RNA–Protein interactions for RNA: ENST00000395146.8

AFF1-202, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene AFF1, Length 9,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-202ENST00000395146 SHANK2-AS3Q9BTD1 123 aa8.77□□□□□ -1.01
AFF1-202ENST00000395146 THSD7BQ9C0I4 1608 aa8.77□□□□□ -1.01
AFF1-202ENST00000395146 KIR3DS1Q14943 382 aa8.77□□□□□ -1.01
AFF1-202ENST00000395146 LINC00477Q96M19 166 aa8.77□□□□□ -1.01
AFF1-202ENST00000395146 SDK2Q58EX2 2172 aa8.77□□□□□ -1.01
AFF1-202ENST00000395146 TMEM75Q8N9X5 138 aa8.76□□□□□ -1.01
AFF1-202ENST00000395146 LMO1P25800 156 aa8.76□□□□□ -1.01
AFF1-202ENST00000395146 IGHV2-70P01814 119 aa8.76□□□□□ -1.01
AFF1-202ENST00000395146 ESDP10768 282 aa8.76□□□□□ -1.01
AFF1-202ENST00000395146 TP53BP1Q12888 1972 aaPredicted RBP8.76□□□□□ -1.01
AFF1-202ENST00000395146 IGHV2-5P01817 119 aa8.76□□□□□ -1.01
AFF1-202ENST00000395146 STHQ8IWL8 128 aa8.76□□□□□ -1.01
AFF1-202ENST00000395146 NCOR1P1Q9H4R4 102 aa8.76□□□□□ -1.01
AFF1-202ENST00000395146 TMEM14BQ9NUH8 114 aa8.76□□□□□ -1.01
AFF1-202ENST00000395146 DLX4Q92988 240 aaPredicted RBP8.76□□□□□ -1.01
AFF1-202ENST00000395146 LIME1Q9H400 295 aa8.76□□□□□ -1.01
AFF1-202ENST00000395146 CACNA1DQ01668 2161 aa8.76□□□□□ -1.01
AFF1-202ENST00000395146 COX11Q9Y6N1 276 aa8.76□□□□□ -1.01
AFF1-202ENST00000395146 RSPO3Q9BXY4 272 aaPredicted RBP8.75□□□□□ -1.01
AFF1-202ENST00000395146 SMAD7O15105 426 aaKnown RBP8.75□□□□□ -1.01
AFF1-202ENST00000395146 C18orf32Q8TCD1 76 aa8.75□□□□□ -1.01
AFF1-202ENST00000395146 MYLKQ15746 1914 aa8.75□□□□□ -1.01
AFF1-202ENST00000395146 PAX9P55771 341 aa8.75□□□□□ -1.01
AFF1-202ENST00000395146 VCYO14598 125 aa8.75□□□□□ -1.01
AFF1-202ENST00000395146 TRAV12-3A0A0B4J271 114 aa8.75□□□□□ -1.01
AFF1-202ENST00000395146 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.75□□□□□ -1.01
AFF1-202ENST00000395146 ZDBF2Q9HCK1 2354 aa8.75□□□□□ -1.01
AFF1-202ENST00000395146 SLC25A20O43772 301 aa8.75□□□□□ -1.01
AFF1-202ENST00000395146 IGKV1-16P04430 117 aa8.74□□□□□ -1.01
AFF1-202ENST00000395146 MALP21145 153 aa8.74□□□□□ -1.01
AFF1-202ENST00000395146 ZFAND6Q6FIF0 208 aa8.74□□□□□ -1.01
AFF1-202ENST00000395146 TMEM158Q8WZ71 300 aa8.74□□□□□ -1.01
AFF1-202ENST00000395146 CHAC1Q9BUX1 264 aa8.74□□□□□ -1.01
AFF1-202ENST00000395146 SNRNP200O75643 2136 aaKnown RBP8.74□□□□□ -1.01
AFF1-202ENST00000395146 MPDZO75970 2070 aa8.74□□□□□ -1.01
AFF1-202ENST00000395146 TRAV8-1A0A0A6YYK1 113 aa8.74□□□□□ -1.01
AFF1-202ENST00000395146 EFNA4P52798 201 aa8.74□□□□□ -1.01
AFF1-202ENST00000395146 YPEL3P61236 119 aaPredicted RBP8.74□□□□□ -1.01
AFF1-202ENST00000395146 PRR31Q5SQ13 230 aa8.74□□□□□ -1.01
AFF1-202ENST00000395146 Q8TAT8 98 aa8.74□□□□□ -1.01
AFF1-202ENST00000395146 FAM223BA6NKX1 122 aa8.74□□□□□ -1.01
AFF1-202ENST00000395146 FAM223AQ8IWN6 122 aa8.74□□□□□ -1.01
AFF1-202ENST00000395146 PLXNA4Q9HCM2 1894 aa8.74□□□□□ -1.01
AFF1-202ENST00000395146 CD33P20138 364 aa8.74□□□□□ -1.01
AFF1-202ENST00000395146 FAM231DQ6ZW35 169 aa8.74□□□□□ -1.01
AFF1-202ENST00000395146 ZNF726P1Q15940 193 aa8.74□□□□□ -1.01
AFF1-202ENST00000395146 HS3ST6Q96QI5 342 aa8.74□□□□□ -1.01
AFF1-202ENST00000395146 NAA38Q9BRA0 125 aaKnown RBP8.74□□□□□ -1.01
AFF1-202ENST00000395146 TMEM8BA6NDV4 472 aa8.74□□□□□ -1.01
AFF1-202ENST00000395146 TRAV40A0A0B4J280 105 aa8.73□□□□□ -1.01
AFF1-202ENST00000395146 IGKV3D-20A0A0C4DH25 116 aa8.73□□□□□ -1.01
AFF1-202ENST00000395146 GAGE2BQ13066 116 aa8.73□□□□□ -1.01
AFF1-202ENST00000395146 GAGE2EQ4V326 116 aa8.73□□□□□ -1.01
AFF1-202ENST00000395146 ZC2HC1BQ5TFG8 222 aa8.73□□□□□ -1.01
AFF1-202ENST00000395146 GAGE2DQ9UEU5 116 aa8.73□□□□□ -1.01
AFF1-202ENST00000395146 GAGE12BA1L429 117 aa8.73□□□□□ -1.01
AFF1-202ENST00000395146 LINC00205P59089 165 aa8.73□□□□□ -1.01
AFF1-202ENST00000395146 ESPL1Q14674 2120 aa8.73□□□□□ -1.01
AFF1-202ENST00000395146 GATA4P43694 442 aa8.73□□□□□ -1.01
AFF1-202ENST00000395146 TMEM86BQ8N661 226 aa8.73□□□□□ -1.01
AFF1-202ENST00000395146 GGTLC3B5MD39 225 aa8.73□□□□□ -1.01
AFF1-202ENST00000395146 CKS1BP61024 79 aa8.73□□□□□ -1.01
AFF1-202ENST00000395146 SRSF6Q13247 344 aaKnown RBP8.73□□□□□ -1.01
AFF1-202ENST00000395146 TEX43Q6ZNM6 134 aa8.73□□□□□ -1.01
AFF1-202ENST00000395146 AMN1Q8IY45 258 aa8.73□□□□□ -1.01
AFF1-202ENST00000395146 USMG5Q96IX5 58 aa8.73□□□□□ -1.01
AFF1-202ENST00000395146 PGPEP1Q9NXJ5 209 aa8.73□□□□□ -1.01
AFF1-202ENST00000395146 TRIOBPQ9H2D6 2365 aa8.73□□□□□ -1.01
AFF1-202ENST00000395146 SRRM4A7MD48 611 aaKnown RBP8.73□□□□□ -1.01
AFF1-202ENST00000395146 ZNF562Q6V9R5 426 aa8.73□□□□□ -1.01
AFF1-202ENST00000395146 NDUFA4L2Q9NRX3 87 aa8.73□□□□□ -1.01
AFF1-202ENST00000395146 Q8TCH9 128 aa8.72□□□□□ -1.01
AFF1-202ENST00000395146 A0A1W2PPI3 338 aa8.72□□□□□ -1.01
AFF1-202ENST00000395146 MMP23AO75900 390 aa8.72□□□□□ -1.01
AFF1-202ENST00000395146 FNDC1Q4ZHG4 1894 aaPredicted RBP8.72□□□□□ -1.01
AFF1-202ENST00000395146 FXYD7P58549 80 aa8.72□□□□□ -1.01
AFF1-202ENST00000395146 Q5PR19 223 aa8.72□□□□□ -1.01
AFF1-202ENST00000395146 SNHG12Q9BXW3 62 aa8.72□□□□□ -1.01
AFF1-202ENST00000395146 DSCR9P59020 149 aa8.72□□□□□ -1.01
AFF1-202ENST00000395146 PRSS46E5RG02 174 aa8.72□□□□□ -1.01
AFF1-202ENST00000395146 TCF20Q9UGU0 1960 aaKnown RBP8.72□□□□□ -1.01
AFF1-202ENST00000395146 IGHV3-64A0A075B6Q5 118 aa8.72□□□□□ -1.01
AFF1-202ENST00000395146 CMC4P56277 68 aaPredicted RBP8.72□□□□□ -1.01
AFF1-202ENST00000395146 V9GYV3 84 aa8.72□□□□□ -1.01
AFF1-202ENST00000395146 SPACA3Q8IXA5 215 aa8.72□□□□□ -1.01
AFF1-202ENST00000395146 CSTL1Q9H114 145 aa8.72□□□□□ -1.01
AFF1-202ENST00000395146 SMIM27A0A1W2PRY6 76 aa8.71□□□□□ -1.01
AFF1-202ENST00000395146 ADARB2-AS1A8MUL3 147 aa8.71□□□□□ -1.01
AFF1-202ENST00000395146 ARMS2P0C7Q2 107 aa8.71□□□□□ -1.01
AFF1-202ENST00000395146 KLRD1Q13241 179 aa8.71□□□□□ -1.01
AFF1-202ENST00000395146 LINC00479Q96M42 142 aa8.71□□□□□ -1.01
AFF1-202ENST00000395146 TNFRSF6BO95407 300 aa8.71□□□□□ -1.01
AFF1-202ENST00000395146 IGKV1-39P01597 117 aa8.71□□□□□ -1.01
AFF1-202ENST00000395146 IGKV1D-39P04432 117 aa8.71□□□□□ -1.01
AFF1-202ENST00000395146 LYPD6BQ8NI32 183 aa8.71□□□□□ -1.01
AFF1-202ENST00000395146 OVOL2Q9BRP0 275 aa8.71□□□□□ -1.01
AFF1-202ENST00000395146 RTTNQ86VV8 2226 aa8.71□□□□□ -1.01
AFF1-202ENST00000395146 MDC1Q14676 2089 aaKnown RBP8.71□□□□□ -1.02
AFF1-202ENST00000395146 TRGV4A0A0C4DH28 118 aa8.71□□□□□ -1.02
AFF1-202ENST00000395146 NDUFB8O95169 186 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms