RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 IGKV1D-12P01611 117 aa4.71□□□□□ -1.66
RFC1-202ENST00000381897 HERVK_113P61574 105 aa4.71□□□□□ -1.66
RFC1-202ENST00000381897 Q6ZSR3 168 aa4.71□□□□□ -1.66
RFC1-202ENST00000381897 FAM222BQ8WU58 562 aa4.71□□□□□ -1.66
RFC1-202ENST00000381897 TMEM190Q8WZ59 177 aa4.71□□□□□ -1.66
RFC1-202ENST00000381897 SPANXDQ9BXN6 97 aa4.71□□□□□ -1.66
RFC1-202ENST00000381897 NOTCH4Q99466 2003 aa4.7□□□□□ -1.66
RFC1-202ENST00000381897 IGKV1-27A0A075B6S5 117 aa4.7□□□□□ -1.66
RFC1-202ENST00000381897 H3BRM9 83 aa4.7□□□□□ -1.66
RFC1-202ENST00000381897 IGKV1-5P01602 117 aa4.7□□□□□ -1.66
RFC1-202ENST00000381897 FCER1GP30273 86 aa4.7□□□□□ -1.66
RFC1-202ENST00000381897 PLGLAQ15195 96 aa4.7□□□□□ -1.66
RFC1-202ENST00000381897 TIMM23BQ5SRD1 257 aa4.7□□□□□ -1.66
RFC1-202ENST00000381897 DEFB125Q8N687 156 aa4.7□□□□□ -1.66
RFC1-202ENST00000381897 OR10D3Q8NH80 312 aa4.7□□□□□ -1.66
RFC1-202ENST00000381897 PRELID3AQ96N28 172 aa4.7□□□□□ -1.66
RFC1-202ENST00000381897 MRPL16Q9NX20 251 aaKnown RBP4.7□□□□□ -1.66
RFC1-202ENST00000381897 NUP210LQ5VU65 1888 aa4.7□□□□□ -1.66
RFC1-202ENST00000381897 SPAG17Q6Q759 2223 aa4.7□□□□□ -1.66
RFC1-202ENST00000381897 A0A1W2PRE2 83 aa4.7□□□□□ -1.66
RFC1-202ENST00000381897 H3BUT2 72 aa4.7□□□□□ -1.66
RFC1-202ENST00000381897 NDUFS7O75251 213 aa4.7□□□□□ -1.66
RFC1-202ENST00000381897 NEURL1O76050 574 aa4.7□□□□□ -1.66
RFC1-202ENST00000381897 LIFP15018 202 aa4.7□□□□□ -1.66
RFC1-202ENST00000381897 PSG3Q16557 428 aa4.7□□□□□ -1.66
RFC1-202ENST00000381897 C16orf47Q6ZP98 133 aaPredicted RBP4.7□□□□□ -1.66
RFC1-202ENST00000381897 ZNF788Q6ZQV5 615 aa4.7□□□□□ -1.66
RFC1-202ENST00000381897 VSTM2AQ8TAG5 236 aa4.7□□□□□ -1.66
RFC1-202ENST00000381897 TDRD6O60522 2096 aaKnown RBP4.7□□□□□ -1.66
RFC1-202ENST00000381897 MUC21A0A0G2JKD1 596 aa4.7□□□□□ -1.66
RFC1-202ENST00000381897 MUC21A0A140T8X8 626 aa4.7□□□□□ -1.66
RFC1-202ENST00000381897 PSG9Q00887 426 aa4.7□□□□□ -1.66
RFC1-202ENST00000381897 Q1RN00 199 aa4.7□□□□□ -1.66
RFC1-202ENST00000381897 FDCSPQ8NFU4 85 aa4.7□□□□□ -1.66
RFC1-202ENST00000381897 C11orf52Q96A22 123 aa4.7□□□□□ -1.66
RFC1-202ENST00000381897 SSBP4Q9BWG4 385 aaPredicted RBP4.7□□□□□ -1.66
RFC1-202ENST00000381897 IGHV1OR15-9A0A0B4J2B8 117 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 SYS1-DBNDD2H3BUS1 97 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 PTGDSP41222 190 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 BVES-AS1Q5T3Y7 98 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 C10orf113Q5VZT2 155 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 APRG1Q8IVJ8 170 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 NABP1Q96AH0 204 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 FANCMQ8IYD8 2048 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 IGHV1OR21-1A0A087WYE8 117 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 A0A0G2JRQ6 117 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 K7EP34 96 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 PATE4P0C8F1 98 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 GABRG2P18507 467 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 SEC61BP60468 96 aaKnown RBP4.69□□□□□ -1.66
RFC1-202ENST00000381897 HIST1H4AP62805 103 aaKnown RBP4.69□□□□□ -1.66
RFC1-202ENST00000381897 RPEQ96AT9 228 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 AMMECR1Q9Y4X0 333 aaPredicted RBP4.69□□□□□ -1.66
RFC1-202ENST00000381897 A0A0G2JLM5 398 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 OR2T8A6NH00 312 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 C9orf118A6NHY6 69 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 CGAP01215 116 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 SPINK8P0C7L1 97 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 RHOGP84095 191 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 C18orf15Q96N68 181 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 NABP2Q9BQ15 211 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 CXXC4Q9H2H0 198 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 SYNGR1O43759 233 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 NUPR1O60356 82 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 PAX8Q06710 450 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 ZNF146Q15072 292 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 OR8A1Q8NGG7 326 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 UBALD1Q8TB05 177 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 C18orf32Q8TCD1 76 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 RNASE7Q9H1E1 156 aaKnown RBP4.69□□□□□ -1.66
RFC1-202ENST00000381897 DYNLRB1Q9NP97 96 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 FREM3P0C091 2139 aa4.69□□□□□ -1.66
RFC1-202ENST00000381897 IGKV1D-33P01593 117 aa4.68□□□□□ -1.66
RFC1-202ENST00000381897 IGKV1-33P01594 117 aa4.68□□□□□ -1.66
RFC1-202ENST00000381897 IGLL1P15814 213 aa4.68□□□□□ -1.66
RFC1-202ENST00000381897 COL8A1P27658 744 aa4.68□□□□□ -1.66
RFC1-202ENST00000381897 RBM3P98179 157 aaKnown RBP4.68□□□□□ -1.66
RFC1-202ENST00000381897 SLC35E4Q6ICL7 350 aa4.68□□□□□ -1.66
RFC1-202ENST00000381897 V9GYV3 84 aa4.68□□□□□ -1.66
RFC1-202ENST00000381897 DENND4CQ5VZ89 1909 aa4.68□□□□□ -1.66
RFC1-202ENST00000381897 WDFY4Q6ZS81 3184 aa4.68□□□□□ -1.66
RFC1-202ENST00000381897 CSN3P07498 182 aa4.68□□□□□ -1.66
RFC1-202ENST00000381897 TDRG1Q3Y452 100 aa4.68□□□□□ -1.66
RFC1-202ENST00000381897 GAGE13Q4V321 117 aa4.68□□□□□ -1.66
RFC1-202ENST00000381897 COX8CQ7Z4L0 72 aa4.68□□□□□ -1.66
RFC1-202ENST00000381897 GGTLC1Q9BX51 225 aa4.68□□□□□ -1.66
RFC1-202ENST00000381897 RPP21Q9H633 154 aaKnown RBP4.68□□□□□ -1.66
RFC1-202ENST00000381897 SEC16AO15027 2179 aa4.68□□□□□ -1.66
RFC1-202ENST00000381897 FRYLO94915 3013 aa4.68□□□□□ -1.66
RFC1-202ENST00000381897 SMIM27A0A1W2PRY6 76 aa4.68□□□□□ -1.66
RFC1-202ENST00000381897 FNDC10F2Z333 226 aa4.68□□□□□ -1.66
RFC1-202ENST00000381897 F8W735 103 aaPredicted RBP4.68□□□□□ -1.66
RFC1-202ENST00000381897 H3BVH4 76 aa4.68□□□□□ -1.66
RFC1-202ENST00000381897 IGHV3-9P01782 118 aa4.68□□□□□ -1.66
RFC1-202ENST00000381897 CTRLP40313 264 aa4.68□□□□□ -1.66
RFC1-202ENST00000381897 NMUP48645 174 aa4.68□□□□□ -1.66
RFC1-202ENST00000381897 HSPE1P61604 102 aaKnown RBP4.68□□□□□ -1.66
RFC1-202ENST00000381897 REG3AQ06141 175 aa4.68□□□□□ -1.66
RFC1-202ENST00000381897 EFNB3Q15768 340 aa4.68□□□□□ -1.66
RFC1-202ENST00000381897 TREML4Q6UXN2 200 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms