RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 Q96MF0 132 aa14.5□□□□□ -0.09
CLSTN1-202ENST00000377298 TOMM7Q9P0U1 55 aa14.5□□□□□ -0.09
CLSTN1-202ENST00000377298 KIAA2026Q5HYC2 2103 aa14.5□□□□□ -0.09
CLSTN1-202ENST00000377298 LYL1P12980 280 aa14.5□□□□□ -0.09
CLSTN1-202ENST00000377298 C1QL4Q86Z23 238 aa14.5□□□□□ -0.09
CLSTN1-202ENST00000377298 FOXC2Q99958 501 aa14.5□□□□□ -0.09
CLSTN1-202ENST00000377298 IGKV2-40A0A087WW87 121 aaPredicted RBP14.49□□□□□ -0.09
CLSTN1-202ENST00000377298 IGKV2D-40P01614 121 aaPredicted RBP14.49□□□□□ -0.09
CLSTN1-202ENST00000377298 LINC00311Q8N616 119 aa14.49□□□□□ -0.09
CLSTN1-202ENST00000377298 ZNF138P52744 262 aa14.49□□□□□ -0.09
CLSTN1-202ENST00000377298 RUSC1-AS1Q66K80 236 aa14.49□□□□□ -0.09
CLSTN1-202ENST00000377298 LCNL1Q6ZST4 164 aa14.49□□□□□ -0.09
CLSTN1-202ENST00000377298 LHFPL4Q7Z7J7 247 aa14.49□□□□□ -0.09
CLSTN1-202ENST00000377298 MPDZO75970 2070 aa14.49□□□□□ -0.09
CLSTN1-202ENST00000377298 ATP5L2Q7Z4Y8 100 aa14.49□□□□□ -0.09
CLSTN1-202ENST00000377298 NXT2Q9NPJ8 142 aaKnown RBP14.49□□□□□ -0.09
CLSTN1-202ENST00000377298 HEATR5AQ86XA9 2040 aa14.49□□□□□ -0.09
CLSTN1-202ENST00000377298 A0A1W2PPI3 338 aa14.49□□□□□ -0.09
CLSTN1-202ENST00000377298 ZNF833PQ6ZTB9 187 aa14.49□□□□□ -0.09
CLSTN1-202ENST00000377298 ARL6IP6Q8N6S5 226 aa14.49□□□□□ -0.09
CLSTN1-202ENST00000377298 ZNF688P0C7X2 276 aa14.49□□□□□ -0.09
CLSTN1-202ENST00000377298 LINC00477Q96M19 166 aa14.49□□□□□ -0.09
CLSTN1-202ENST00000377298 LRRK1Q38SD2 2015 aa14.48□□□□□ -0.09
CLSTN1-202ENST00000377298 TRAV8-6A0A0B4J262 113 aa14.48□□□□□ -0.09
CLSTN1-202ENST00000377298 J3QLI3 93 aa14.48□□□□□ -0.09
CLSTN1-202ENST00000377298 CXCL1P09341 107 aa14.48□□□□□ -0.09
CLSTN1-202ENST00000377298 PCNX1Q96RV3 2341 aa14.48□□□□□ -0.09
CLSTN1-202ENST00000377298 DKK1O94907 266 aa14.48□□□□□ -0.09
CLSTN1-202ENST00000377298 PPIFP30405 207 aaKnown RBP14.48□□□□□ -0.09
CLSTN1-202ENST00000377298 C17orf58Q2M2W7 97 aa14.48□□□□□ -0.09
CLSTN1-202ENST00000377298 FAM110DQ8TAY7 271 aaPredicted RBP14.48□□□□□ -0.09
CLSTN1-202ENST00000377298 TMEM242Q9NWH2 141 aa14.48□□□□□ -0.09
CLSTN1-202ENST00000377298 NUDT10Q8NFP7 164 aa14.48□□□□□ -0.09
CLSTN1-202ENST00000377298 RNF166Q96A37 237 aaPredicted RBP14.48□□□□□ -0.09
CLSTN1-202ENST00000377298 NUDT11Q96G61 164 aa14.48□□□□□ -0.09
CLSTN1-202ENST00000377298 HIST1H2BLQ99880 126 aa14.48□□□□□ -0.09
CLSTN1-202ENST00000377298 SSBP4Q9BWG4 385 aaPredicted RBP14.48□□□□□ -0.09
CLSTN1-202ENST00000377298 HIST3H2BBQ8N257 126 aa14.48□□□□□ -0.09
CLSTN1-202ENST00000377298 GNB1LQ9BYB4 327 aa14.48□□□□□ -0.09
CLSTN1-202ENST00000377298 IGLV3-1P01715 115 aa14.47□□□□□ -0.09
CLSTN1-202ENST00000377298 MAPK1IP1LQ8NDC0 245 aa14.47□□□□□ -0.09
CLSTN1-202ENST00000377298 MALP21145 153 aa14.47□□□□□ -0.09
CLSTN1-202ENST00000377298 IFI27P40305 119 aaPredicted RBP14.47□□□□□ -0.09
CLSTN1-202ENST00000377298 NDPQ00604 133 aa14.47□□□□□ -0.09
CLSTN1-202ENST00000377298 TCF23Q7RTU1 214 aa14.47□□□□□ -0.09
CLSTN1-202ENST00000377298 RHPN1-AS1Q9BWJ2 59 aa14.47□□□□□ -0.09
CLSTN1-202ENST00000377298 DAZ1Q9NQZ3 744 aaKnown RBP14.47□□□□□ -0.09
CLSTN1-202ENST00000377298 ZNRD1Q9P1U0 126 aa14.47□□□□□ -0.09
CLSTN1-202ENST00000377298 CRPP02741 224 aa14.47□□□□□ -0.09
CLSTN1-202ENST00000377298 SRSF1Q07955 248 aaKnown RBP eCLIP14.47□□□□□ -0.09
CLSTN1-202ENST00000377298 TMEM14BQ9NUH8 114 aa14.47□□□□□ -0.09
CLSTN1-202ENST00000377298 TRBV24-1A0A075B6N3 115 aa14.46□□□□□ -0.09
CLSTN1-202ENST00000377298 ADCYAP1P18509 176 aa14.46□□□□□ -0.09
CLSTN1-202ENST00000377298 VGLL1Q99990 258 aa14.46□□□□□ -0.09
CLSTN1-202ENST00000377298 KAAG1Q9UBP8 84 aa14.46□□□□□ -0.09
CLSTN1-202ENST00000377298 WFDC12Q8WWY7 111 aa14.46□□□□□ -0.09
CLSTN1-202ENST00000377298 CREBBPQ92793 2442 aa14.46□□□□□ -0.09
CLSTN1-202ENST00000377298 DMRTA1Q5VZB9 504 aa14.46□□□□□ -0.09
CLSTN1-202ENST00000377298 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.46□□□□□ -0.1
CLSTN1-202ENST00000377298 C14orf144Q96I85 54 aa14.46□□□□□ -0.1
CLSTN1-202ENST00000377298 ORMDL2Q53FV1 153 aa14.45□□□□□ -0.1
CLSTN1-202ENST00000377298 GFI1BQ5VTD9 330 aa14.45□□□□□ -0.1
CLSTN1-202ENST00000377298 VCX2Q9H322 139 aa14.45□□□□□ -0.1
CLSTN1-202ENST00000377298 K7EM74 188 aa14.45□□□□□ -0.1
CLSTN1-202ENST00000377298 ATP6V0E1O15342 81 aa14.45□□□□□ -0.1
CLSTN1-202ENST00000377298 SELENOKQ9Y6D0 94 aa14.45□□□□□ -0.1
CLSTN1-202ENST00000377298 CADP27708 2225 aa14.45□□□□□ -0.1
CLSTN1-202ENST00000377298 SERF1AO75920 110 aa14.45□□□□□ -0.1
CLSTN1-202ENST00000377298 FAM19A2Q8N3H0 131 aa14.45□□□□□ -0.1
CLSTN1-202ENST00000377298 RFNGQ9Y644 331 aa14.45□□□□□ -0.1
CLSTN1-202ENST00000377298 LY96Q9Y6Y9 160 aa14.45□□□□□ -0.1
CLSTN1-202ENST00000377298 ADMP35318 185 aa14.45□□□□□ -0.1
CLSTN1-202ENST00000377298 LCN12Q6JVE5 192 aa14.45□□□□□ -0.1
CLSTN1-202ENST00000377298 CYSLTR1Q9Y271 337 aa14.45□□□□□ -0.1
CLSTN1-202ENST00000377298 DOCK7Q96N67 2140 aa14.45□□□□□ -0.1
CLSTN1-202ENST00000377298 DOCK9Q9BZ29 2069 aa14.44□□□□□ -0.1
CLSTN1-202ENST00000377298 PLP1P60201 277 aa14.44□□□□□ -0.1
CLSTN1-202ENST00000377298 DUX4L9Q6RFH8 374 aaPredicted RBP14.44□□□□□ -0.1
CLSTN1-202ENST00000377298 NDUFA4L2Q9NRX3 87 aa14.44□□□□□ -0.1
CLSTN1-202ENST00000377298 SRRM4A7MD48 611 aaKnown RBP14.44□□□□□ -0.1
CLSTN1-202ENST00000377298 ZNF415Q09FC8 603 aa14.44□□□□□ -0.1
CLSTN1-202ENST00000377298 OVOL3O00110 214 aa14.44□□□□□ -0.1
CLSTN1-202ENST00000377298 CR1LQ2VPA4 569 aa14.44□□□□□ -0.1
CLSTN1-202ENST00000377298 HBDP02042 147 aa14.44□□□□□ -0.1
CLSTN1-202ENST00000377298 SHANK2-AS3Q9BTD1 123 aa14.44□□□□□ -0.1
CLSTN1-202ENST00000377298 C1QTNF4Q9BXJ3 329 aa14.44□□□□□ -0.1
CLSTN1-202ENST00000377298 LINC01549A6NIU2 74 aa14.43□□□□□ -0.1
CLSTN1-202ENST00000377298 MLANAQ16655 118 aa14.43□□□□□ -0.1
CLSTN1-202ENST00000377298 LINC01551Q86U37 167 aa14.43□□□□□ -0.1
CLSTN1-202ENST00000377298 TTC9CQ8N5M4 171 aa14.43□□□□□ -0.1
CLSTN1-202ENST00000377298 WNK2Q9Y3S1 2297 aa14.43□□□□□ -0.1
CLSTN1-202ENST00000377298 CA1P00915 261 aaPredicted RBP14.43□□□□□ -0.1
CLSTN1-202ENST00000377298 OR9G4Q8NGQ1 327 aa14.43□□□□□ -0.1
CLSTN1-202ENST00000377298 LINC00614P0C842 121 aa14.43□□□□□ -0.1
CLSTN1-202ENST00000377298 C15orf65H3BRN8 121 aa14.43□□□□□ -0.1
CLSTN1-202ENST00000377298 FCN3O75636 299 aa14.43□□□□□ -0.1
CLSTN1-202ENST00000377298 RPL35AP18077 110 aaKnown RBP14.43□□□□□ -0.1
CLSTN1-202ENST00000377298 PDE6HQ13956 83 aa14.43□□□□□ -0.1
CLSTN1-202ENST00000377298 PSG3Q16557 428 aa14.43□□□□□ -0.1
CLSTN1-202ENST00000377298 BEX4Q9NWD9 120 aaPredicted RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms