RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 CSTL1Q9H114 145 aa18.06■□□□□ 0.48
TM9SF3-201ENST00000371142 TRIOBPQ9H2D6 2365 aa18.06■□□□□ 0.48
TM9SF3-201ENST00000371142 MS4A6AQ9H2W1 248 aa18.05■□□□□ 0.48
TM9SF3-201ENST00000371142 SMKR1H3BMG3 65 aa18.05■□□□□ 0.48
TM9SF3-201ENST00000371142 MLANAQ16655 118 aa18.05■□□□□ 0.48
TM9SF3-201ENST00000371142 GAGE13Q4V321 117 aa18.05■□□□□ 0.48
TM9SF3-201ENST00000371142 KIF26BQ2KJY2 2108 aa18.05■□□□□ 0.48
TM9SF3-201ENST00000371142 TRAV1-1A0A0B4J248 108 aa18.05■□□□□ 0.48
TM9SF3-201ENST00000371142 SDK2Q58EX2 2172 aa18.04■□□□□ 0.48
TM9SF3-201ENST00000371142 SRSF4Q08170 494 aaKnown RBP18.04■□□□□ 0.48
TM9SF3-201ENST00000371142 ERCC8Q13216 396 aa18.04■□□□□ 0.48
TM9SF3-201ENST00000371142 LINC00477Q96M19 166 aa18.04■□□□□ 0.48
TM9SF3-201ENST00000371142 A0A087WWL8 130 aa18.04■□□□□ 0.48
TM9SF3-201ENST00000371142 B3GALT5-AS1P59052 145 aa18.04■□□□□ 0.48
TM9SF3-201ENST00000371142 GUSBP1Q15486 140 aa18.04■□□□□ 0.48
TM9SF3-201ENST00000371142 ANAPC13Q9BS18 74 aa18.04■□□□□ 0.48
TM9SF3-201ENST00000371142 TMEM155Q4W5P6 130 aa18.04■□□□□ 0.48
TM9SF3-201ENST00000371142 BPESC1Q9GZL8 116 aa18.04■□□□□ 0.48
TM9SF3-201ENST00000371142 Q5PR19 223 aa18.04■□□□□ 0.48
TM9SF3-201ENST00000371142 SCN5AQ14524 2016 aa18.03■□□□□ 0.48
TM9SF3-201ENST00000371142 TNFSF13O75888 250 aa18.03■□□□□ 0.48
TM9SF3-201ENST00000371142 TOMM40O96008 361 aa18.03■□□□□ 0.48
TM9SF3-201ENST00000371142 C1orf159Q96HA4 380 aa18.03■□□□□ 0.48
TM9SF3-201ENST00000371142 RTTNQ86VV8 2226 aa18.03■□□□□ 0.48
TM9SF3-201ENST00000371142 MBD3L4A6NDZ8 208 aaPredicted RBP18.03■□□□□ 0.48
TM9SF3-201ENST00000371142 MBD3L3A6NE82 208 aaPredicted RBP18.03■□□□□ 0.48
TM9SF3-201ENST00000371142 MBD3L5A6NJ08 208 aaPredicted RBP18.03■□□□□ 0.48
TM9SF3-201ENST00000371142 SEC11AP67812 179 aa18.03■□□□□ 0.48
TM9SF3-201ENST00000371142 TMEM256Q8N2U0 113 aa18.03■□□□□ 0.48
TM9SF3-201ENST00000371142 MBD3L2Q8NHZ7 208 aaPredicted RBP18.03■□□□□ 0.48
TM9SF3-201ENST00000371142 THADAQ6YHU6 1953 aa18.03■□□□□ 0.48
TM9SF3-201ENST00000371142 BCL6BQ8N143 479 aaPredicted RBP18.03■□□□□ 0.48
TM9SF3-201ENST00000371142 RHPN1-AS1Q9BWJ2 59 aa18.02■□□□□ 0.48
TM9SF3-201ENST00000371142 LINC01549A6NIU2 74 aa18.02■□□□□ 0.48
TM9SF3-201ENST00000371142 A0A0G2JRQ6 117 aa18.02■□□□□ 0.47
TM9SF3-201ENST00000371142 A0A1B0GW64 132 aa18.02■□□□□ 0.47
TM9SF3-201ENST00000371142 C15orf62A8K5M9 175 aa18.02■□□□□ 0.47
TM9SF3-201ENST00000371142 VCYO14598 125 aa18.02■□□□□ 0.47
TM9SF3-201ENST00000371142 ZNRD1Q9P1U0 126 aa18.02■□□□□ 0.47
TM9SF3-201ENST00000371142 FAM223BA6NKX1 122 aa18.01■□□□□ 0.47
TM9SF3-201ENST00000371142 FAM223AQ8IWN6 122 aa18.01■□□□□ 0.47
TM9SF3-201ENST00000371142 PLEKHB2Q96CS7 222 aa18.01■□□□□ 0.47
TM9SF3-201ENST00000371142 USMG5Q96IX5 58 aa18.01■□□□□ 0.47
TM9SF3-201ENST00000371142 SAA4P35542 130 aa18.01■□□□□ 0.47
TM9SF3-201ENST00000371142 QRFPP83859 136 aa18.01■□□□□ 0.47
TM9SF3-201ENST00000371142 TMEM158Q8WZ71 300 aa18.01■□□□□ 0.47
TM9SF3-201ENST00000371142 RASL10AQ92737 203 aa18.01■□□□□ 0.47
TM9SF3-201ENST00000371142 INSP01308 110 aa18.01■□□□□ 0.47
TM9SF3-201ENST00000371142 PRTN3P24158 256 aa18.01■□□□□ 0.47
TM9SF3-201ENST00000371142 RUSC1-AS1Q66K80 236 aa18.01■□□□□ 0.47
TM9SF3-201ENST00000371142 UNQ6494/PRO21346Q6UXR6 183 aa18.01■□□□□ 0.47
TM9SF3-201ENST00000371142 RASL11AQ6T310 242 aa18.01■□□□□ 0.47
TM9SF3-201ENST00000371142 XIRP1Q702N8 1843 aaKnown RBP18.01■□□□□ 0.47
TM9SF3-201ENST00000371142 PSCAO43653 123 aa18■□□□□ 0.47
TM9SF3-201ENST00000371142 IGKV1-16P04430 117 aa18■□□□□ 0.47
TM9SF3-201ENST00000371142 LAMTOR3Q9UHA4 124 aa18■□□□□ 0.47
TM9SF3-201ENST00000371142 DOCK6Q96HP0 2047 aa18■□□□□ 0.47
TM9SF3-201ENST00000371142 TRBV6-6A0A0A6YYG2 114 aa18■□□□□ 0.47
TM9SF3-201ENST00000371142 FREM3P0C091 2139 aa18■□□□□ 0.47
TM9SF3-201ENST00000371142 A0A087X0K7 114 aa18■□□□□ 0.47
TM9SF3-201ENST00000371142 TRAV16A0A0A6YYK6 109 aaPredicted RBP18■□□□□ 0.47
TM9SF3-201ENST00000371142 TRAV13-1A0A0B4J241 112 aa18■□□□□ 0.47
TM9SF3-201ENST00000371142 SIGMAR1Q99720 223 aa18■□□□□ 0.47
TM9SF3-201ENST00000371142 RNASE2P10153 161 aaKnown RBP17.99■□□□□ 0.47
TM9SF3-201ENST00000371142 RPRMLQ8N4K4 120 aa17.99■□□□□ 0.47
TM9SF3-201ENST00000371142 MCRIP2Q9BUT9 160 aaKnown RBP17.99■□□□□ 0.47
TM9SF3-201ENST00000371142 SYNJ2BPP57105 145 aa17.99■□□□□ 0.47
TM9SF3-201ENST00000371142 C6orf226Q5I0X4 101 aa17.99■□□□□ 0.47
TM9SF3-201ENST00000371142 AMN1Q8IY45 258 aa17.99■□□□□ 0.47
TM9SF3-201ENST00000371142 LINC01356Q8N9X3 169 aa17.98■□□□□ 0.47
TM9SF3-201ENST00000371142 OVOL3O00110 214 aa17.98■□□□□ 0.47
TM9SF3-201ENST00000371142 E7EQL1 145 aa17.98■□□□□ 0.47
TM9SF3-201ENST00000371142 HIST1H4AP62805 103 aaKnown RBP17.98■□□□□ 0.47
TM9SF3-201ENST00000371142 FAM90A2PQ658T7 463 aa17.98■□□□□ 0.47
TM9SF3-201ENST00000371142 DTX1Q86Y01 620 aa17.98■□□□□ 0.47
TM9SF3-201ENST00000371142 LINC01559Q495D7 138 aa17.97■□□□□ 0.47
TM9SF3-201ENST00000371142 DEFB130BP0DP73 79 aa17.97■□□□□ 0.47
TM9SF3-201ENST00000371142 DEFB130AP0DP74 79 aa17.97■□□□□ 0.47
TM9SF3-201ENST00000371142 LINC00479Q96M42 142 aa17.96■□□□□ 0.47
TM9SF3-201ENST00000371142 SSC4DQ8WTU2 575 aa17.96■□□□□ 0.47
TM9SF3-201ENST00000371142 C3orf79P0CE67 100 aa17.96■□□□□ 0.47
TM9SF3-201ENST00000371142 Q6ZRM9 215 aa17.96■□□□□ 0.47
TM9SF3-201ENST00000371142 SPOCK3Q9BQ16 436 aa17.96■□□□□ 0.47
TM9SF3-201ENST00000371142 TMEM190Q8WZ59 177 aa17.95■□□□□ 0.46
TM9SF3-201ENST00000371142 MPDZO75970 2070 aa17.95■□□□□ 0.46
TM9SF3-201ENST00000371142 PRR30Q53SZ7 412 aaPredicted RBP17.95■□□□□ 0.46
TM9SF3-201ENST00000371142 Q6ZS92 163 aa17.95■□□□□ 0.46
TM9SF3-201ENST00000371142 MAPK1IP1LQ8NDC0 245 aa17.95■□□□□ 0.46
TM9SF3-201ENST00000371142 INS-IGF2F8WCM5 200 aa17.95■□□□□ 0.46
TM9SF3-201ENST00000371142 IGHG3P01860 377 aa17.95■□□□□ 0.46
TM9SF3-201ENST00000371142 HS3ST6Q96QI5 342 aa17.95■□□□□ 0.46
TM9SF3-201ENST00000371142 SPXQ9BT56 116 aa17.95■□□□□ 0.46
TM9SF3-201ENST00000371142 MSRB2Q9Y3D2 182 aa17.95■□□□□ 0.46
TM9SF3-201ENST00000371142 Q86TA4 180 aa17.95■□□□□ 0.46
TM9SF3-201ENST00000371142 LYPD1Q8N2G4 141 aa17.95■□□□□ 0.46
TM9SF3-201ENST00000371142 RNF223E7ERA6 249 aa17.94■□□□□ 0.46
TM9SF3-201ENST00000371142 ZDBF2Q9HCK1 2354 aa17.94■□□□□ 0.46
TM9SF3-201ENST00000371142 CDK2AP2O75956 126 aa17.94■□□□□ 0.46
TM9SF3-201ENST00000371142 REG4Q9BYZ8 158 aa17.94■□□□□ 0.46
TM9SF3-201ENST00000371142 DAZ1Q9NQZ3 744 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms