RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 GP9P14770 177 aa16.35■□□□□ 0.21
HLA-C-201ENST00000376228 S100A7P31151 101 aa16.35■□□□□ 0.21
HLA-C-201ENST00000376228 SHISA2Q6UWI4 295 aa16.35■□□□□ 0.21
HLA-C-201ENST00000376228 TMEM190Q8WZ59 177 aa16.35■□□□□ 0.21
HLA-C-201ENST00000376228 ZNF414Q96IQ9 312 aa16.35■□□□□ 0.21
HLA-C-201ENST00000376228 PRSS22Q9GZN4 317 aa16.35■□□□□ 0.21
HLA-C-201ENST00000376228 NAT8Q9UHE5 227 aa16.35■□□□□ 0.21
HLA-C-201ENST00000376228 RNF114Q9Y508 228 aa16.35■□□□□ 0.21
HLA-C-201ENST00000376228 M0R036 132 aa16.35■□□□□ 0.21
HLA-C-201ENST00000376228 TGOLN2O43493 480 aa16.35■□□□□ 0.21
HLA-C-201ENST00000376228 PYYP10082 97 aa16.35■□□□□ 0.21
HLA-C-201ENST00000376228 WFDC12Q8WWY7 111 aa16.35■□□□□ 0.21
HLA-C-201ENST00000376228 TCEAL7Q9BRU2 100 aa16.35■□□□□ 0.21
HLA-C-201ENST00000376228 NPFFR1Q9GZQ6 430 aa16.35■□□□□ 0.21
HLA-C-201ENST00000376228 FBN3Q75N90 2809 aa16.34■□□□□ 0.21
HLA-C-201ENST00000376228 A0A1B0GUS0 222 aa16.34■□□□□ 0.21
HLA-C-201ENST00000376228 GPR183P32249 361 aa16.34■□□□□ 0.21
HLA-C-201ENST00000376228 USF2Q15853 346 aaPredicted RBP16.34■□□□□ 0.21
HLA-C-201ENST00000376228 TMEM241Q24JQ0 296 aa16.34■□□□□ 0.21
HLA-C-201ENST00000376228 A0A087WWC5 75 aa16.33■□□□□ 0.2
HLA-C-201ENST00000376228 IGHG4P01861 327 aa16.33■□□□□ 0.2
HLA-C-201ENST00000376228 NBEAP1P0C6P0 100 aa16.33■□□□□ 0.2
HLA-C-201ENST00000376228 KRTAP10-3P60369 221 aa16.33■□□□□ 0.2
HLA-C-201ENST00000376228 KIAA0141Q14154 515 aaPredicted RBP16.33■□□□□ 0.2
HLA-C-201ENST00000376228 CLEC19AQ6UXS0 136 aa16.33■□□□□ 0.2
HLA-C-201ENST00000376228 Q8N2B8 174 aa16.33■□□□□ 0.2
HLA-C-201ENST00000376228 RPUSD4Q96CM3 377 aaKnown RBP16.33■□□□□ 0.2
HLA-C-201ENST00000376228 A0A0G2JLM5 398 aa16.32■□□□□ 0.2
HLA-C-201ENST00000376228 HIST1H1EP10412 219 aaKnown RBP16.32■□□□□ 0.2
HLA-C-201ENST00000376228 MYCNOSP40205 109 aa16.32■□□□□ 0.2
HLA-C-201ENST00000376228 TPPP2P59282 170 aa16.32■□□□□ 0.2
HLA-C-201ENST00000376228 C16orf95Q9H693 158 aa16.32■□□□□ 0.2
HLA-C-201ENST00000376228 TUBA4BQ9H853 241 aa16.32■□□□□ 0.2
HLA-C-201ENST00000376228 ZNF98A6NK75 572 aa16.31■□□□□ 0.2
HLA-C-201ENST00000376228 GGTLC3B5MD39 225 aa16.31■□□□□ 0.2
HLA-C-201ENST00000376228 BMPR1BO00238 502 aa16.31■□□□□ 0.2
HLA-C-201ENST00000376228 NDUFB4O95168 129 aa16.31■□□□□ 0.2
HLA-C-201ENST00000376228 RELQ04864 619 aaPredicted RBP16.31■□□□□ 0.2
HLA-C-201ENST00000376228 FAM209BQ5JX69 171 aa16.31■□□□□ 0.2
HLA-C-201ENST00000376228 BPIFA4PQ86YQ2 179 aa16.31■□□□□ 0.2
HLA-C-201ENST00000376228 ZFAND3Q9H8U3 227 aa16.31■□□□□ 0.2
HLA-C-201ENST00000376228 ZNF702PQ9H963 129 aa16.31■□□□□ 0.2
HLA-C-201ENST00000376228 RPS10P5Q9NQ39 176 aa16.31■□□□□ 0.2
HLA-C-201ENST00000376228 TRRAPQ9Y4A5 3859 aa16.3■□□□□ 0.2
HLA-C-201ENST00000376228 SCO2A0A1W2PP80 73 aa16.3■□□□□ 0.2
HLA-C-201ENST00000376228 PROK1P58294 105 aa16.3■□□□□ 0.2
HLA-C-201ENST00000376228 SUMO1P63165 101 aaKnown RBP16.3■□□□□ 0.2
HLA-C-201ENST00000376228 TOMM20LQ6UXN7 152 aa16.3■□□□□ 0.2
HLA-C-201ENST00000376228 C20orf24Q9BUV8 137 aa16.3■□□□□ 0.2
HLA-C-201ENST00000376228 SMCO4Q9NRQ5 59 aa16.3■□□□□ 0.2
HLA-C-201ENST00000376228 RABAC1Q9UI14 185 aa16.3■□□□□ 0.2
HLA-C-201ENST00000376228 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.29■□□□□ 0.2
HLA-C-201ENST00000376228 MRPS12O15235 138 aaKnown RBP16.29■□□□□ 0.2
HLA-C-201ENST00000376228 PF4V1P10720 104 aa16.29■□□□□ 0.2
HLA-C-201ENST00000376228 PSMB8P28062 276 aa16.29■□□□□ 0.2
HLA-C-201ENST00000376228 RAB9AP51151 201 aa16.29■□□□□ 0.2
HLA-C-201ENST00000376228 ZNF674Q2M3X9 581 aa16.29■□□□□ 0.2
HLA-C-201ENST00000376228 LEMD1Q68G75 181 aa16.29■□□□□ 0.2
HLA-C-201ENST00000376228 ELOVL1Q9BW60 279 aa16.29■□□□□ 0.2
HLA-C-201ENST00000376228 KLK15Q9H2R5 256 aa16.29■□□□□ 0.2
HLA-C-201ENST00000376228 LY96Q9Y6Y9 160 aa16.29■□□□□ 0.2
HLA-C-201ENST00000376228 C9JCJ5 164 aa16.28■□□□□ 0.2
HLA-C-201ENST00000376228 RPL23P62829 140 aaKnown RBP16.28■□□□□ 0.2
HLA-C-201ENST00000376228 C2CD4CQ8TF44 421 aa16.28■□□□□ 0.2
HLA-C-201ENST00000376228 TMEM242Q9NWH2 141 aa16.28■□□□□ 0.2
HLA-C-201ENST00000376228 PRELID1Q9Y255 219 aa16.28■□□□□ 0.2
HLA-C-201ENST00000376228 IGLC2P0DOY2 106 aa16.27■□□□□ 0.2
HLA-C-201ENST00000376228 TMEM88Q6PEY1 159 aa16.27■□□□□ 0.2
HLA-C-201ENST00000376228 ZNF329Q86UD4 541 aa16.27■□□□□ 0.2
HLA-C-201ENST00000376228 OR4F17Q8NGA8 305 aa16.27■□□□□ 0.2
HLA-C-201ENST00000376228 CITED1Q99966 193 aa16.27■□□□□ 0.2
HLA-C-201ENST00000376228 ZNF586Q9NXT0 402 aa16.27■□□□□ 0.2
HLA-C-201ENST00000376228 CRYBB3P26998 211 aa16.26■□□□□ 0.19
HLA-C-201ENST00000376228 TMEM95Q3KNT9 176 aa16.26■□□□□ 0.19
HLA-C-201ENST00000376228 HIST2H2BDQ6DRA6 164 aa16.26■□□□□ 0.19
HLA-C-201ENST00000376228 CBLN2Q8IUK8 224 aa16.26■□□□□ 0.19
HLA-C-201ENST00000376228 LYPD1Q8N2G4 141 aa16.26■□□□□ 0.19
HLA-C-201ENST00000376228 DERL1Q9BUN8 251 aa16.26■□□□□ 0.19
HLA-C-201ENST00000376228 TSPAN4O14817 238 aa16.25■□□□□ 0.19
HLA-C-201ENST00000376228 ELANEP08246 267 aa16.25■□□□□ 0.19
HLA-C-201ENST00000376228 RPL7P18124 248 aaKnown RBP16.25■□□□□ 0.19
HLA-C-201ENST00000376228 ARL3P36405 182 aa16.25■□□□□ 0.19
HLA-C-201ENST00000376228 SLC35B1P78383 322 aa16.25■□□□□ 0.19
HLA-C-201ENST00000376228 PDE6HQ13956 83 aa16.25■□□□□ 0.19
HLA-C-201ENST00000376228 HIST1H2BAQ96A08 127 aa16.25■□□□□ 0.19
HLA-C-201ENST00000376228 CTDSP1Q9GZU7 261 aa16.25■□□□□ 0.19
HLA-C-201ENST00000376228 TRBV19A0A075B6N1 114 aa16.24■□□□□ 0.19
HLA-C-201ENST00000376228 CXorf65A6NEN9 183 aa16.24■□□□□ 0.19
HLA-C-201ENST00000376228 RANP62826 216 aaKnown RBP16.24■□□□□ 0.19
HLA-C-201ENST00000376228 FOXE3Q13461 319 aa16.24■□□□□ 0.19
HLA-C-201ENST00000376228 TEX38Q6PEX7 206 aa16.24■□□□□ 0.19
HLA-C-201ENST00000376228 RNF152Q8N8N0 203 aa16.24■□□□□ 0.19
HLA-C-201ENST00000376228 BLNKQ8WV28 456 aa16.24■□□□□ 0.19
HLA-C-201ENST00000376228 GNB4Q9HAV0 340 aa16.24■□□□□ 0.19
HLA-C-201ENST00000376228 OTORQ9NRC9 128 aa16.24■□□□□ 0.19
HLA-C-201ENST00000376228 U3KQE9 123 aa16.24■□□□□ 0.19
HLA-C-201ENST00000376228 TRBV20OR9-2A0A075B6H5 130 aa16.24■□□□□ 0.19
HLA-C-201ENST00000376228 HELTA6NFD8 242 aa16.24■□□□□ 0.19
HLA-C-201ENST00000376228 NDUFA4O00483 81 aa16.24■□□□□ 0.19
HLA-C-201ENST00000376228 AKR1C3P42330 323 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms