RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 TRBV5-4A0A0C4DH59 114 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 SS18Q15532 418 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 TIFABQ6ZNK6 161 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 C10orf105Q8TEF2 133 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 PRO0461Q9UI25 63 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 hDV102S1A0JD36 115 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 MEIS3P1A6NDR6 274 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 TMEM250H0YL14 139 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 IGLV3-25P01717 112 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 CBLN1P23435 193 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 DAPP51397 102 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 ZNF80P51504 273 aaPredicted RBP3.26□□□□□ -1.89
HERC4-204ENST00000395198 ABCA11PQ4W5N1 156 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 ATP1A1-AS1Q5TC04 95 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 Q6ZQT7 251 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 Q6ZS92 163 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 RNF182Q8N6D2 247 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 OR10P1Q8NGE3 313 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 OR9G1Q8NH87 305 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 F11RQ9Y624 299 aaKnown RBP3.26□□□□□ -1.89
HERC4-204ENST00000395198 TRAV8-3A0A0A6YYJ7 113 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 K7EQD1 137 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 CREBL2O60519 120 aaPredicted RBP3.25□□□□□ -1.89
HERC4-204ENST00000395198 SDC2P34741 201 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 OPRM1P35372 400 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 DPTQ07507 201 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 ETDBQ3ZM63 59 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 MARCH3Q86UD3 253 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 DEFB127Q9H1M4 99 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 PDCD11Q14690 1871 aaKnown RBP3.25□□□□□ -1.89
HERC4-204ENST00000395198 IGHV3-20A0A0C4DH32 117 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 FAM229AH3BQW9 127 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 IGHA1P01876 353 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 LGALS9BQ3B8N2 356 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 LGALS9CQ6DKI2 356 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 IGFL3Q6UXB1 125 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 MRGPREQ86SM8 312 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 SLC35B3Q9H1N7 401 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 LIME1Q9H400 295 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 LSM2Q9Y333 95 aaKnown RBP3.25□□□□□ -1.89
HERC4-204ENST00000395198 EXPH5Q8NEV8 1989 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 FER1L5A0AVI2 2057 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 ALPK2Q86TB3 2170 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 TRGV8A0A0C4DH27 118 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 CISD3P0C7P0 127 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 HOXB6P17509 224 aaKnown RBP3.25□□□□□ -1.89
HERC4-204ENST00000395198 GNB2P62879 340 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 REG3AQ06141 175 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 FAM219BQ5XKK7 198 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 LINC00305Q7Z4B0 112 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 SPATA12Q7Z6I5 190 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 RPS4Y2Q8TD47 263 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 GEMIN6Q8WXD5 167 aaKnown RBP3.25□□□□□ -1.89
HERC4-204ENST00000395198 CNRIP1Q96F85 164 aaPredicted RBP3.25□□□□□ -1.89
HERC4-204ENST00000395198 CALYQ9NYX4 217 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 CKLFQ9UBR5 152 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 TDRD6O60522 2096 aaKnown RBP3.25□□□□□ -1.89
HERC4-204ENST00000395198 BRCA2P51587 3418 aa3.25□□□□□ -1.89
HERC4-204ENST00000395198 SDK2Q58EX2 2172 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 SMIM26A0A096LP01 95 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 TRBV12-3P01733 135 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 TAS2R45P59539 299 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 LAIR2Q6ISS4 152 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 CLECL1Q8IZS7 167 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 ZNF71Q9NQZ8 489 aaPredicted RBP3.24□□□□□ -1.89
HERC4-204ENST00000395198 IGKV1-27A0A075B6S5 117 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 IGKV1-8A0A0C4DH67 115 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 ZNF73O43830 326 aaPredicted RBP3.24□□□□□ -1.89
HERC4-204ENST00000395198 ZNF253O75346 499 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 VDAC1P21796 283 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 GADD45AP24522 165 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 SNRPD3P62318 126 aaKnown RBP3.24□□□□□ -1.89
HERC4-204ENST00000395198 QRFPP83859 136 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 WDR38Q5JTN6 314 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 PCSK4Q6UW60 755 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 NFE4Q86UQ8 179 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 PGLYRP4Q96LB8 373 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 PCNX1Q96RV3 2341 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 TRGV11A0A075B6L2 103 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 A0A0J9YXV3 536 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 INS-IGF2F8WCM5 200 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 H3BUT2 72 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 TCL1BO95988 128 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 HMGN2P05204 90 aaKnown RBP3.24□□□□□ -1.89
HERC4-204ENST00000395198 LINC00205P59089 165 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 UBE2NLQ5JXB2 153 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 DPPA3Q6W0C5 159 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 VCANP13611 3396 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 APOMO95445 188 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 C1QAP02745 245 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 PYYP10082 97 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 FABP2P12104 132 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 RPS18P62269 152 aaKnown RBP3.24□□□□□ -1.89
HERC4-204ENST00000395198 ADIRFQ15847 76 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 Q56UQ5 140 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 MSRB3Q8IXL7 192 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 CRIPAKQ8N1N5 446 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 OR10G2Q8NGC3 310 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 PLA2G2EQ9NZK7 142 aa3.24□□□□□ -1.89
HERC4-204ENST00000395198 NOP16Q9Y3C1 178 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms