RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 DCHS1Q96JQ0 3298 aa10.03□□□□□ -0.8
SLC28A1-203ENST00000394573 LINC00271P0C7V0 271 aa10.03□□□□□ -0.8
SLC28A1-203ENST00000394573 FOXF2Q12947 444 aa10.03□□□□□ -0.8
SLC28A1-203ENST00000394573 RND1Q92730 232 aa10.03□□□□□ -0.8
SLC28A1-203ENST00000394573 RPEQ96AT9 228 aa10.03□□□□□ -0.8
SLC28A1-203ENST00000394573 PRSS22Q9GZN4 317 aa10.03□□□□□ -0.8
SLC28A1-203ENST00000394573 ENY2Q9NPA8 101 aa10.03□□□□□ -0.8
SLC28A1-203ENST00000394573 HOXA3O43365 443 aaPredicted RBP10.03□□□□□ -0.8
SLC28A1-203ENST00000394573 DEFB103AP81534 67 aa10.03□□□□□ -0.8
SLC28A1-203ENST00000394573 SRSF1Q07955 248 aaKnown RBP eCLIP10.03□□□□□ -0.8
SLC28A1-203ENST00000394573 OBP2BQ9NPH6 170 aa10.03□□□□□ -0.8
SLC28A1-203ENST00000394573 OBP2AQ9NY56 170 aa10.03□□□□□ -0.8
SLC28A1-203ENST00000394573 KLK5Q9Y337 293 aaPredicted RBP10.03□□□□□ -0.8
SLC28A1-203ENST00000394573 KLF17Q5JT82 389 aaPredicted RBP10.02□□□□□ -0.81
SLC28A1-203ENST00000394573 AMN1Q8IY45 258 aa10.02□□□□□ -0.81
SLC28A1-203ENST00000394573 C1orf162Q8NEQ5 155 aaPredicted RBP10.02□□□□□ -0.81
SLC28A1-203ENST00000394573 SRSF12Q8WXF0 261 aaKnown RBP10.02□□□□□ -0.81
SLC28A1-203ENST00000394573 URB1O60287 2271 aaKnown RBP10.02□□□□□ -0.81
SLC28A1-203ENST00000394573 A0A1B0GUT8 65 aa10.02□□□□□ -0.81
SLC28A1-203ENST00000394573 WISP2O76076 250 aa10.02□□□□□ -0.81
SLC28A1-203ENST00000394573 DUTP33316 252 aaKnown RBP10.02□□□□□ -0.81
SLC28A1-203ENST00000394573 FOXB1Q99853 325 aa10.02□□□□□ -0.81
SLC28A1-203ENST00000394573 FOXC2Q99958 501 aa10.02□□□□□ -0.81
SLC28A1-203ENST00000394573 DCTN5Q9BTE1 182 aa10.02□□□□□ -0.81
SLC28A1-203ENST00000394573 C21orf62Q9NYP8 219 aa10.02□□□□□ -0.81
SLC28A1-203ENST00000394573 EPDR1Q9UM22 224 aa10.02□□□□□ -0.81
SLC28A1-203ENST00000394573 MUC22E2RYF6 1773 aaPredicted RBP10.01□□□□□ -0.81
SLC28A1-203ENST00000394573 HAX1O00165 279 aa10.01□□□□□ -0.81
SLC28A1-203ENST00000394573 VEGFBP49765 207 aa10.01□□□□□ -0.81
SLC28A1-203ENST00000394573 RPL39P5Q59GN2 51 aa10.01□□□□□ -0.81
SLC28A1-203ENST00000394573 NPIPB3Q92617 1050 aa10.01□□□□□ -0.81
SLC28A1-203ENST00000394573 TRAV40A0A0B4J280 105 aa10.01□□□□□ -0.81
SLC28A1-203ENST00000394573 C19orf71A6NCJ1 209 aa10.01□□□□□ -0.81
SLC28A1-203ENST00000394573 A8MWV9 139 aa10.01□□□□□ -0.81
SLC28A1-203ENST00000394573 PSPNO60542 156 aa10.01□□□□□ -0.81
SLC28A1-203ENST00000394573 FAM19A5Q7Z5A7 132 aaPredicted RBP10.01□□□□□ -0.81
SLC28A1-203ENST00000394573 EYSQ5T1H1 3165 aa10.01□□□□□ -0.81
SLC28A1-203ENST00000394573 TMEM213A2RRL7 107 aa10□□□□□ -0.81
SLC28A1-203ENST00000394573 SRRM4A7MD48 611 aaKnown RBP10□□□□□ -0.81
SLC28A1-203ENST00000394573 OOSP1A8MZH6 123 aa10□□□□□ -0.81
SLC28A1-203ENST00000394573 PROP1O75360 226 aa10□□□□□ -0.81
SLC28A1-203ENST00000394573 TCL1BO95988 128 aa10□□□□□ -0.81
SLC28A1-203ENST00000394573 IGKCP01834 107 aa10□□□□□ -0.81
SLC28A1-203ENST00000394573 TNFRSF1AP19438 455 aa10□□□□□ -0.81
SLC28A1-203ENST00000394573 ERVK-16P61578 105 aa10□□□□□ -0.81
SLC28A1-203ENST00000394573 LINC01587Q99440 93 aa10□□□□□ -0.81
SLC28A1-203ENST00000394573 SRXN1Q9BYN0 137 aa10□□□□□ -0.81
SLC28A1-203ENST00000394573 PROCRQ9UNN8 238 aa10□□□□□ -0.81
SLC28A1-203ENST00000394573 TMEM262E9PQX1 116 aa10□□□□□ -0.81
SLC28A1-203ENST00000394573 THBDP07204 575 aa10□□□□□ -0.81
SLC28A1-203ENST00000394573 MLST8Q9BVC4 326 aa10□□□□□ -0.81
SLC28A1-203ENST00000394573 EDA2RQ9HAV5 297 aa10□□□□□ -0.81
SLC28A1-203ENST00000394573 CALYQ9NYX4 217 aa10□□□□□ -0.81
SLC28A1-203ENST00000394573 FER1L5A0AVI2 2057 aa9.99□□□□□ -0.81
SLC28A1-203ENST00000394573 COX7A2P2O60397 106 aa9.99□□□□□ -0.81
SLC28A1-203ENST00000394573 HLA-DRB4P13762 266 aa9.99□□□□□ -0.81
SLC28A1-203ENST00000394573 SSR4P51571 173 aa9.99□□□□□ -0.81
SLC28A1-203ENST00000394573 HLA-DRB4X5D2U9 266 aa9.99□□□□□ -0.81
SLC28A1-203ENST00000394573 SLC25A53Q5H9E4 307 aa9.99□□□□□ -0.81
SLC28A1-203ENST00000394573 C15orf53Q8NAA6 179 aa9.99□□□□□ -0.81
SLC28A1-203ENST00000394573 COQ2Q96H96 371 aa9.99□□□□□ -0.81
SLC28A1-203ENST00000394573 PRNTQ86SH4 94 aa9.98□□□□□ -0.81
SLC28A1-203ENST00000394573 SLC22A18ASQ8N1D0 253 aa9.98□□□□□ -0.81
SLC28A1-203ENST00000394573 NPYP01303 97 aa9.98□□□□□ -0.81
SLC28A1-203ENST00000394573 SP1P08047 785 aa9.98□□□□□ -0.81
SLC28A1-203ENST00000394573 PDPNQ86YL7 162 aa9.98□□□□□ -0.81
SLC28A1-203ENST00000394573 TMEM158Q8WZ71 300 aa9.98□□□□□ -0.81
SLC28A1-203ENST00000394573 FXYD5Q96DB9 178 aa9.98□□□□□ -0.81
SLC28A1-203ENST00000394573 OVOL3O00110 214 aa9.97□□□□□ -0.81
SLC28A1-203ENST00000394573 PIP4P1Q86T03 277 aa9.97□□□□□ -0.81
SLC28A1-203ENST00000394573 CXorf67Q86X51 503 aaPredicted RBP9.97□□□□□ -0.81
SLC28A1-203ENST00000394573 NAV3Q8IVL0 2385 aa9.97□□□□□ -0.81
SLC28A1-203ENST00000394573 PTPRBP23467 1997 aa9.97□□□□□ -0.81
SLC28A1-203ENST00000394573 TRBV7-3A0A075B6L6 115 aa9.97□□□□□ -0.81
SLC28A1-203ENST00000394573 NDUFA3O95167 84 aa9.97□□□□□ -0.81
SLC28A1-203ENST00000394573 RIGQ13278 110 aa9.97□□□□□ -0.81
SLC28A1-203ENST00000394573 TMEM155Q4W5P6 130 aa9.97□□□□□ -0.81
SLC28A1-203ENST00000394573 PRRC2CQ9Y520 2896 aaKnown RBP9.97□□□□□ -0.81
SLC28A1-203ENST00000394573 LEPP41159 167 aa9.97□□□□□ -0.81
SLC28A1-203ENST00000394573 CRIP2P52943 208 aaPredicted RBP9.97□□□□□ -0.81
SLC28A1-203ENST00000394573 ZNF474Q6S9Z5 364 aaPredicted RBP9.97□□□□□ -0.81
SLC28A1-203ENST00000394573 AAED1Q7RTV5 226 aa9.97□□□□□ -0.81
SLC28A1-203ENST00000394573 LINC00596Q86U02 117 aa9.97□□□□□ -0.81
SLC28A1-203ENST00000394573 OR1L4Q8NGR5 311 aa9.97□□□□□ -0.81
SLC28A1-203ENST00000394573 DNAJC30Q96LL9 226 aa9.97□□□□□ -0.81
SLC28A1-203ENST00000394573 MGAQ8IWI9 3026 aa9.96□□□□□ -0.81
SLC28A1-203ENST00000394573 TMEM78Q5T7P6 136 aa9.96□□□□□ -0.81
SLC28A1-203ENST00000394573 C10orf113Q5VZT2 155 aa9.96□□□□□ -0.81
SLC28A1-203ENST00000394573 PATE2Q6UY27 113 aa9.96□□□□□ -0.81
SLC28A1-203ENST00000394573 MRPL35Q9NZE8 188 aaKnown RBP9.96□□□□□ -0.81
SLC28A1-203ENST00000394573 ZNF492Q9P255 531 aa9.96□□□□□ -0.81
SLC28A1-203ENST00000394573 ZGRF1Q86YA3 2104 aa9.96□□□□□ -0.81
SLC28A1-203ENST00000394573 WNT9BO14905 357 aa9.96□□□□□ -0.82
SLC28A1-203ENST00000394573 GAS8-AS1O95177 125 aa9.96□□□□□ -0.82
SLC28A1-203ENST00000394573 COL9A1P20849 921 aa9.96□□□□□ -0.82
SLC28A1-203ENST00000394573 CXCL12P48061 93 aa9.96□□□□□ -0.82
SLC28A1-203ENST00000394573 CT83Q5H943 113 aa9.96□□□□□ -0.82
SLC28A1-203ENST00000394573 YAF2Q8IY57 180 aa9.96□□□□□ -0.82
SLC28A1-203ENST00000394573 GFRA4Q9GZZ7 299 aa9.96□□□□□ -0.82
SLC28A1-203ENST00000394573 TMEM126AQ9H061 195 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms