RNA–Protein interactions for RNA: ENST00000373956.7

PCDH15-204, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 6,931 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-204ENST00000373956 UTF1Q5T230 341 aa5.54□□□□□ -1.52
PCDH15-204ENST00000373956 C9orf139Q6ZV77 190 aa5.54□□□□□ -1.52
PCDH15-204ENST00000373956 HIST3H2BBQ8N257 126 aa5.54□□□□□ -1.52
PCDH15-204ENST00000373956 XCL2Q9UBD3 114 aa5.54□□□□□ -1.52
PCDH15-204ENST00000373956 TTC3P53804 2025 aa5.54□□□□□ -1.52
PCDH15-204ENST00000373956 GAGE12BA1L429 117 aa5.54□□□□□ -1.52
PCDH15-204ENST00000373956 RS1O15537 224 aa5.54□□□□□ -1.52
PCDH15-204ENST00000373956 GAGE7O76087 117 aa5.54□□□□□ -1.52
PCDH15-204ENST00000373956 GAGE12FP0CL80 117 aa5.54□□□□□ -1.52
PCDH15-204ENST00000373956 GAGE12GP0CL81 117 aa5.54□□□□□ -1.52
PCDH15-204ENST00000373956 GAGE12IP0CL82 117 aa5.54□□□□□ -1.52
PCDH15-204ENST00000373956 CEACAM1P13688 526 aa5.54□□□□□ -1.52
PCDH15-204ENST00000373956 RBM3P98179 157 aaKnown RBP5.54□□□□□ -1.52
PCDH15-204ENST00000373956 FBLIM1Q8WUP2 373 aa5.54□□□□□ -1.52
PCDH15-204ENST00000373956 RNF126Q9BV68 326 aa5.54□□□□□ -1.52
PCDH15-204ENST00000373956 SCN3AQ9NY46 2000 aa5.54□□□□□ -1.52
PCDH15-204ENST00000373956 IGHV4-28A0A0C4DH34 117 aa5.54□□□□□ -1.52
PCDH15-204ENST00000373956 SHISA9B4DS77 424 aa5.54□□□□□ -1.52
PCDH15-204ENST00000373956 IGHG2P01859 326 aa5.54□□□□□ -1.52
PCDH15-204ENST00000373956 IGFBP3P17936 291 aaPredicted RBP5.54□□□□□ -1.52
PCDH15-204ENST00000373956 DEFB131AP59861 70 aa5.54□□□□□ -1.52
PCDH15-204ENST00000373956 ATAD5Q96QE3 1844 aa5.54□□□□□ -1.52
PCDH15-204ENST00000373956 TREML4Q6UXN2 200 aa5.53□□□□□ -1.52
PCDH15-204ENST00000373956 SBF1O95248 1867 aa5.53□□□□□ -1.52
PCDH15-204ENST00000373956 SYS1-DBNDD2H3BUS1 97 aa5.53□□□□□ -1.52
PCDH15-204ENST00000373956 GREM1O60565 184 aa5.53□□□□□ -1.52
PCDH15-204ENST00000373956 PRSS57Q6UWY2 283 aa5.53□□□□□ -1.52
PCDH15-204ENST00000373956 AMN1Q8IY45 258 aa5.53□□□□□ -1.52
PCDH15-204ENST00000373956 C15orf53Q8NAA6 179 aa5.53□□□□□ -1.52
PCDH15-204ENST00000373956 SP7Q8TDD2 431 aaPredicted RBP5.53□□□□□ -1.52
PCDH15-204ENST00000373956 TMEM141Q96I45 108 aa5.53□□□□□ -1.52
PCDH15-204ENST00000373956 TRGV9Q99603 122 aa5.53□□□□□ -1.52
PCDH15-204ENST00000373956 A0A0A6YYD4 124 aa5.53□□□□□ -1.52
PCDH15-204ENST00000373956 TRAV3A0A0B4J244 114 aa5.53□□□□□ -1.52
PCDH15-204ENST00000373956 TRAV26-2A0A0B4J265 109 aa5.53□□□□□ -1.52
PCDH15-204ENST00000373956 MBD3L4A6NDZ8 208 aaPredicted RBP5.53□□□□□ -1.52
PCDH15-204ENST00000373956 MBD3L3A6NE82 208 aaPredicted RBP5.53□□□□□ -1.52
PCDH15-204ENST00000373956 MBD3L5A6NJ08 208 aaPredicted RBP5.53□□□□□ -1.52
PCDH15-204ENST00000373956 AMBPP02760 352 aa5.53□□□□□ -1.52
PCDH15-204ENST00000373956 EFNA4P52798 201 aa5.53□□□□□ -1.52
PCDH15-204ENST00000373956 APOC4P55056 127 aa5.53□□□□□ -1.52
PCDH15-204ENST00000373956 IGLV3-21P80748 117 aaPredicted RBP5.53□□□□□ -1.52
PCDH15-204ENST00000373956 HEPN1Q6WQI6 88 aa5.53□□□□□ -1.52
PCDH15-204ENST00000373956 MBD3L2Q8NHZ7 208 aaPredicted RBP5.53□□□□□ -1.52
PCDH15-204ENST00000373956 RHPN1-AS1Q9BWJ2 59 aa5.53□□□□□ -1.52
PCDH15-204ENST00000373956 MPV17L2Q567V2 206 aa5.53□□□□□ -1.52
PCDH15-204ENST00000373956 Q71RC1 249 aaPredicted RBP5.53□□□□□ -1.52
PCDH15-204ENST00000373956 PINLYPA6NC86 204 aa5.53□□□□□ -1.52
PCDH15-204ENST00000373956 CRYGCP07315 174 aa5.53□□□□□ -1.52
PCDH15-204ENST00000373956 COL11A1P12107 1806 aaPredicted RBP5.53□□□□□ -1.52
PCDH15-204ENST00000373956 IGKV1OR2-108A0A075B7D4 117 aa5.53□□□□□ -1.52
PCDH15-204ENST00000373956 IGKV1-5P01602 117 aa5.53□□□□□ -1.52
PCDH15-204ENST00000373956 RNASE2P10153 161 aaKnown RBP5.53□□□□□ -1.52
PCDH15-204ENST00000373956 SVIPQ8NHG7 77 aa5.53□□□□□ -1.52
PCDH15-204ENST00000373956 USMG5Q96IX5 58 aa5.53□□□□□ -1.52
PCDH15-204ENST00000373956 IGF2BP2-AS1Q96M15 143 aa5.53□□□□□ -1.52
PCDH15-204ENST00000373956 ZMAT4Q9H898 229 aa5.53□□□□□ -1.52
PCDH15-204ENST00000373956 A0A1B0GWJ7 208 aa5.52□□□□□ -1.53
PCDH15-204ENST00000373956 BUB1B-PAK6H3BSN5 160 aa5.52□□□□□ -1.53
PCDH15-204ENST00000373956 NEGR1Q7Z3B1 354 aa5.52□□□□□ -1.53
PCDH15-204ENST00000373956 TRBV20-1A0A075B6N2 111 aa5.52□□□□□ -1.53
PCDH15-204ENST00000373956 SPACA3Q8IXA5 215 aa5.52□□□□□ -1.53
PCDH15-204ENST00000373956 FGFBP3Q8TAT2 258 aa5.52□□□□□ -1.53
PCDH15-204ENST00000373956 LIME1Q9H400 295 aa5.52□□□□□ -1.53
PCDH15-204ENST00000373956 SCN4AP35499 1836 aa5.52□□□□□ -1.53
PCDH15-204ENST00000373956 IGKV2D-24A0A075B6R9 120 aa5.52□□□□□ -1.53
PCDH15-204ENST00000373956 H0YJW9 148 aa5.52□□□□□ -1.53
PCDH15-204ENST00000373956 MINOS1Q5TGZ0 78 aa5.52□□□□□ -1.53
PCDH15-204ENST00000373956 WBP1Q96G27 269 aa5.52□□□□□ -1.53
PCDH15-204ENST00000373956 MINOS1-NBL1R4GNA1 71 aa5.52□□□□□ -1.53
PCDH15-204ENST00000373956 ANKRD36A6QL64 1941 aa5.52□□□□□ -1.53
PCDH15-204ENST00000373956 B4DSR2 109 aa5.52□□□□□ -1.53
PCDH15-204ENST00000373956 STPG4Q8N801 248 aa5.52□□□□□ -1.53
PCDH15-204ENST00000373956 TMEM243Q9BU79 118 aa5.52□□□□□ -1.53
PCDH15-204ENST00000373956 PDCD11Q14690 1871 aaKnown RBP5.52□□□□□ -1.53
PCDH15-204ENST00000373956 WISP3O95389 354 aaPredicted RBP5.52□□□□□ -1.53
PCDH15-204ENST00000373956 SLC25A16P16260 332 aa5.52□□□□□ -1.53
PCDH15-204ENST00000373956 HGFACQ04756 655 aa5.52□□□□□ -1.53
PCDH15-204ENST00000373956 SPINK13Q1W4C9 94 aa5.52□□□□□ -1.53
PCDH15-204ENST00000373956 TRAV12-2A0A075B6T6 113 aa5.51□□□□□ -1.53
PCDH15-204ENST00000373956 DLEU1O43261 78 aa5.51□□□□□ -1.53
PCDH15-204ENST00000373956 CARD19Q96LW7 228 aa5.51□□□□□ -1.53
PCDH15-204ENST00000373956 MRPS18CQ9Y3D5 142 aaKnown RBP5.51□□□□□ -1.53
PCDH15-204ENST00000373956 FOXF2Q12947 444 aa5.51□□□□□ -1.53
PCDH15-204ENST00000373956 UBE2V1Q13404 147 aa5.51□□□□□ -1.53
PCDH15-204ENST00000373956 RNASE13Q5GAN3 156 aaKnown RBP5.51□□□□□ -1.53
PCDH15-204ENST00000373956 CTHRC1Q96CG8 243 aa5.51□□□□□ -1.53
PCDH15-204ENST00000373956 TSSC4Q9Y5U2 329 aaPredicted RBP5.51□□□□□ -1.53
PCDH15-204ENST00000373956 TMEM178BH3BS89 294 aa5.51□□□□□ -1.53
PCDH15-204ENST00000373956 IGKV1-39P01597 117 aa5.51□□□□□ -1.53
PCDH15-204ENST00000373956 IGKV1D-39P04432 117 aa5.51□□□□□ -1.53
PCDH15-204ENST00000373956 C3orf79P0CE67 100 aa5.51□□□□□ -1.53
PCDH15-204ENST00000373956 CD177Q8N6Q3 437 aa5.51□□□□□ -1.53
PCDH15-204ENST00000373956 FAM231BA6NCW3 169 aa5.51□□□□□ -1.53
PCDH15-204ENST00000373956 E9PLN8 166 aa5.51□□□□□ -1.53
PCDH15-204ENST00000373956 IFI6P09912 130 aa5.51□□□□□ -1.53
PCDH15-204ENST00000373956 SEC61GP60059 68 aa5.51□□□□□ -1.53
PCDH15-204ENST00000373956 Q0VFX4 171 aa5.51□□□□□ -1.53
PCDH15-204ENST00000373956 C1orf194Q5T5A4 169 aa5.51□□□□□ -1.53
PCDH15-204ENST00000373956 Q86TA4 180 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms