RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 F8WEM9 126 aa6.79□□□□□ -1.32
SPTLC3-201ENST00000399002 RNF114Q9Y508 228 aa6.79□□□□□ -1.32
SPTLC3-201ENST00000399002 TRAV3A0A0B4J244 114 aa6.79□□□□□ -1.32
SPTLC3-201ENST00000399002 J3QLI3 93 aa6.79□□□□□ -1.32
SPTLC3-201ENST00000399002 CDK2AP2O75956 126 aa6.79□□□□□ -1.32
SPTLC3-201ENST00000399002 UBE2E1P51965 193 aa6.79□□□□□ -1.32
SPTLC3-201ENST00000399002 ZNF876PQ49A33 203 aa6.79□□□□□ -1.32
SPTLC3-201ENST00000399002 Q6ZS92 163 aa6.79□□□□□ -1.32
SPTLC3-201ENST00000399002 LSM4Q9Y4Z0 139 aaKnown RBP6.79□□□□□ -1.32
SPTLC3-201ENST00000399002 H3BUA1 57 aa6.79□□□□□ -1.32
SPTLC3-201ENST00000399002 SAP30O75446 220 aa6.79□□□□□ -1.32
SPTLC3-201ENST00000399002 TAL2Q16559 108 aa6.79□□□□□ -1.32
SPTLC3-201ENST00000399002 C2orf82Q6UX34 121 aa6.79□□□□□ -1.32
SPTLC3-201ENST00000399002 CST9LQ9H4G1 147 aa6.79□□□□□ -1.32
SPTLC3-201ENST00000399002 SMIM27A0A1W2PRY6 76 aa6.79□□□□□ -1.32
SPTLC3-201ENST00000399002 SSC4DQ8WTU2 575 aa6.79□□□□□ -1.32
SPTLC3-201ENST00000399002 TMEM158Q8WZ71 300 aa6.79□□□□□ -1.32
SPTLC3-201ENST00000399002 LIME1Q9H400 295 aa6.79□□□□□ -1.32
SPTLC3-201ENST00000399002 TRBV20-1A0A075B6N2 111 aa6.78□□□□□ -1.32
SPTLC3-201ENST00000399002 HGFACQ04756 655 aa6.78□□□□□ -1.32
SPTLC3-201ENST00000399002 FHL1Q13642 323 aa6.78□□□□□ -1.32
SPTLC3-201ENST00000399002 NDUFA4L2Q9NRX3 87 aa6.78□□□□□ -1.32
SPTLC3-201ENST00000399002 TFF1P04155 84 aa6.78□□□□□ -1.32
SPTLC3-201ENST00000399002 TEX36Q5VZQ5 186 aa6.78□□□□□ -1.32
SPTLC3-201ENST00000399002 GREB1Q4ZG55 1949 aa6.78□□□□□ -1.32
SPTLC3-201ENST00000399002 VWC2LB2RUY7 222 aa6.78□□□□□ -1.32
SPTLC3-201ENST00000399002 JPT2Q9H910 190 aa6.78□□□□□ -1.32
SPTLC3-201ENST00000399002 TRAV12-3A0A0B4J271 114 aa6.78□□□□□ -1.32
SPTLC3-201ENST00000399002 SRRM4A7MD48 611 aaKnown RBP6.78□□□□□ -1.32
SPTLC3-201ENST00000399002 PFN1P07737 140 aaKnown RBP6.78□□□□□ -1.32
SPTLC3-201ENST00000399002 KIR3DS1Q14943 382 aa6.78□□□□□ -1.32
SPTLC3-201ENST00000399002 CRIM1Q9NZV1 1036 aa6.78□□□□□ -1.32
SPTLC3-201ENST00000399002 IGHV3OR16-8A0A075B7F1 116 aa6.77□□□□□ -1.32
SPTLC3-201ENST00000399002 I3L3M4 83 aa6.77□□□□□ -1.32
SPTLC3-201ENST00000399002 TNFRSF6BO95407 300 aa6.77□□□□□ -1.32
SPTLC3-201ENST00000399002 HTN3P15516 51 aa6.77□□□□□ -1.32
SPTLC3-201ENST00000399002 IGKV3D-20A0A0C4DH25 116 aa6.77□□□□□ -1.33
SPTLC3-201ENST00000399002 H3BRN7 92 aa6.77□□□□□ -1.33
SPTLC3-201ENST00000399002 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.77□□□□□ -1.33
SPTLC3-201ENST00000399002 K7EMI3 77 aa6.77□□□□□ -1.33
SPTLC3-201ENST00000399002 SIVA1O15304 175 aa6.77□□□□□ -1.33
SPTLC3-201ENST00000399002 PPIFP30405 207 aaKnown RBP6.77□□□□□ -1.33
SPTLC3-201ENST00000399002 THAP8Q8NA92 274 aa6.77□□□□□ -1.33
SPTLC3-201ENST00000399002 NCR2O95944 276 aa6.77□□□□□ -1.33
SPTLC3-201ENST00000399002 INAFM2P0DMQ5 153 aa6.77□□□□□ -1.33
SPTLC3-201ENST00000399002 TMEM249Q2WGJ8 235 aa6.77□□□□□ -1.33
SPTLC3-201ENST00000399002 GFI1BQ5VTD9 330 aa6.77□□□□□ -1.33
SPTLC3-201ENST00000399002 IGFL3Q6UXB1 125 aa6.77□□□□□ -1.33
SPTLC3-201ENST00000399002 CCDC88CQ9P219 2028 aa6.77□□□□□ -1.33
SPTLC3-201ENST00000399002 NSUN5P1Q3KNT7 163 aa6.77□□□□□ -1.33
SPTLC3-201ENST00000399002 H3BMM0 161 aa6.77□□□□□ -1.33
SPTLC3-201ENST00000399002 KLRD1Q13241 179 aa6.77□□□□□ -1.33
SPTLC3-201ENST00000399002 MST1LQ2TV78 715 aa6.77□□□□□ -1.33
SPTLC3-201ENST00000399002 UTF1Q5T230 341 aa6.77□□□□□ -1.33
SPTLC3-201ENST00000399002 PCM1Q15154 2024 aa6.77□□□□□ -1.33
SPTLC3-201ENST00000399002 TRGV1A0A0A0MS02 117 aa6.76□□□□□ -1.33
SPTLC3-201ENST00000399002 LINC01619G3V211 115 aa6.76□□□□□ -1.33
SPTLC3-201ENST00000399002 LURAP1LQ8IV03 231 aa6.76□□□□□ -1.33
SPTLC3-201ENST00000399002 MRPL53Q96EL3 112 aaKnown RBP6.76□□□□□ -1.33
SPTLC3-201ENST00000399002 PLXNA4Q9HCM2 1894 aa6.76□□□□□ -1.33
SPTLC3-201ENST00000399002 A0A087WX48 190 aa6.76□□□□□ -1.33
SPTLC3-201ENST00000399002 NDUFA4O00483 81 aa6.76□□□□□ -1.33
SPTLC3-201ENST00000399002 PIP4P2Q8N4L2 257 aa6.76□□□□□ -1.33
SPTLC3-201ENST00000399002 GATD1Q8NB37 220 aa6.76□□□□□ -1.33
SPTLC3-201ENST00000399002 RHPN1-AS1Q9BWJ2 59 aa6.76□□□□□ -1.33
SPTLC3-201ENST00000399002 COX11Q9Y6N1 276 aa6.76□□□□□ -1.33
SPTLC3-201ENST00000399002 RIPPLY3P57055 190 aa6.76□□□□□ -1.33
SPTLC3-201ENST00000399002 C10orf55Q5SWW7 151 aa6.76□□□□□ -1.33
SPTLC3-201ENST00000399002 FAM104BQ5XKR9 115 aa6.76□□□□□ -1.33
SPTLC3-201ENST00000399002 UBE2DNLQ8IWF7 75 aa6.76□□□□□ -1.33
SPTLC3-201ENST00000399002 FRMPD3Q5JV73 1810 aa6.76□□□□□ -1.33
SPTLC3-201ENST00000399002 IGHV1-24A0A0C4DH33 117 aa6.76□□□□□ -1.33
SPTLC3-201ENST00000399002 LGALS9BQ3B8N2 356 aa6.76□□□□□ -1.33
SPTLC3-201ENST00000399002 LGALS9CQ6DKI2 356 aa6.76□□□□□ -1.33
SPTLC3-201ENST00000399002 TRBV19A0A075B6N1 114 aa6.76□□□□□ -1.33
SPTLC3-201ENST00000399002 LYNX1G3V0Z9 82 aa6.76□□□□□ -1.33
SPTLC3-201ENST00000399002 PAX4O43316 350 aa6.76□□□□□ -1.33
SPTLC3-201ENST00000399002 LYNX1P0DP58 116 aa6.76□□□□□ -1.33
SPTLC3-201ENST00000399002 ADCYAP1P18509 176 aa6.76□□□□□ -1.33
SPTLC3-201ENST00000399002 PKIGQ9Y2B9 76 aa6.76□□□□□ -1.33
SPTLC3-201ENST00000399002 hDV102S1A0JD36 115 aa6.75□□□□□ -1.33
SPTLC3-201ENST00000399002 H3BUX3 64 aa6.75□□□□□ -1.33
SPTLC3-201ENST00000399002 LINC01545Q5VT33 79 aa6.75□□□□□ -1.33
SPTLC3-201ENST00000399002 PYGO2Q9BRQ0 406 aa6.75□□□□□ -1.33
SPTLC3-201ENST00000399002 PLXNA2O75051 1894 aa6.75□□□□□ -1.33
SPTLC3-201ENST00000399002 PMVKQ15126 192 aa6.75□□□□□ -1.33
SPTLC3-201ENST00000399002 A6NNC1 897 aa6.75□□□□□ -1.33
SPTLC3-201ENST00000399002 FOXG1P55316 489 aaPredicted RBP6.75□□□□□ -1.33
SPTLC3-201ENST00000399002 IGHV2-70DA0A0C4DH43 119 aa6.75□□□□□ -1.33
SPTLC3-201ENST00000399002 RBAKDNA6NC62 111 aa6.75□□□□□ -1.33
SPTLC3-201ENST00000399002 CD24P25063 80 aa6.75□□□□□ -1.33
SPTLC3-201ENST00000399002 TMEM256Q8N2U0 113 aa6.75□□□□□ -1.33
SPTLC3-201ENST00000399002 MCRIP2Q9BUT9 160 aaKnown RBP6.75□□□□□ -1.33
SPTLC3-201ENST00000399002 LAMTOR3Q9UHA4 124 aa6.75□□□□□ -1.33
SPTLC3-201ENST00000399002 HS3ST6Q96QI5 342 aa6.75□□□□□ -1.33
SPTLC3-201ENST00000399002 A0A1W2PPI3 338 aa6.74□□□□□ -1.33
SPTLC3-201ENST00000399002 F8W1H4 67 aa6.74□□□□□ -1.33
SPTLC3-201ENST00000399002 CD33P20138 364 aa6.74□□□□□ -1.33
SPTLC3-201ENST00000399002 C11orf52Q96A22 123 aa6.74□□□□□ -1.33
SPTLC3-201ENST00000399002 UBE2WQ96B02 151 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms