□□□ -2.18
HMGB1P17-201ENST00000403495 RPS28P62857 69 aaKnown RBP1.41□□□□□ -2.18
HMGB1P17-201ENST00000403495 SMCO1Q147U7 214 aa1.41□□□□□ -2.18
HMGB1P17-201ENST00000403495 NUMA1Q14980 2115 aa1.41□□□□□ -2.18
HMGB1P17-201ENST00000403495 CCDC153Q494R4 210 aa1.41□□□□□ -2.18
HMGB1P17-201ENST00000403495 FP248Q71RG6 208 aaPredicted RBP1.41□□□□□ -2.18
HMGB1P17-201ENST00000403495 RPS19BP1Q86WX3 136 aaKnown RBP1.41□□□□□ -2.18
HMGB1P17-201ENST00000403495 OR2T35Q8NGX2 323 aa1.41□□□□□ -2.18
HMGB1P17-201ENST00000403495 LZICQ8WZA0 190 aa1.41□□□□□ -2.18
HMGB1P17-201ENST00000403495 CHCHD1Q96BP2 118 aaKnown RBP1.41□□□□□ -2.18
HMGB1P17-201ENST00000403495 JPT1Q9UK76 154 aa1.41□□□□□ -2.18
HMGB1P17-201ENST00000403495 ARAP1Q96P48 1450 aa1.41□□□□□ -2.18
HMGB1P17-201ENST00000403495 ADGBQ8N7X0 1667 aa1.41□□□□□ -2.18
HMGB1P17-201ENST00000403495 SCN10AQ9Y5Y9 1956 aa1.41□□□□□ -2.18
HMGB1P17-201ENST00000403495 MDC1Q14676 2089 aaKnown RBP1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 CPAMD8Q8IZJ3 1885 aa1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 ZCCHC6Q5VYS8 1495 aaKnown RBP1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 TRGV2A0A075B6R0 118 aa1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 TRAV36DV7A0A075B6V5 113 aa1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 A0A087WX48 190 aa1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 TRAV14DV4A0A0A6YYC5 116 aa1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 IGHV1-58A0A0C4DH39 117 aa1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 A0A1B0GX51 115 aa1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 C2orf70A6NJV1 201 aa1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 C17orf112F2Z3M2 114 aa1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 F8W036 122 aa1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 OR1I1O60431 355 aa1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 BRS3P32247 399 aa1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 ROMO1P60602 79 aa1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 S100A12P80511 92 aa1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 VMA21Q3ZAQ7 101 aa1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 LINC00305Q7Z4B0 112 aa1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 OR8I2Q8N0Y5 310 aa1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 TMEM229BQ8NBD8 167 aa1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 TMEM254Q8TBM7 123 aa1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 SFT2D1Q8WV19 159 aa1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 POP5Q969H6 163 aaKnown RBP1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 Q96M85 177 aa1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 LXNQ9BS40 222 aa1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 RASL12Q9NYN1 266 aa1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 TAS2R7Q9NYW3 318 aa1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 OR5AC2Q9NZP5 309 aa1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 FN1P02751 2386 aaKnown RBP1.4□□□□□ -2.19
HMGB1P17-201ENST00000403495 PTPRBP23467 1997 aa1.39□□□□□ -2.19
HMGB1P17-201ENST00000403495 ZFHX2Q9C0A1 2572 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P17-201ENST00000403495 PTPRSQ13332 1948 aa1.39□□□□□ -2.19
HMGB1P17-201ENST00000403495 RTL9Q8NET4 1388 aa1.39□□□□□ -2.19
HMGB1P17-201ENST00000403495 BORCS7-ASMTA0A0B4J1R7 106 aa1.39□□□□□ -2.19
HMGB1P17-201ENST00000403495 TRAV12-1A0A0B4J245 112 aa1.39□□□□□ -2.19
HMGB1P17-201ENST00000403495 TRBV7-6A0A0J9YX20 115 aa1.39□□□□□ -2.19
HMGB1P17-201ENST00000403495 M0R233 179 aa1.39□□□□□ -2.19
HMGB1P17-201ENST00000403495 PRB1P04280 392 aa1.39□□□□□ -2.19
HMGB1P17-201ENST00000403495 RAB5CP51148 216 aa1.39□□□□□ -2.19
HMGB1P17-201ENST00000403495 PSG9Q00887 426 aa1.39□□□□□ -2.19
HMGB1P17-201ENST00000403495 PDE6HQ13956 83 aa1.39□□□□□ -2.19
HMGB1P17-201ENST00000403495 DEFB113Q30KQ7 82 aa1.39□□□□□ -2.19
HMGB1P17-201ENST00000403495 C4orf22Q6V702 233 aa1.39□□□□□ -2.19
HMGB1P17-201ENST00000403495 TEX29Q8N6K0 151 aa1.39□□□□□ -2.19
HMGB1P17-201ENST00000403495 OR5D14Q8NGL3 314 aa1.39□□□□□ -2.19
HMGB1P17-201ENST00000403495 MCEEQ96PE7 176 aa1.39□□□□□ -2.19
HMGB1P17-201ENST00000403495 TMEM138Q9NPI0 162 aa1.39□□□□□ -2.19
HMGB1P17-201ENST00000403495 ARHGEF11O15085 1522 aa1.39□□□□□ -2.19
HMGB1P17-201ENST00000403495 ZNF106Q9H2Y7 1883 aaKnown RBP1.39□□□□□ -2.19
HMGB1P17-201ENST00000403495 OVOS2A0A0G2JMS6 1433 aa1.39□□□□□ -2.19
HMGB1P17-201ENST00000403495 GREB1Q4ZG55 1949 aa1.38□□□□□ -2.19
HMGB1P17-201ENST00000403495 A2MP01023 1474 aa1.38□□□□□ -2.19
HMGB1P17-201ENST00000403495 TRPM1Q7Z4N2 1603 aa1.38□□□□□ -2.19
HMGB1P17-201ENST00000403495 TRAV13-1A0A0B4J241 112 aa1.38□□□□□ -2.19
HMGB1P17-201ENST00000403495 LOC107984640A0A0U1RRK4 108 aa1.38□□□□□ -2.19
HMGB1P17-201ENST00000403495 OR2T8A6NH00 312 aa1.38□□□□□ -2.19
HMGB1P17-201ENST00000403495 DBIP07108 87 aaKnown RBP1.38□□□□□ -2.19
HMGB1P17-201ENST00000403495 CMPK1P30085 196 aa1.38□□□□□ -2.19
HMGB1P17-201ENST00000403495 FAM216BQ8N7L0 139 aa1.38□□□□□ -2.19
HMGB1P17-201ENST00000403495 OR5H6Q8NGV6 325 aa1.38□□□□□ -2.19
HMGB1P17-201ENST00000403495 ZNF563Q8TA94 476 aa1.38□□□□□ -2.19
HMGB1P17-201ENST00000403495 BRK1Q8WUW1 75 aa1.38□□□□□ -2.19
HMGB1P17-201ENST00000403495 BORCS5Q969J3 196 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms