RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 A0A1W2PPI3 338 aa13.41□□□□□ -0.26
SCAF8-201ENST00000367178 RNF223E7ERA6 249 aa13.41□□□□□ -0.26
SCAF8-201ENST00000367178 MRPS16Q9Y3D3 137 aaKnown RBP13.41□□□□□ -0.26
SCAF8-201ENST00000367178 TRBV24-1A0A075B6N3 115 aa13.4□□□□□ -0.26
SCAF8-201ENST00000367178 E9PQ18 207 aa13.4□□□□□ -0.26
SCAF8-201ENST00000367178 HIST1H2BKO60814 126 aa13.4□□□□□ -0.26
SCAF8-201ENST00000367178 HIST1H2BJP06899 126 aa13.4□□□□□ -0.26
SCAF8-201ENST00000367178 LINC00614P0C842 121 aa13.4□□□□□ -0.26
SCAF8-201ENST00000367178 HIST1H2BOP23527 126 aa13.4□□□□□ -0.26
SCAF8-201ENST00000367178 HIST1H2BBP33778 126 aa13.4□□□□□ -0.26
SCAF8-201ENST00000367178 HIST1H2BDP58876 126 aa13.4□□□□□ -0.26
SCAF8-201ENST00000367178 HIST1H2BCP62807 126 aa13.4□□□□□ -0.26
SCAF8-201ENST00000367178 HIST2H2BEQ16778 126 aa13.4□□□□□ -0.26
SCAF8-201ENST00000367178 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.4□□□□□ -0.26
SCAF8-201ENST00000367178 HIST1H2BHQ93079 126 aa13.4□□□□□ -0.26
SCAF8-201ENST00000367178 HIST1H2BNQ99877 126 aa13.4□□□□□ -0.26
SCAF8-201ENST00000367178 HIST1H2BMQ99879 126 aa13.4□□□□□ -0.26
SCAF8-201ENST00000367178 BEX4Q9NWD9 120 aaPredicted RBP13.4□□□□□ -0.26
SCAF8-201ENST00000367178 YLPM1P49750 1951 aaKnown RBP13.4□□□□□ -0.26
SCAF8-201ENST00000367178 KIAA1671Q9BY89 1806 aa13.4□□□□□ -0.26
SCAF8-201ENST00000367178 HBDP02042 147 aa13.4□□□□□ -0.26
SCAF8-201ENST00000367178 GZMBP10144 247 aa13.4□□□□□ -0.26
SCAF8-201ENST00000367178 IFI27P40305 119 aaPredicted RBP13.4□□□□□ -0.26
SCAF8-201ENST00000367178 UBE2E1P51965 193 aa13.4□□□□□ -0.26
SCAF8-201ENST00000367178 SPG11Q96JI7 2443 aa13.4□□□□□ -0.26
SCAF8-201ENST00000367178 LYL1P12980 280 aa13.4□□□□□ -0.26
SCAF8-201ENST00000367178 ERVK11-1P61568 191 aa13.4□□□□□ -0.26
SCAF8-201ENST00000367178 ZNF562Q6V9R5 426 aa13.4□□□□□ -0.26
SCAF8-201ENST00000367178 ATP5L2Q7Z4Y8 100 aa13.4□□□□□ -0.26
SCAF8-201ENST00000367178 SRSF8Q9BRL6 282 aaKnown RBP13.4□□□□□ -0.26
SCAF8-201ENST00000367178 VCX2Q9H322 139 aa13.4□□□□□ -0.26
SCAF8-201ENST00000367178 TRGV4A0A0C4DH28 118 aa13.4□□□□□ -0.27
SCAF8-201ENST00000367178 ZNF138P52744 262 aa13.4□□□□□ -0.27
SCAF8-201ENST00000367178 RNASE1P07998 156 aaKnown RBP13.39□□□□□ -0.27
SCAF8-201ENST00000367178 SRSF1Q07955 248 aaKnown RBP eCLIP13.39□□□□□ -0.27
SCAF8-201ENST00000367178 NDUFA3O95167 84 aa13.39□□□□□ -0.27
SCAF8-201ENST00000367178 ZNF124Q15973 351 aa13.39□□□□□ -0.27
SCAF8-201ENST00000367178 ARFGEF3Q5TH69 2177 aa13.39□□□□□ -0.27
SCAF8-201ENST00000367178 NCOR1P1Q9H4R4 102 aa13.39□□□□□ -0.27
SCAF8-201ENST00000367178 CYSLTR1Q9Y271 337 aa13.39□□□□□ -0.27
SCAF8-201ENST00000367178 FNDC10F2Z333 226 aa13.39□□□□□ -0.27
SCAF8-201ENST00000367178 CMC4P56277 68 aaPredicted RBP13.39□□□□□ -0.27
SCAF8-201ENST00000367178 IGLV3-9A0A075B6K5 115 aa13.38□□□□□ -0.27
SCAF8-201ENST00000367178 FAM223BA6NKX1 122 aa13.38□□□□□ -0.27
SCAF8-201ENST00000367178 SRRM4A7MD48 611 aaKnown RBP13.38□□□□□ -0.27
SCAF8-201ENST00000367178 GATA3P23771 443 aa13.38□□□□□ -0.27
SCAF8-201ENST00000367178 DUX4L9Q6RFH8 374 aaPredicted RBP13.38□□□□□ -0.27
SCAF8-201ENST00000367178 FAM223AQ8IWN6 122 aa13.38□□□□□ -0.27
SCAF8-201ENST00000367178 JKAMPQ9P055 326 aa13.38□□□□□ -0.27
SCAF8-201ENST00000367178 TOMM40O96008 361 aa13.38□□□□□ -0.27
SCAF8-201ENST00000367178 LOXP28300 417 aaPredicted RBP13.38□□□□□ -0.27
SCAF8-201ENST00000367178 RUSC1-AS1Q66K80 236 aa13.38□□□□□ -0.27
SCAF8-201ENST00000367178 SMIM13P0DJ93 91 aa13.38□□□□□ -0.27
SCAF8-201ENST00000367178 EVI2AP22794 236 aa13.38□□□□□ -0.27
SCAF8-201ENST00000367178 FRMPD3Q5JV73 1810 aa13.38□□□□□ -0.27
SCAF8-201ENST00000367178 CACNA1AO00555 2505 aa13.37□□□□□ -0.27
SCAF8-201ENST00000367178 ORMDL2Q53FV1 153 aa13.37□□□□□ -0.27
SCAF8-201ENST00000367178 GFI1BQ5VTD9 330 aa13.37□□□□□ -0.27
SCAF8-201ENST00000367178 KLHL30-AS1Q8NEE0 82 aa13.37□□□□□ -0.27
SCAF8-201ENST00000367178 NDUFAF3Q9BU61 184 aa13.37□□□□□ -0.27
SCAF8-201ENST00000367178 ANAPC10Q9UM13 185 aa13.37□□□□□ -0.27
SCAF8-201ENST00000367178 WT1P19544 449 aaPredicted RBP13.37□□□□□ -0.27
SCAF8-201ENST00000367178 Q8TAT8 98 aa13.37□□□□□ -0.27
SCAF8-201ENST00000367178 CUL9Q8IWT3 2517 aa13.37□□□□□ -0.27
SCAF8-201ENST00000367178 FOXL1Q12952 345 aa13.37□□□□□ -0.27
SCAF8-201ENST00000367178 CFHR2P36980 270 aa13.37□□□□□ -0.27
SCAF8-201ENST00000367178 LCNL1Q6ZST4 164 aa13.37□□□□□ -0.27
SCAF8-201ENST00000367178 RHPN1-AS1Q9BWJ2 59 aa13.37□□□□□ -0.27
SCAF8-201ENST00000367178 FCN3O75636 299 aa13.36□□□□□ -0.27
SCAF8-201ENST00000367178 LCN12Q6JVE5 192 aa13.36□□□□□ -0.27
SCAF8-201ENST00000367178 LYPD1Q8N2G4 141 aa13.36□□□□□ -0.27
SCAF8-201ENST00000367178 TRAV8-1A0A0A6YYK1 113 aa13.36□□□□□ -0.27
SCAF8-201ENST00000367178 DNAL4O96015 105 aa13.36□□□□□ -0.27
SCAF8-201ENST00000367178 CXCL1P09341 107 aa13.36□□□□□ -0.27
SCAF8-201ENST00000367178 TDGF1P13385 188 aa13.36□□□□□ -0.27
SCAF8-201ENST00000367178 Q5PR19 223 aa13.36□□□□□ -0.27
SCAF8-201ENST00000367178 MAPK1IP1LQ8NDC0 245 aa13.36□□□□□ -0.27
SCAF8-201ENST00000367178 OVOL3O00110 214 aa13.36□□□□□ -0.27
SCAF8-201ENST00000367178 PEF1Q9UBV8 284 aaKnown RBP13.36□□□□□ -0.27
SCAF8-201ENST00000367178 C17orf58Q2M2W7 97 aa13.35□□□□□ -0.27
SCAF8-201ENST00000367178 IGFL4Q6B9Z1 124 aa13.35□□□□□ -0.27
SCAF8-201ENST00000367178 TMEM14BQ9NUH8 114 aa13.35□□□□□ -0.27
SCAF8-201ENST00000367178 LINC00477Q96M19 166 aa13.35□□□□□ -0.27
SCAF8-201ENST00000367178 IGHV1-69DA0A0B4J2H0 117 aa13.35□□□□□ -0.27
SCAF8-201ENST00000367178 IGHV1-69P01742 117 aa13.35□□□□□ -0.27
SCAF8-201ENST00000367178 TEX36Q5VZQ5 186 aa13.35□□□□□ -0.27
SCAF8-201ENST00000367178 NIT1Q86X76 327 aa13.35□□□□□ -0.27
SCAF8-201ENST00000367178 MRPL16Q9NX20 251 aaKnown RBP13.35□□□□□ -0.27
SCAF8-201ENST00000367178 ATP6V0E1O15342 81 aa13.34□□□□□ -0.27
SCAF8-201ENST00000367178 COLCA2A8K830 154 aa13.34□□□□□ -0.27
SCAF8-201ENST00000367178 TCF15Q12870 199 aa13.34□□□□□ -0.27
SCAF8-201ENST00000367178 LYZL1Q6UWQ5 148 aa13.34□□□□□ -0.27
SCAF8-201ENST00000367178 DAZ1Q9NQZ3 744 aaKnown RBP13.34□□□□□ -0.27
SCAF8-201ENST00000367178 LY96Q9Y6Y9 160 aa13.34□□□□□ -0.27
SCAF8-201ENST00000367178 IGHV2-70DA0A0C4DH43 119 aa13.34□□□□□ -0.27
SCAF8-201ENST00000367178 CNTFRP26992 372 aa13.34□□□□□ -0.27
SCAF8-201ENST00000367178 PSG3Q16557 428 aa13.34□□□□□ -0.27
SCAF8-201ENST00000367178 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.34□□□□□ -0.27
SCAF8-201ENST00000367178 ACTL10Q5JWF8 245 aa13.34□□□□□ -0.27
SCAF8-201ENST00000367178 LIME1Q9H400 295 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms