RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 C3orf79P0CE67 100 aa13.94□□□□□ -0.18
SGCB-201ENST00000381431 OR5AN1Q8NGI8 311 aa13.94□□□□□ -0.18
SGCB-201ENST00000381431 TPTE2P1Q5T6R2 138 aa13.94□□□□□ -0.18
SGCB-201ENST00000381431 VMO1Q7Z5L0 202 aa13.94□□□□□ -0.18
SGCB-201ENST00000381431 H3BUT2 72 aa13.93□□□□□ -0.18
SGCB-201ENST00000381431 CD7P09564 240 aa13.93□□□□□ -0.18
SGCB-201ENST00000381431 C5orf64Q2M2E5 130 aa13.93□□□□□ -0.18
SGCB-201ENST00000381431 DEFB104AQ8WTQ1 72 aa13.93□□□□□ -0.18
SGCB-201ENST00000381431 ARHGAP21Q5T5U3 1957 aa13.93□□□□□ -0.18
SGCB-201ENST00000381431 E7EQL1 145 aa13.93□□□□□ -0.18
SGCB-201ENST00000381431 BUB1B-PAK6H3BSN5 160 aa13.93□□□□□ -0.18
SGCB-201ENST00000381431 C1orf194Q5T5A4 169 aa13.93□□□□□ -0.18
SGCB-201ENST00000381431 ITLN2Q8WWU7 325 aaPredicted RBP13.93□□□□□ -0.18
SGCB-201ENST00000381431 MMP23AO75900 390 aa13.93□□□□□ -0.18
SGCB-201ENST00000381431 IFI27L1Q96BM0 104 aa13.93□□□□□ -0.18
SGCB-201ENST00000381431 ZNF134P52741 427 aa13.92□□□□□ -0.18
SGCB-201ENST00000381431 BRD3OSQ6XYD6 125 aa13.92□□□□□ -0.18
SGCB-201ENST00000381431 ATP5L2Q7Z4Y8 100 aa13.92□□□□□ -0.18
SGCB-201ENST00000381431 TYMSP04818 313 aa13.91□□□□□ -0.18
SGCB-201ENST00000381431 NUP37Q8NFH4 326 aa13.91□□□□□ -0.18
SGCB-201ENST00000381431 JMJD8Q96S16 334 aa13.91□□□□□ -0.18
SGCB-201ENST00000381431 MRPL16Q9NX20 251 aaKnown RBP13.91□□□□□ -0.18
SGCB-201ENST00000381431 FRMPD3Q5JV73 1810 aa13.91□□□□□ -0.18
SGCB-201ENST00000381431 D6R8Y8 96 aa13.91□□□□□ -0.18
SGCB-201ENST00000381431 SUMO2P61956 95 aaKnown RBP13.91□□□□□ -0.18
SGCB-201ENST00000381431 LYZL1Q6UWQ5 148 aa13.91□□□□□ -0.18
SGCB-201ENST00000381431 PCDH15Q96QU1 1955 aa13.91□□□□□ -0.18
SGCB-201ENST00000381431 PLXNB3Q9ULL4 1909 aa13.91□□□□□ -0.18
SGCB-201ENST00000381431 UBE2L6O14933 153 aa13.91□□□□□ -0.18
SGCB-201ENST00000381431 NDPQ00604 133 aa13.91□□□□□ -0.18
SGCB-201ENST00000381431 PAX8Q06710 450 aa13.91□□□□□ -0.18
SGCB-201ENST00000381431 MEIG1Q5JSS6 88 aa13.91□□□□□ -0.18
SGCB-201ENST00000381431 SPCS1Q9Y6A9 102 aa13.91□□□□□ -0.18
SGCB-201ENST00000381431 ABCA2Q9BZC7 2435 aa13.91□□□□□ -0.18
SGCB-201ENST00000381431 TMEM14BQ9NUH8 114 aa13.91□□□□□ -0.18
SGCB-201ENST00000381431 NHP2Q9NX24 153 aaKnown RBP13.91□□□□□ -0.18
SGCB-201ENST00000381431 TNFRSF18Q9Y5U5 241 aa13.91□□□□□ -0.18
SGCB-201ENST00000381431 PAPPA-AS1Q5QFB9 102 aa13.9□□□□□ -0.18
SGCB-201ENST00000381431 VDAC2P45880 294 aaPredicted RBP13.9□□□□□ -0.18
SGCB-201ENST00000381431 ZNF114Q8NC26 417 aa13.9□□□□□ -0.18
SGCB-201ENST00000381431 PLXNB1O43157 2135 aa13.9□□□□□ -0.18
SGCB-201ENST00000381431 NAA38Q9BRA0 125 aaKnown RBP13.9□□□□□ -0.18
SGCB-201ENST00000381431 hDV102S1A0JD36 115 aa13.89□□□□□ -0.19
SGCB-201ENST00000381431 C19orf67A6NJJ6 358 aa13.89□□□□□ -0.19
SGCB-201ENST00000381431 LYPD6Q86Y78 171 aa13.89□□□□□ -0.19
SGCB-201ENST00000381431 FAM169BQ8N8A8 192 aa13.89□□□□□ -0.19
SGCB-201ENST00000381431 C11orf44Q8N8P7 122 aa13.89□□□□□ -0.19
SGCB-201ENST00000381431 LY96Q9Y6Y9 160 aa13.89□□□□□ -0.19
SGCB-201ENST00000381431 CNTFRP26992 372 aa13.89□□□□□ -0.19
SGCB-201ENST00000381431 FAM181BA6NEQ2 426 aa13.89□□□□□ -0.19
SGCB-201ENST00000381431 DUX3Q96PT4 197 aa13.89□□□□□ -0.19
SGCB-201ENST00000381431 FGF23Q9GZV9 251 aaPredicted RBP13.89□□□□□ -0.19
SGCB-201ENST00000381431 C10orf91Q5T1B1 145 aa13.89□□□□□ -0.19
SGCB-201ENST00000381431 FNDC4Q9H6D8 234 aaPredicted RBP13.89□□□□□ -0.19
SGCB-201ENST00000381431 NXT2Q9NPJ8 142 aaKnown RBP13.89□□□□□ -0.19
SGCB-201ENST00000381431 PCNX3Q9H6A9 2034 aa13.88□□□□□ -0.19
SGCB-201ENST00000381431 PPP1R17O96001 155 aa13.88□□□□□ -0.19
SGCB-201ENST00000381431 PPBPP02775 128 aa13.88□□□□□ -0.19
SGCB-201ENST00000381431 CHCHD1Q96BP2 118 aaKnown RBP13.88□□□□□ -0.19
SGCB-201ENST00000381431 A0A1W2PRX2 142 aa13.88□□□□□ -0.19
SGCB-201ENST00000381431 C17orf58Q2M2W7 97 aa13.88□□□□□ -0.19
SGCB-201ENST00000381431 ZNF418Q8TF45 676 aaPredicted RBP13.88□□□□□ -0.19
SGCB-201ENST00000381431 TRAV41A0A0B4J266 112 aa13.88□□□□□ -0.19
SGCB-201ENST00000381431 TRAV21A0A0B4J279 112 aa13.87□□□□□ -0.19
SGCB-201ENST00000381431 A0A1B0GWB2 263 aa13.87□□□□□ -0.19
SGCB-201ENST00000381431 DTX1Q86Y01 620 aa13.87□□□□□ -0.19
SGCB-201ENST00000381431 NPFFR1Q9GZQ6 430 aa13.87□□□□□ -0.19
SGCB-201ENST00000381431 C15orf65H3BRN8 121 aa13.87□□□□□ -0.19
SGCB-201ENST00000381431 ASPHD1Q5U4P2 390 aa13.87□□□□□ -0.19
SGCB-201ENST00000381431 ALKBH7Q9BT30 221 aaPredicted RBP13.87□□□□□ -0.19
SGCB-201ENST00000381431 NPFFO15130 113 aa13.86□□□□□ -0.19
SGCB-201ENST00000381431 EFNA4P52798 201 aa13.86□□□□□ -0.19
SGCB-201ENST00000381431 CIRBPQ14011 172 aaKnown RBP13.86□□□□□ -0.19
SGCB-201ENST00000381431 TANC1Q9C0D5 1861 aa13.86□□□□□ -0.19
SGCB-201ENST00000381431 ITGB1BP1O14713 200 aa13.86□□□□□ -0.19
SGCB-201ENST00000381431 DKK1O94907 266 aa13.86□□□□□ -0.19
SGCB-201ENST00000381431 MRAP2Q96G30 205 aa13.86□□□□□ -0.19
SGCB-201ENST00000381431 GGTLC3B5MD39 225 aa13.86□□□□□ -0.19
SGCB-201ENST00000381431 H7C1H1 209 aa13.86□□□□□ -0.19
SGCB-201ENST00000381431 ZNF329Q86UD4 541 aa13.86□□□□□ -0.19
SGCB-201ENST00000381431 LSM4Q9Y4Z0 139 aaKnown RBP13.86□□□□□ -0.19
SGCB-201ENST00000381431 SMKR1H3BMG3 65 aa13.85□□□□□ -0.19
SGCB-201ENST00000381431 SMAGPQ0VAQ4 97 aa13.85□□□□□ -0.19
SGCB-201ENST00000381431 AMN1Q8IY45 258 aa13.85□□□□□ -0.19
SGCB-201ENST00000381431 LINC01587Q99440 93 aa13.85□□□□□ -0.19
SGCB-201ENST00000381431 RNF5Q99942 180 aa13.85□□□□□ -0.19
SGCB-201ENST00000381431 WT1-ASQ06250 92 aa13.85□□□□□ -0.19
SGCB-201ENST00000381431 DIAPH2-AS1Q14236 149 aa13.85□□□□□ -0.19
SGCB-201ENST00000381431 TMEM155Q4W5P6 130 aa13.85□□□□□ -0.19
SGCB-201ENST00000381431 H3BUX3 64 aa13.85□□□□□ -0.19
SGCB-201ENST00000381431 SIGLEC15Q6ZMC9 328 aa13.85□□□□□ -0.19
SGCB-201ENST00000381431 SSC4DQ8WTU2 575 aa13.85□□□□□ -0.19
SGCB-201ENST00000381431 NDUFA4L2Q9NRX3 87 aa13.85□□□□□ -0.19
SGCB-201ENST00000381431 DPM2O94777 84 aa13.84□□□□□ -0.19
SGCB-201ENST00000381431 ST20Q9HBF5 79 aa13.84□□□□□ -0.19
SGCB-201ENST00000381431 TPSG1Q9NRR2 321 aa13.84□□□□□ -0.19
SGCB-201ENST00000381431 SRRM4A7MD48 611 aaKnown RBP13.84□□□□□ -0.19
SGCB-201ENST00000381431 SRSF1Q07955 248 aaKnown RBP eCLIP13.84□□□□□ -0.19
SGCB-201ENST00000381431 Q8NFD4 153 aa13.84□□□□□ -0.19
SGCB-201ENST00000381431 IGHV2-5P01817 119 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms