RNA–Protein interactions for RNA: ENST00000400564.5

SAMSN1-202, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-202ENST00000400564 RETNLBQ9BQ08 111 aa1.88□□□□□ -2.11
SAMSN1-202ENST00000400564 TCEAL2Q9H3H9 227 aaPredicted RBP1.88□□□□□ -2.11
SAMSN1-202ENST00000400564 C14orf132Q9NPU4 83 aa1.88□□□□□ -2.11
SAMSN1-202ENST00000400564 TMEM106BQ9NUM4 274 aa1.88□□□□□ -2.11
SAMSN1-202ENST00000400564 ZCCHC11Q5TAX3 1644 aaKnown RBP1.88□□□□□ -2.11
SAMSN1-202ENST00000400564 TRAV14DV4A0A0A6YYC5 116 aa1.87□□□□□ -2.11
SAMSN1-202ENST00000400564 MT-ND6P03923 174 aa1.87□□□□□ -2.11
SAMSN1-202ENST00000400564 GPX1P07203 203 aa1.87□□□□□ -2.11
SAMSN1-202ENST00000400564 KLRD1Q13241 179 aa1.87□□□□□ -2.11
SAMSN1-202ENST00000400564 LINC00311Q8N616 119 aa1.87□□□□□ -2.11
SAMSN1-202ENST00000400564 ZCCHC13Q8WW36 166 aaKnown RBP1.87□□□□□ -2.11
SAMSN1-202ENST00000400564 CHCHD1Q96BP2 118 aaKnown RBP1.87□□□□□ -2.11
SAMSN1-202ENST00000400564 LY96Q9Y6Y9 160 aa1.87□□□□□ -2.11
SAMSN1-202ENST00000400564 NUMA1Q14980 2115 aa1.87□□□□□ -2.11
SAMSN1-202ENST00000400564 NCAPD3P42695 1498 aa1.87□□□□□ -2.11
SAMSN1-202ENST00000400564 BCL9O00512 1426 aa1.87□□□□□ -2.11
SAMSN1-202ENST00000400564 ARHGEF10O15013 1369 aa1.87□□□□□ -2.11
SAMSN1-202ENST00000400564 KPNA4O00629 521 aaPredicted RBP1.86□□□□□ -2.11
SAMSN1-202ENST00000400564 OVOL1O14753 267 aa1.86□□□□□ -2.11
SAMSN1-202ENST00000400564 DEGS1O15121 323 aa1.86□□□□□ -2.11
SAMSN1-202ENST00000400564 DHFRP00374 187 aa1.86□□□□□ -2.11
SAMSN1-202ENST00000400564 SARNPP82979 210 aaKnown RBP1.86□□□□□ -2.11
SAMSN1-202ENST00000400564 SMCO1Q147U7 214 aa1.86□□□□□ -2.11
SAMSN1-202ENST00000400564 OR8B8Q15620 311 aa1.86□□□□□ -2.11
SAMSN1-202ENST00000400564 PATE2Q6UY27 113 aa1.86□□□□□ -2.11
SAMSN1-202ENST00000400564 FP248Q71RG6 208 aaPredicted RBP1.86□□□□□ -2.11
SAMSN1-202ENST00000400564 PHF5AQ7RTV0 110 aaKnown RBP1.86□□□□□ -2.11
SAMSN1-202ENST00000400564 COA5Q86WW8 74 aa1.86□□□□□ -2.11
SAMSN1-202ENST00000400564 RPS19BP1Q86WX3 136 aaKnown RBP1.86□□□□□ -2.11
SAMSN1-202ENST00000400564 TMEM229BQ8NBD8 167 aa1.86□□□□□ -2.11
SAMSN1-202ENST00000400564 LXNQ9BS40 222 aa1.86□□□□□ -2.11
SAMSN1-202ENST00000400564 GSKIPQ9P0R6 139 aa1.86□□□□□ -2.11
SAMSN1-202ENST00000400564 DISP1Q96F81 1524 aa1.86□□□□□ -2.11
SAMSN1-202ENST00000400564 BRS3P32247 399 aa1.85□□□□□ -2.11
SAMSN1-202ENST00000400564 CCDC153Q494R4 210 aa1.85□□□□□ -2.11
SAMSN1-202ENST00000400564 C4orf22Q6V702 233 aa1.85□□□□□ -2.11
SAMSN1-202ENST00000400564 LINC00305Q7Z4B0 112 aa1.85□□□□□ -2.11
SAMSN1-202ENST00000400564 TEX29Q8N6K0 151 aa1.85□□□□□ -2.11
SAMSN1-202ENST00000400564 Q96M85 177 aa1.85□□□□□ -2.11
SAMSN1-202ENST00000400564 OR5AC2Q9NZP5 309 aa1.85□□□□□ -2.11
SAMSN1-202ENST00000400564 JPT1Q9UK76 154 aa1.85□□□□□ -2.11
SAMSN1-202ENST00000400564 TAF1LQ8IZX4 1826 aa1.85□□□□□ -2.11
SAMSN1-202ENST00000400564 N4BP2Q86UW6 1770 aaPredicted RBP1.85□□□□□ -2.11
SAMSN1-202ENST00000400564 CCDC88CQ9P219 2028 aa1.85□□□□□ -2.11
SAMSN1-202ENST00000400564 ADGBQ8N7X0 1667 aa1.85□□□□□ -2.11
SAMSN1-202ENST00000400564 TRAV36DV7A0A075B6V5 113 aa1.85□□□□□ -2.11
SAMSN1-202ENST00000400564 A0A087WX48 190 aa1.85□□□□□ -2.11
SAMSN1-202ENST00000400564 IGHV1-58A0A0C4DH39 117 aa1.85□□□□□ -2.11
SAMSN1-202ENST00000400564 C2orf70A6NJV1 201 aa1.85□□□□□ -2.11
SAMSN1-202ENST00000400564 OR1I1O60431 355 aa1.85□□□□□ -2.11
SAMSN1-202ENST00000400564 CMPK1P30085 196 aa1.85□□□□□ -2.11
SAMSN1-202ENST00000400564 GTF2A1P52655 376 aaPredicted RBP1.85□□□□□ -2.11
SAMSN1-202ENST00000400564 RPS28P62857 69 aaKnown RBP1.85□□□□□ -2.11
SAMSN1-202ENST00000400564 DEFB113Q30KQ7 82 aa1.85□□□□□ -2.11
SAMSN1-202ENST00000400564 VMA21Q3ZAQ7 101 aa1.85□□□□□ -2.11
SAMSN1-202ENST00000400564 TMEM254Q8TBM7 123 aa1.85□□□□□ -2.11
SAMSN1-202ENST00000400564 SFT2D1Q8WV19 159 aa1.85□□□□□ -2.11
SAMSN1-202ENST00000400564 POP5Q969H6 163 aaKnown RBP1.85□□□□□ -2.11
SAMSN1-202ENST00000400564 SPANXCQ9NY87 97 aa1.85□□□□□ -2.11
SAMSN1-202ENST00000400564 TRAPPC8Q9Y2L5 1435 aa1.84□□□□□ -2.11
SAMSN1-202ENST00000400564 SBF1O95248 1867 aa1.84□□□□□ -2.11
SAMSN1-202ENST00000400564 NUP98P52948 1817 aa1.84□□□□□ -2.11
SAMSN1-202ENST00000400564 OR2T8A6NH00 312 aa1.84□□□□□ -2.12
SAMSN1-202ENST00000400564 C17orf112F2Z3M2 114 aa1.84□□□□□ -2.12
SAMSN1-202ENST00000400564 M0R233 179 aa1.84□□□□□ -2.12
SAMSN1-202ENST00000400564 RAB5CP51148 216 aa1.84□□□□□ -2.12
SAMSN1-202ENST00000400564 ROMO1P60602 79 aa1.84□□□□□ -2.12
SAMSN1-202ENST00000400564 CLECL1Q8IZS7 167 aa1.84□□□□□ -2.12
SAMSN1-202ENST00000400564 OR8I2Q8N0Y5 310 aa1.84□□□□□ -2.12
SAMSN1-202ENST00000400564 OR5D14Q8NGL3 314 aa1.84□□□□□ -2.12
SAMSN1-202ENST00000400564 OR5H6Q8NGV6 325 aa1.84□□□□□ -2.12
SAMSN1-202ENST00000400564 RASL12Q9NYN1 266 aa1.84□□□□□ -2.12
SAMSN1-202ENST00000400564 MYO5AQ9Y4I1 1855 aaKnown RBP1.83□□□□□ -2.12
SAMSN1-202ENST00000400564 PLXNA3P51805 1871 aa1.83□□□□□ -2.12
SAMSN1-202ENST00000400564 NUP210Q8TEM1 1887 aaPredicted RBP1.83□□□□□ -2.12
SAMSN1-202ENST00000400564 TRAV13-1A0A0B4J241 112 aa1.83□□□□□ -2.12
SAMSN1-202ENST00000400564 TRAV12-1A0A0B4J245 112 aa1.83□□□□□ -2.12
SAMSN1-202ENST00000400564 TRBV6-5A0A0K0K1A5 114 aa1.83□□□□□ -2.12
SAMSN1-202ENST00000400564 F8W036 122 aa1.83□□□□□ -2.12
SAMSN1-202ENST00000400564 S100A12P80511 92 aa1.83□□□□□ -2.12
SAMSN1-202ENST00000400564 DEFB103AP81534 67 aa1.83□□□□□ -2.12
SAMSN1-202ENST00000400564 Q6ZRN7 208 aaPredicted RBP1.83□□□□□ -2.12
SAMSN1-202ENST00000400564 FAM216BQ8N7L0 139 aa1.83□□□□□ -2.12
SAMSN1-202ENST00000400564 BRK1Q8WUW1 75 aa1.83□□□□□ -2.12
SAMSN1-202ENST00000400564 TMEM138Q9NPI0 162 aa1.83□□□□□ -2.12
SAMSN1-202ENST00000400564 TAS2R7Q9NYW3 318 aa1.83□□□□□ -2.12
SAMSN1-202ENST00000400564 CRCT1Q9UGL9 99 aa1.83□□□□□ -2.12
SAMSN1-202ENST00000400564 STRCQ7RTU9 1775 aa1.83□□□□□ -2.12
SAMSN1-202ENST00000400564 ZFHX2Q9C0A1 2572 aaPredicted RBP1.82□□□□□ -2.12
SAMSN1-202ENST00000400564 IGKV2D-26A0A0A0MRZ7 120 aa1.82□□□□□ -2.12
SAMSN1-202ENST00000400564 BORCS7-ASMTA0A0B4J1R7 106 aa1.82□□□□□ -2.12
SAMSN1-202ENST00000400564 LOC107984640A0A0U1RRK4 108 aa1.82□□□□□ -2.12
SAMSN1-202ENST00000400564 A0A1B0GX51 115 aa1.82□□□□□ -2.12
SAMSN1-202ENST00000400564 B4DSR2 109 aa1.82□□□□□ -2.12
SAMSN1-202ENST00000400564 C5orf58C9J3I9 102 aa1.82□□□□□ -2.12
SAMSN1-202ENST00000400564 H3BMG7 143 aa1.82□□□□□ -2.12
SAMSN1-202ENST00000400564 M0QZK8 103 aa1.82□□□□□ -2.12
SAMSN1-202ENST00000400564 LYRM1O43325 122 aa1.82□□□□□ -2.12
SAMSN1-202ENST00000400564 SDC4P31431 198 aa1.82□□□□□ -2.12
SAMSN1-202ENST00000400564 CKS1BP61024 79 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms