RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 IQCF6A8MYZ5 107 aa11.77□□□□□ -0.53
VPS9D1-201ENST00000389386 NPIPB6E9PJ23 425 aa11.77□□□□□ -0.53
VPS9D1-201ENST00000389386 FXYD2P54710 66 aa11.77□□□□□ -0.53
VPS9D1-201ENST00000389386 LOXL1Q08397 574 aaPredicted RBP11.77□□□□□ -0.53
VPS9D1-201ENST00000389386 UTF1Q5T230 341 aa11.77□□□□□ -0.53
VPS9D1-201ENST00000389386 PHLDA1Q8WV24 401 aaPredicted RBP11.77□□□□□ -0.53
VPS9D1-201ENST00000389386 SIGLEC8Q9NYZ4 499 aa11.77□□□□□ -0.53
VPS9D1-201ENST00000389386 F11RQ9Y624 299 aaKnown RBP11.77□□□□□ -0.53
VPS9D1-201ENST00000389386 PIEZO1Q92508 2521 aa11.77□□□□□ -0.53
VPS9D1-201ENST00000389386 DLL1O00548 723 aa11.76□□□□□ -0.53
VPS9D1-201ENST00000389386 CACNG7P62955 275 aa11.76□□□□□ -0.53
VPS9D1-201ENST00000389386 SSBP2P81877 361 aaPredicted RBP11.76□□□□□ -0.53
VPS9D1-201ENST00000389386 FOXC1Q12948 553 aa11.76□□□□□ -0.53
VPS9D1-201ENST00000389386 POU2AF1Q16633 256 aa11.76□□□□□ -0.53
VPS9D1-201ENST00000389386 PDPNQ86YL7 162 aa11.76□□□□□ -0.53
VPS9D1-201ENST00000389386 CD177Q8N6Q3 437 aa11.76□□□□□ -0.53
VPS9D1-201ENST00000389386 OR5AN1Q8NGI8 311 aa11.76□□□□□ -0.53
VPS9D1-201ENST00000389386 OBP2BQ9NPH6 170 aa11.76□□□□□ -0.53
VPS9D1-201ENST00000389386 CHD8Q9HCK8 2581 aa11.76□□□□□ -0.53
VPS9D1-201ENST00000389386 TRGV5A0A0B4J1U4 118 aa11.76□□□□□ -0.53
VPS9D1-201ENST00000389386 TBC1D28Q2M2D7 210 aa11.76□□□□□ -0.53
VPS9D1-201ENST00000389386 BCL6BQ8N143 479 aaPredicted RBP11.76□□□□□ -0.53
VPS9D1-201ENST00000389386 OR1L4Q8NGR5 311 aa11.76□□□□□ -0.53
VPS9D1-201ENST00000389386 OR1L8Q8NGR8 309 aa11.76□□□□□ -0.53
VPS9D1-201ENST00000389386 A0A1W2PRD5 423 aa11.75□□□□□ -0.53
VPS9D1-201ENST00000389386 A0A1W2PRF3 423 aa11.75□□□□□ -0.53
VPS9D1-201ENST00000389386 A0A1W2PRM7 423 aa11.75□□□□□ -0.53
VPS9D1-201ENST00000389386 GCSHP23434 173 aa11.75□□□□□ -0.53
VPS9D1-201ENST00000389386 NMUP48645 174 aa11.75□□□□□ -0.53
VPS9D1-201ENST00000389386 FDCSPQ8NFU4 85 aa11.75□□□□□ -0.53
VPS9D1-201ENST00000389386 CACNG8Q8WXS5 425 aa11.75□□□□□ -0.53
VPS9D1-201ENST00000389386 DYSFO75923 2080 aa11.75□□□□□ -0.53
VPS9D1-201ENST00000389386 HEATR1Q9H583 2144 aaKnown RBP11.75□□□□□ -0.53
VPS9D1-201ENST00000389386 K7ERJ3 54 aa11.75□□□□□ -0.53
VPS9D1-201ENST00000389386 UPK2O00526 184 aa11.75□□□□□ -0.53
VPS9D1-201ENST00000389386 IFI27P40305 119 aaPredicted RBP11.75□□□□□ -0.53
VPS9D1-201ENST00000389386 SH2D6Q7Z4S9 175 aa11.75□□□□□ -0.53
VPS9D1-201ENST00000389386 FMC1Q96HJ9 113 aa11.75□□□□□ -0.53
VPS9D1-201ENST00000389386 LYZL6O75951 148 aa11.74□□□□□ -0.53
VPS9D1-201ENST00000389386 TSPAN13O95857 204 aa11.74□□□□□ -0.53
VPS9D1-201ENST00000389386 CRYGCP07315 174 aa11.74□□□□□ -0.53
VPS9D1-201ENST00000389386 ETDBQ3ZM63 59 aa11.74□□□□□ -0.53
VPS9D1-201ENST00000389386 LEAP2Q969E1 77 aa11.74□□□□□ -0.53
VPS9D1-201ENST00000389386 NCOR2Q9Y618 2525 aa11.74□□□□□ -0.53
VPS9D1-201ENST00000389386 A0A1B0GUT8 65 aa11.73□□□□□ -0.53
VPS9D1-201ENST00000389386 E9PLD3 99 aa11.73□□□□□ -0.53
VPS9D1-201ENST00000389386 PLAUP00749 431 aa11.73□□□□□ -0.53
VPS9D1-201ENST00000389386 GATD1Q8NB37 220 aa11.73□□□□□ -0.53
VPS9D1-201ENST00000389386 SS18L2Q9UHA2 77 aa11.73□□□□□ -0.53
VPS9D1-201ENST00000389386 TCRBV4S1A1TA0A5B7 111 aa11.73□□□□□ -0.53
VPS9D1-201ENST00000389386 SAA2P0DJI9 122 aaPredicted RBP11.73□□□□□ -0.53
VPS9D1-201ENST00000389386 PRDX2P32119 198 aa11.73□□□□□ -0.53
VPS9D1-201ENST00000389386 MPV17P39210 176 aa11.73□□□□□ -0.53
VPS9D1-201ENST00000389386 ATP5G2Q06055 141 aa11.73□□□□□ -0.53
VPS9D1-201ENST00000389386 CT45A1Q5HYN5 189 aa11.73□□□□□ -0.53
VPS9D1-201ENST00000389386 SLC25A48Q6ZT89 311 aaKnown RBP11.73□□□□□ -0.53
VPS9D1-201ENST00000389386 CT45A3Q8NHU0 189 aa11.73□□□□□ -0.53
VPS9D1-201ENST00000389386 HIGD1BQ9P298 99 aa11.73□□□□□ -0.53
VPS9D1-201ENST00000389386 ARMS2P0C7Q2 107 aa11.73□□□□□ -0.53
VPS9D1-201ENST00000389386 COL8A1P27658 744 aa11.73□□□□□ -0.53
VPS9D1-201ENST00000389386 DEFB109BQ30KR1 87 aa11.73□□□□□ -0.53
VPS9D1-201ENST00000389386 ZNF414Q96IQ9 312 aa11.73□□□□□ -0.53
VPS9D1-201ENST00000389386 PCNX1Q96RV3 2341 aa11.72□□□□□ -0.53
VPS9D1-201ENST00000389386 LINC00305Q7Z4B0 112 aa11.72□□□□□ -0.53
VPS9D1-201ENST00000389386 ARPC1AQ92747 370 aa11.72□□□□□ -0.53
VPS9D1-201ENST00000389386 CXXC4Q9H2H0 198 aa11.72□□□□□ -0.53
VPS9D1-201ENST00000389386 MRPL16Q9NX20 251 aaKnown RBP11.72□□□□□ -0.53
VPS9D1-201ENST00000389386 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.72□□□□□ -0.53
VPS9D1-201ENST00000389386 CT45A6P0DMU7 189 aa11.72□□□□□ -0.53
VPS9D1-201ENST00000389386 CT45A5P0DMU8 189 aa11.72□□□□□ -0.53
VPS9D1-201ENST00000389386 CT45A7P0DMV0 189 aa11.72□□□□□ -0.53
VPS9D1-201ENST00000389386 HERV-K104P63124 156 aa11.72□□□□□ -0.53
VPS9D1-201ENST00000389386 RIGQ13278 110 aa11.72□□□□□ -0.53
VPS9D1-201ENST00000389386 CNEP1R1Q8N9A8 125 aa11.72□□□□□ -0.53
VPS9D1-201ENST00000389386 ROS1P08922 2347 aa11.71□□□□□ -0.53
VPS9D1-201ENST00000389386 KBTBD11-OT1A0A1B0GTJ5 212 aa11.71□□□□□ -0.53
VPS9D1-201ENST00000389386 TCRAP04437 139 aa11.71□□□□□ -0.53
VPS9D1-201ENST00000389386 CT45A10P0DMU9 189 aa11.71□□□□□ -0.53
VPS9D1-201ENST00000389386 ODF1Q14990 250 aa11.71□□□□□ -0.53
VPS9D1-201ENST00000389386 KLF14Q8TD94 323 aaPredicted RBP11.71□□□□□ -0.53
VPS9D1-201ENST00000389386 SCNM1Q9BWG6 230 aa11.71□□□□□ -0.53
VPS9D1-201ENST00000389386 SMG1Q96Q15 3661 aaKnown RBP11.71□□□□□ -0.54
VPS9D1-201ENST00000389386 IGKV1D-37A0A075B6S9 117 aa11.71□□□□□ -0.54
VPS9D1-201ENST00000389386 GATA3P23771 443 aa11.71□□□□□ -0.54
VPS9D1-201ENST00000389386 INSL3P51460 131 aa11.71□□□□□ -0.54
VPS9D1-201ENST00000389386 CIARTQ8N365 385 aaPredicted RBP11.71□□□□□ -0.54
VPS9D1-201ENST00000389386 MTURNQ8N3F0 131 aa11.71□□□□□ -0.54
VPS9D1-201ENST00000389386 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.71□□□□□ -0.54
VPS9D1-201ENST00000389386 LOC389332A0A1B0GUA5 103 aa11.7□□□□□ -0.54
VPS9D1-201ENST00000389386 CFHR2P36980 270 aa11.7□□□□□ -0.54
VPS9D1-201ENST00000389386 KIR2DL2P43627 348 aaPredicted RBP11.7□□□□□ -0.54
VPS9D1-201ENST00000389386 TMEM178AQ8NBL3 297 aa11.7□□□□□ -0.54
VPS9D1-201ENST00000389386 NPIPB3Q92617 1050 aa11.7□□□□□ -0.54
VPS9D1-201ENST00000389386 IGLL5B9A064 214 aa11.7□□□□□ -0.54
VPS9D1-201ENST00000389386 H3BMG7 143 aa11.7□□□□□ -0.54
VPS9D1-201ENST00000389386 PIFOQ8TCI5 191 aa11.7□□□□□ -0.54
VPS9D1-201ENST00000389386 IFI27L1Q96BM0 104 aa11.7□□□□□ -0.54
VPS9D1-201ENST00000389386 NHP2Q9NX24 153 aaKnown RBP11.7□□□□□ -0.54
VPS9D1-201ENST00000389386 DKK2Q9UBU2 259 aa11.7□□□□□ -0.54
VPS9D1-201ENST00000389386 ZNF785A8K8V0 405 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms