RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 Q6ZS46 218 aa8.9□□□□□ -0.99
SMARCAL1-203ENST00000392128 TEX29Q8N6K0 151 aa8.9□□□□□ -0.99
SMARCAL1-203ENST00000392128 ZNF414Q96IQ9 312 aa8.9□□□□□ -0.99
SMARCAL1-203ENST00000392128 NIT2Q9NQR4 276 aa8.9□□□□□ -0.99
SMARCAL1-203ENST00000392128 VPREB3Q9UKI3 123 aa8.9□□□□□ -0.99
SMARCAL1-203ENST00000392128 LY96Q9Y6Y9 160 aa8.9□□□□□ -0.99
SMARCAL1-203ENST00000392128 PDZD2O15018 2839 aa8.89□□□□□ -0.99
SMARCAL1-203ENST00000392128 TRGV3P03979 118 aa8.89□□□□□ -0.99
SMARCAL1-203ENST00000392128 HIST1H1EP10412 219 aaKnown RBP8.89□□□□□ -0.99
SMARCAL1-203ENST00000392128 DEFA6Q01524 100 aa8.89□□□□□ -0.99
SMARCAL1-203ENST00000392128 BPIFA4PQ86YQ2 179 aa8.89□□□□□ -0.99
SMARCAL1-203ENST00000392128 HIST1H2BAQ96A08 127 aa8.89□□□□□ -0.99
SMARCAL1-203ENST00000392128 NOL4LQ96MY1 436 aaPredicted RBP8.89□□□□□ -0.99
SMARCAL1-203ENST00000392128 MLXQ9UH92 298 aa8.89□□□□□ -0.99
SMARCAL1-203ENST00000392128 RNF24Q9Y225 148 aa8.89□□□□□ -0.99
SMARCAL1-203ENST00000392128 HELTA6NFD8 242 aa8.89□□□□□ -0.99
SMARCAL1-203ENST00000392128 CLDN34H7C241 214 aa8.89□□□□□ -0.99
SMARCAL1-203ENST00000392128 TGOLN2O43493 480 aa8.89□□□□□ -0.99
SMARCAL1-203ENST00000392128 CFHR3Q02985 330 aa8.89□□□□□ -0.99
SMARCAL1-203ENST00000392128 BLNKQ8WV28 456 aa8.89□□□□□ -0.99
SMARCAL1-203ENST00000392128 TMEM190Q8WZ59 177 aa8.89□□□□□ -0.99
SMARCAL1-203ENST00000392128 ANAPC16Q96DE5 110 aa8.89□□□□□ -0.99
SMARCAL1-203ENST00000392128 MRPS12O15235 138 aaKnown RBP8.88□□□□□ -0.99
SMARCAL1-203ENST00000392128 IGLV1-40P01703 118 aa8.88□□□□□ -0.99
SMARCAL1-203ENST00000392128 CD99P14209 185 aa8.88□□□□□ -0.99
SMARCAL1-203ENST00000392128 S100A7P31151 101 aa8.88□□□□□ -0.99
SMARCAL1-203ENST00000392128 RANP62826 216 aaKnown RBP8.88□□□□□ -0.99
SMARCAL1-203ENST00000392128 CLEC19AQ6UXS0 136 aa8.88□□□□□ -0.99
SMARCAL1-203ENST00000392128 FAM24BQ8N5W8 94 aa8.88□□□□□ -0.99
SMARCAL1-203ENST00000392128 USMG5Q96IX5 58 aa8.88□□□□□ -0.99
SMARCAL1-203ENST00000392128 ZNF586Q9NXT0 402 aa8.88□□□□□ -0.99
SMARCAL1-203ENST00000392128 ITPR3Q14573 2671 aa8.88□□□□□ -0.99
SMARCAL1-203ENST00000392128 BMPR1BO00238 502 aa8.88□□□□□ -0.99
SMARCAL1-203ENST00000392128 IGLC2P0DOY2 106 aa8.88□□□□□ -0.99
SMARCAL1-203ENST00000392128 TPPP2P59282 170 aa8.88□□□□□ -0.99
SMARCAL1-203ENST00000392128 ZFAND3Q9H8U3 227 aa8.88□□□□□ -0.99
SMARCAL1-203ENST00000392128 RABAC1Q9UI14 185 aa8.88□□□□□ -0.99
SMARCAL1-203ENST00000392128 PGPEP1LA6NFU8 196 aa8.87□□□□□ -0.99
SMARCAL1-203ENST00000392128 PEX7O00628 323 aa8.87□□□□□ -0.99
SMARCAL1-203ENST00000392128 SMAD7O15105 426 aaKnown RBP8.87□□□□□ -0.99
SMARCAL1-203ENST00000392128 SNRPCP09234 159 aaKnown RBP8.87□□□□□ -0.99
SMARCAL1-203ENST00000392128 FOLR2P14207 255 aa8.87□□□□□ -0.99
SMARCAL1-203ENST00000392128 ELOBQ15370 118 aa8.87□□□□□ -0.99
SMARCAL1-203ENST00000392128 TOMM20LQ6UXN7 152 aa8.87□□□□□ -0.99
SMARCAL1-203ENST00000392128 OR4F17Q8NGA8 305 aa8.87□□□□□ -0.99
SMARCAL1-203ENST00000392128 OCC1Q8TAD7 63 aa8.87□□□□□ -0.99
SMARCAL1-203ENST00000392128 ZNF469Q96JG9 3925 aaPredicted RBP8.87□□□□□ -0.99
SMARCAL1-203ENST00000392128 PGPA6NDG6 321 aa8.86□□□□□ -0.99
SMARCAL1-203ENST00000392128 HSBP1L1C9JCN9 74 aa8.86□□□□□ -0.99
SMARCAL1-203ENST00000392128 GNG4P50150 75 aa8.86□□□□□ -0.99
SMARCAL1-203ENST00000392128 CENPWQ5EE01 88 aa8.86□□□□□ -0.99
SMARCAL1-203ENST00000392128 Q9H3A6 140 aa8.86□□□□□ -0.99
SMARCAL1-203ENST00000392128 GNB4Q9HAV0 340 aa8.86□□□□□ -0.99
SMARCAL1-203ENST00000392128 OTORQ9NRC9 128 aa8.86□□□□□ -0.99
SMARCAL1-203ENST00000392128 CDC42EP3Q9UKI2 254 aa8.86□□□□□ -0.99
SMARCAL1-203ENST00000392128 EPDR1Q9UM22 224 aa8.86□□□□□ -0.99
SMARCAL1-203ENST00000392128 TEX15Q9BXT5 2789 aa8.86□□□□□ -0.99
SMARCAL1-203ENST00000392128 TRBV19A0A075B6N1 114 aa8.86□□□□□ -0.99
SMARCAL1-203ENST00000392128 H7BYZ3 331 aa8.86□□□□□ -0.99
SMARCAL1-203ENST00000392128 HOXA3O43365 443 aaPredicted RBP8.86□□□□□ -0.99
SMARCAL1-203ENST00000392128 RAB5AP20339 215 aa8.86□□□□□ -0.99
SMARCAL1-203ENST00000392128 C5orf17Q8NAS9 161 aa8.86□□□□□ -0.99
SMARCAL1-203ENST00000392128 IGF2BP2-AS1Q96M15 143 aa8.86□□□□□ -0.99
SMARCAL1-203ENST00000392128 AURKAIP1Q9NWT8 199 aaPredicted RBP8.86□□□□□ -0.99
SMARCAL1-203ENST00000392128 PPP1R2P9O14990 202 aa8.85□□□□□ -0.99
SMARCAL1-203ENST00000392128 SLC25A5P05141 298 aaKnown RBP8.85□□□□□ -0.99
SMARCAL1-203ENST00000392128 CRYBA1P05813 215 aa8.85□□□□□ -0.99
SMARCAL1-203ENST00000392128 CNN1P51911 297 aaKnown RBP8.85□□□□□ -0.99
SMARCAL1-203ENST00000392128 LYPD1Q8N2G4 141 aa8.85□□□□□ -0.99
SMARCAL1-203ENST00000392128 GCN1Q92616 2671 aaKnown RBP8.85□□□□□ -0.99
SMARCAL1-203ENST00000392128 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.85□□□□□ -0.99
SMARCAL1-203ENST00000392128 H3BTX0 84 aa8.85□□□□□ -0.99
SMARCAL1-203ENST00000392128 K7EN84 100 aa8.85□□□□□ -0.99
SMARCAL1-203ENST00000392128 TCAPO15273 167 aa8.85□□□□□ -0.99
SMARCAL1-203ENST00000392128 PF4V1P10720 104 aa8.85□□□□□ -0.99
SMARCAL1-203ENST00000392128 RPL7P18124 248 aaKnown RBP8.85□□□□□ -0.99
SMARCAL1-203ENST00000392128 RAB9AP51151 201 aa8.85□□□□□ -0.99
SMARCAL1-203ENST00000392128 PDE6HQ13956 83 aa8.85□□□□□ -0.99
SMARCAL1-203ENST00000392128 SFRP2Q96HF1 295 aa8.85□□□□□ -0.99
SMARCAL1-203ENST00000392128 ATG101Q9BSB4 218 aa8.85□□□□□ -0.99
SMARCAL1-203ENST00000392128 C2orf88Q9BSF0 95 aa8.85□□□□□ -0.99
SMARCAL1-203ENST00000392128 URGCP-MRPS24S4R325 110 aa8.85□□□□□ -0.99
SMARCAL1-203ENST00000392128 UNC79Q9P2D8 2635 aa8.85□□□□□ -0.99
SMARCAL1-203ENST00000392128 IGHV3-35A0A0C4DH35 117 aa8.84□□□□□ -0.99
SMARCAL1-203ENST00000392128 A0A0G2JLM5 398 aa8.84□□□□□ -0.99
SMARCAL1-203ENST00000392128 TMEM89A2RUT3 159 aa8.84□□□□□ -0.99
SMARCAL1-203ENST00000392128 TEX38Q6PEX7 206 aa8.84□□□□□ -0.99
SMARCAL1-203ENST00000392128 PRSS22Q9GZN4 317 aa8.84□□□□□ -0.99
SMARCAL1-203ENST00000392128 NPFFR1Q9GZQ6 430 aa8.84□□□□□ -0.99
SMARCAL1-203ENST00000392128 KLK15Q9H2R5 256 aa8.84□□□□□ -0.99
SMARCAL1-203ENST00000392128 KLF12Q9Y4X4 402 aa8.84□□□□□ -0.99
SMARCAL1-203ENST00000392128 CLPSL1A2RUU4 121 aa8.84□□□□□ -0.99
SMARCAL1-203ENST00000392128 PPP5D1E7EU14 171 aa8.84□□□□□ -0.99
SMARCAL1-203ENST00000392128 CD5LO43866 347 aa8.84□□□□□ -0.99
SMARCAL1-203ENST00000392128 IGHG4P01861 327 aa8.84□□□□□ -0.99
SMARCAL1-203ENST00000392128 CXCL1P09341 107 aa8.84□□□□□ -0.99
SMARCAL1-203ENST00000392128 G0S2P27469 103 aa8.84□□□□□ -0.99
SMARCAL1-203ENST00000392128 ARL3P36405 182 aa8.84□□□□□ -0.99
SMARCAL1-203ENST00000392128 GNG5P63218 68 aa8.84□□□□□ -0.99
SMARCAL1-203ENST00000392128 KRTAP1-1Q07627 177 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms