RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 ZNF462Q96JM2 2506 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 KBTBD11-OT1A0A1B0GTJ5 212 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 C16orf97H3BN30 126 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 TSPAN13O95857 204 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 KLRB1Q12918 225 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 WFDC2Q14508 124 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 FAM53AQ6NSI3 398 aaPredicted RBP9.8□□□□□ -0.84
C9orf3-203ENST00000375315 GCSAMQ8N6F7 178 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 PLPPR2Q96GM1 343 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 PGLYRP4Q96LB8 373 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 POLDIP2Q9Y2S7 368 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 ZNF418Q8TF45 676 aaPredicted RBP9.79□□□□□ -0.84
C9orf3-203ENST00000375315 NCR2O95944 276 aa9.79□□□□□ -0.84
C9orf3-203ENST00000375315 CT45A6P0DMU7 189 aa9.79□□□□□ -0.84
C9orf3-203ENST00000375315 CT45A5P0DMU8 189 aa9.79□□□□□ -0.84
C9orf3-203ENST00000375315 CT45A7P0DMV0 189 aa9.79□□□□□ -0.84
C9orf3-203ENST00000375315 CT45A1Q5HYN5 189 aa9.79□□□□□ -0.84
C9orf3-203ENST00000375315 CT45A3Q8NHU0 189 aa9.79□□□□□ -0.84
C9orf3-203ENST00000375315 MRPL32Q9BYC8 188 aaKnown RBP9.79□□□□□ -0.84
C9orf3-203ENST00000375315 IGHV3OR15-7A0A075B7D8 119 aa9.78□□□□□ -0.84
C9orf3-203ENST00000375315 MGST3O14880 152 aa9.78□□□□□ -0.84
C9orf3-203ENST00000375315 GCSHP23434 173 aa9.78□□□□□ -0.84
C9orf3-203ENST00000375315 GTSF1Q8WW33 167 aa9.78□□□□□ -0.84
C9orf3-203ENST00000375315 SLC25A33Q9BSK2 321 aa9.78□□□□□ -0.84
C9orf3-203ENST00000375315 INSIG2Q9Y5U4 225 aa9.78□□□□□ -0.84
C9orf3-203ENST00000375315 ASH1LQ9NR48 2969 aaKnown RBP9.78□□□□□ -0.84
C9orf3-203ENST00000375315 TACC2O95359 2948 aa9.78□□□□□ -0.84
C9orf3-203ENST00000375315 APOHP02749 345 aaPredicted RBP9.78□□□□□ -0.84
C9orf3-203ENST00000375315 CT83Q5H943 113 aa9.78□□□□□ -0.84
C9orf3-203ENST00000375315 ACP7Q6ZNF0 438 aa9.78□□□□□ -0.84
C9orf3-203ENST00000375315 RBPMS2Q6ZRY4 209 aaKnown RBP9.78□□□□□ -0.84
C9orf3-203ENST00000375315 OR8A1Q8NGG7 326 aa9.78□□□□□ -0.84
C9orf3-203ENST00000375315 RTL8AQ9BWD3 113 aa9.78□□□□□ -0.84
C9orf3-203ENST00000375315 A0A1W2PRD5 423 aa9.78□□□□□ -0.84
C9orf3-203ENST00000375315 A0A1W2PRF3 423 aa9.78□□□□□ -0.84
C9orf3-203ENST00000375315 A0A1W2PRM7 423 aa9.78□□□□□ -0.84
C9orf3-203ENST00000375315 BSPH1Q075Z2 132 aa9.78□□□□□ -0.84
C9orf3-203ENST00000375315 LGALS9BQ3B8N2 356 aa9.78□□□□□ -0.84
C9orf3-203ENST00000375315 ETDBQ3ZM63 59 aa9.78□□□□□ -0.84
C9orf3-203ENST00000375315 LGALS9CQ6DKI2 356 aa9.78□□□□□ -0.84
C9orf3-203ENST00000375315 ZNF479Q96JC4 524 aa9.78□□□□□ -0.84
C9orf3-203ENST00000375315 P01737 135 aa9.77□□□□□ -0.85
C9orf3-203ENST00000375315 CCL8P80075 99 aa9.77□□□□□ -0.85
C9orf3-203ENST00000375315 ZNF146Q15072 292 aa9.77□□□□□ -0.85
C9orf3-203ENST00000375315 VKORC1L1Q8N0U8 176 aa9.77□□□□□ -0.85
C9orf3-203ENST00000375315 PRSS3P2Q8NHM4 247 aa9.77□□□□□ -0.85
C9orf3-203ENST00000375315 C7orf69Q9H7B7 122 aa9.77□□□□□ -0.85
C9orf3-203ENST00000375315 TMEM140Q9NV12 185 aa9.77□□□□□ -0.85
C9orf3-203ENST00000375315 CYSLTR1Q9Y271 337 aa9.77□□□□□ -0.85
C9orf3-203ENST00000375315 IGHV3-13P01766 116 aa9.77□□□□□ -0.85
C9orf3-203ENST00000375315 NMUP48645 174 aa9.77□□□□□ -0.85
C9orf3-203ENST00000375315 TM4SF20Q53R12 229 aa9.77□□□□□ -0.85
C9orf3-203ENST00000375315 LRRK2Q5S007 2527 aa9.77□□□□□ -0.85
C9orf3-203ENST00000375315 TRAV3A0A0B4J244 114 aa9.76□□□□□ -0.85
C9orf3-203ENST00000375315 CD40P25942 277 aa9.76□□□□□ -0.85
C9orf3-203ENST00000375315 SH2D6Q7Z4S9 175 aa9.76□□□□□ -0.85
C9orf3-203ENST00000375315 ZNF329Q86UD4 541 aa9.76□□□□□ -0.85
C9orf3-203ENST00000375315 DAZAP1Q96EP5 407 aaKnown RBP9.76□□□□□ -0.85
C9orf3-203ENST00000375315 GFRA4Q9GZZ7 299 aa9.76□□□□□ -0.85
C9orf3-203ENST00000375315 F11RQ9Y624 299 aaKnown RBP9.76□□□□□ -0.85
C9orf3-203ENST00000375315 IGHV3-43A0A0B4J1X8 118 aa9.76□□□□□ -0.85
C9orf3-203ENST00000375315 PRB1P04280 392 aa9.76□□□□□ -0.85
C9orf3-203ENST00000375315 IGHV3-43DP0DP04 118 aa9.76□□□□□ -0.85
C9orf3-203ENST00000375315 TCTAP57738 103 aa9.76□□□□□ -0.85
C9orf3-203ENST00000375315 ERVK11-1P61568 191 aa9.76□□□□□ -0.85
C9orf3-203ENST00000375315 ATP5G2Q06055 141 aa9.76□□□□□ -0.85
C9orf3-203ENST00000375315 EDDM3AQ14507 147 aa9.76□□□□□ -0.85
C9orf3-203ENST00000375315 BCL6BQ8N143 479 aaPredicted RBP9.76□□□□□ -0.85
C9orf3-203ENST00000375315 JPT1Q9UK76 154 aa9.76□□□□□ -0.85
C9orf3-203ENST00000375315 UTP20O75691 2785 aaKnown RBP9.76□□□□□ -0.85
C9orf3-203ENST00000375315 PLAUP00749 431 aa9.76□□□□□ -0.85
C9orf3-203ENST00000375315 C8orf86Q6ZUL3 223 aa9.76□□□□□ -0.85
C9orf3-203ENST00000375315 MOGAT3Q86VF5 341 aa9.76□□□□□ -0.85
C9orf3-203ENST00000375315 TTC9CQ8N5M4 171 aa9.76□□□□□ -0.85
C9orf3-203ENST00000375315 ARPC1AQ92747 370 aa9.76□□□□□ -0.85
C9orf3-203ENST00000375315 FAM234AQ9H0X4 552 aa9.76□□□□□ -0.85
C9orf3-203ENST00000375315 PGPEP1Q9NXJ5 209 aa9.76□□□□□ -0.85
C9orf3-203ENST00000375315 DEFB108AA8MXU0 73 aa9.75□□□□□ -0.85
C9orf3-203ENST00000375315 C1orf162Q8NEQ5 155 aaPredicted RBP9.75□□□□□ -0.85
C9orf3-203ENST00000375315 GPR82Q96P67 336 aa9.75□□□□□ -0.85
C9orf3-203ENST00000375315 SS18L2Q9UHA2 77 aa9.75□□□□□ -0.85
C9orf3-203ENST00000375315 C15orf61A6NNL5 157 aa9.75□□□□□ -0.85
C9orf3-203ENST00000375315 SPINK8P0C7L1 97 aa9.75□□□□□ -0.85
C9orf3-203ENST00000375315 HSPE1P61604 102 aaKnown RBP9.75□□□□□ -0.85
C9orf3-203ENST00000375315 ZNF502Q8TBZ5 544 aa9.75□□□□□ -0.85
C9orf3-203ENST00000375315 Q8TCH9 128 aa9.75□□□□□ -0.85
C9orf3-203ENST00000375315 PAXXQ9BUH6 204 aa9.75□□□□□ -0.85
C9orf3-203ENST00000375315 HINT2Q9BX68 163 aa9.75□□□□□ -0.85
C9orf3-203ENST00000375315 SLC25A2Q9BXI2 301 aa9.75□□□□□ -0.85
C9orf3-203ENST00000375315 METRNQ9UJH8 293 aa9.75□□□□□ -0.85
C9orf3-203ENST00000375315 SLC25A17O43808 307 aa9.74□□□□□ -0.85
C9orf3-203ENST00000375315 PSPNO60542 156 aa9.74□□□□□ -0.85
C9orf3-203ENST00000375315 FXYD2P54710 66 aa9.74□□□□□ -0.85
C9orf3-203ENST00000375315 CACNG7P62955 275 aa9.74□□□□□ -0.85
C9orf3-203ENST00000375315 TMEM177Q53S58 311 aa9.74□□□□□ -0.85
C9orf3-203ENST00000375315 PCP2Q8IVA1 136 aa9.74□□□□□ -0.85
C9orf3-203ENST00000375315 ITLN1Q8WWA0 313 aa9.74□□□□□ -0.85
C9orf3-203ENST00000375315 FAM167A-AS1Q96KT0 104 aa9.74□□□□□ -0.85
C9orf3-203ENST00000375315 S1PR3Q99500 378 aa9.74□□□□□ -0.85
C9orf3-203ENST00000375315 DCHS2Q6V1P9 2916 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms