RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 TRIOBPQ9H2D6 2365 aa8.13□□□□□ -1.11
TRERF1-204ENST00000372922 TRGV1A0A0A0MS02 117 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 A0A1B0GWJ7 208 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 BRD3OSQ6XYD6 125 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 SLC25A39Q9BZJ4 359 aaPredicted RBP8.12□□□□□ -1.11
TRERF1-204ENST00000372922 MS4A6AQ9H2W1 248 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 RPL15P61313 204 aaKnown RBP8.12□□□□□ -1.11
TRERF1-204ENST00000372922 TRGV9Q99603 122 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 NPIPB5A8MRT5 1133 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 BUB1B-PAK6H3BSN5 160 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 C5orf64Q2M2E5 130 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 LINC00477Q96M19 166 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 FCN3O75636 299 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 INSP01308 110 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 LAGE3Q14657 143 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 MPV17L2Q567V2 206 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 ACTL10Q5JWF8 245 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 C9orf139Q6ZV77 190 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 ATP5L2Q7Z4Y8 100 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 CHCHD1Q96BP2 118 aaKnown RBP8.12□□□□□ -1.11
TRERF1-204ENST00000372922 LAMTOR3Q9UHA4 124 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 U3KQE9 123 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 IGKV2-40A0A087WW87 121 aaPredicted RBP8.12□□□□□ -1.11
TRERF1-204ENST00000372922 RNF222A6NCQ9 220 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 IGKV2D-40P01614 121 aaPredicted RBP8.12□□□□□ -1.11
TRERF1-204ENST00000372922 IGKCP01834 107 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 KLF17Q5JT82 389 aaPredicted RBP8.12□□□□□ -1.11
TRERF1-204ENST00000372922 SP5Q6BEB4 398 aaPredicted RBP8.12□□□□□ -1.11
TRERF1-204ENST00000372922 TSKUQ8WUA8 353 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 RNF126Q9BV68 326 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 ZNF319Q9P2F9 582 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 GATA3P23771 443 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 MPZP25189 248 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 ID3Q02535 119 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 LINC01559Q495D7 138 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 PRR31Q5SQ13 230 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 HAPLN4Q86UW8 402 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 BCL6BQ8N143 479 aaPredicted RBP8.12□□□□□ -1.11
TRERF1-204ENST00000372922 HIST3H2BBQ8N257 126 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 JPT2Q9H910 190 aa8.12□□□□□ -1.11
TRERF1-204ENST00000372922 KIF26BQ2KJY2 2108 aa8.11□□□□□ -1.11
TRERF1-204ENST00000372922 PMS2P5A8MQ11 134 aa8.11□□□□□ -1.11
TRERF1-204ENST00000372922 C17orf82Q86X59 251 aaPredicted RBP8.11□□□□□ -1.11
TRERF1-204ENST00000372922 NABP1Q96AH0 204 aa8.11□□□□□ -1.11
TRERF1-204ENST00000372922 GNB1LQ9BYB4 327 aa8.11□□□□□ -1.11
TRERF1-204ENST00000372922 WDR83OSQ9Y284 106 aa8.11□□□□□ -1.11
TRERF1-204ENST00000372922 A0A0A6YYD4 124 aa8.11□□□□□ -1.11
TRERF1-204ENST00000372922 TOMM40O96008 361 aa8.11□□□□□ -1.11
TRERF1-204ENST00000372922 ZNF138P52744 262 aa8.11□□□□□ -1.11
TRERF1-204ENST00000372922 Q0VFX4 171 aa8.11□□□□□ -1.11
TRERF1-204ENST00000372922 Q6ZS92 163 aa8.11□□□□□ -1.11
TRERF1-204ENST00000372922 TMEM238C9JI98 176 aa8.11□□□□□ -1.11
TRERF1-204ENST00000372922 CD177Q8N6Q3 437 aa8.11□□□□□ -1.11
TRERF1-204ENST00000372922 GAGE12HA6NDE8 117 aa8.11□□□□□ -1.11
TRERF1-204ENST00000372922 CRIPAKQ8N1N5 446 aa8.11□□□□□ -1.11
TRERF1-204ENST00000372922 PAQR4Q8N4S7 273 aaPredicted RBP8.11□□□□□ -1.11
TRERF1-204ENST00000372922 TMEM170AQ8WVE7 144 aa8.11□□□□□ -1.11
TRERF1-204ENST00000372922 INTS1Q8N201 2190 aaKnown RBP8.1□□□□□ -1.11
TRERF1-204ENST00000372922 FOXG1P55316 489 aaPredicted RBP8.1□□□□□ -1.11
TRERF1-204ENST00000372922 GAFA1Q96PS6 74 aa8.1□□□□□ -1.11
TRERF1-204ENST00000372922 H0YJW9 148 aa8.1□□□□□ -1.11
TRERF1-204ENST00000372922 AMBPP02760 352 aa8.1□□□□□ -1.11
TRERF1-204ENST00000372922 ZNF664Q8N3J9 261 aa8.1□□□□□ -1.11
TRERF1-204ENST00000372922 SPANXA1Q9NS26 97 aa8.1□□□□□ -1.11
TRERF1-204ENST00000372922 FAM231BA6NCW3 169 aa8.1□□□□□ -1.11
TRERF1-204ENST00000372922 SRRM4A7MD48 611 aaKnown RBP8.1□□□□□ -1.11
TRERF1-204ENST00000372922 C1orf194Q5T5A4 169 aa8.1□□□□□ -1.11
TRERF1-204ENST00000372922 TREML4Q6UXN2 200 aa8.1□□□□□ -1.11
TRERF1-204ENST00000372922 IGHV3-73A0A0B4J1V6 119 aa8.1□□□□□ -1.11
TRERF1-204ENST00000372922 SELLP14151 372 aa8.1□□□□□ -1.11
TRERF1-204ENST00000372922 ZNF876PQ49A33 203 aa8.1□□□□□ -1.11
TRERF1-204ENST00000372922 OCC1Q8TAD7 63 aa8.1□□□□□ -1.11
TRERF1-204ENST00000372922 EFNA2O43921 213 aa8.1□□□□□ -1.11
TRERF1-204ENST00000372922 NAPSAO96009 420 aa8.1□□□□□ -1.11
TRERF1-204ENST00000372922 BAALCQ8WXS3 180 aa8.1□□□□□ -1.11
TRERF1-204ENST00000372922 SMPXQ9UHP9 88 aa8.1□□□□□ -1.11
TRERF1-204ENST00000372922 IGKV1-12A0A0C4DH73 117 aa8.09□□□□□ -1.11
TRERF1-204ENST00000372922 A8MXK9 166 aa8.09□□□□□ -1.11
TRERF1-204ENST00000372922 H3BMM0 161 aa8.09□□□□□ -1.11
TRERF1-204ENST00000372922 J3QRE1 110 aa8.09□□□□□ -1.11
TRERF1-204ENST00000372922 IGKV1D-12P01611 117 aa8.09□□□□□ -1.11
TRERF1-204ENST00000372922 UBE2WQ96B02 151 aa8.09□□□□□ -1.11
TRERF1-204ENST00000372922 SIPA1L1O43166 1804 aa8.09□□□□□ -1.11
TRERF1-204ENST00000372922 C10orf55Q5SWW7 151 aa8.09□□□□□ -1.11
TRERF1-204ENST00000372922 DEFB104AQ8WTQ1 72 aa8.09□□□□□ -1.11
TRERF1-204ENST00000372922 FXYD7P58549 80 aa8.09□□□□□ -1.11
TRERF1-204ENST00000372922 RASL10AQ92737 203 aa8.09□□□□□ -1.11
TRERF1-204ENST00000372922 BPESC1Q9GZL8 116 aa8.09□□□□□ -1.11
TRERF1-204ENST00000372922 IGHG3P01860 377 aa8.09□□□□□ -1.11
TRERF1-204ENST00000372922 MESP1Q9BRJ9 268 aa8.09□□□□□ -1.11
TRERF1-204ENST00000372922 ERCC8Q13216 396 aa8.09□□□□□ -1.11
TRERF1-204ENST00000372922 BMPERQ8N8U9 685 aa8.09□□□□□ -1.11
TRERF1-204ENST00000372922 TRAV12-1A0A0B4J245 112 aa8.08□□□□□ -1.12
TRERF1-204ENST00000372922 NDPQ00604 133 aa8.08□□□□□ -1.12
TRERF1-204ENST00000372922 FOXL1Q12952 345 aa8.08□□□□□ -1.12
TRERF1-204ENST00000372922 TEX43Q6ZNM6 134 aa8.08□□□□□ -1.12
TRERF1-204ENST00000372922 IFI27L1Q96BM0 104 aa8.08□□□□□ -1.12
TRERF1-204ENST00000372922 COL8A2P25067 703 aa8.08□□□□□ -1.12
TRERF1-204ENST00000372922 HERV-K104P63124 156 aa8.08□□□□□ -1.12
TRERF1-204ENST00000372922 EXOC3-AS1Q8N2X6 119 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms