RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 LCN12Q6JVE5 192 aa17.09■□□□□ 0.33
SMURF1-201ENST00000361125 SRRM4A7MD48 611 aaKnown RBP17.09■□□□□ 0.33
SMURF1-201ENST00000361125 D6R8Y8 96 aa17.09■□□□□ 0.33
SMURF1-201ENST00000361125 TOMM40O96008 361 aa17.09■□□□□ 0.33
SMURF1-201ENST00000361125 PPBPP02775 128 aa17.08■□□□□ 0.33
SMURF1-201ENST00000361125 ORMDL2Q53FV1 153 aa17.08■□□□□ 0.33
SMURF1-201ENST00000361125 LIME1Q9H400 295 aa17.08■□□□□ 0.33
SMURF1-201ENST00000361125 SFTA2Q6UW10 78 aa17.08■□□□□ 0.33
SMURF1-201ENST00000361125 SLX1AQ9BQ83 275 aa17.08■□□□□ 0.33
SMURF1-201ENST00000361125 SPCS1Q9Y6A9 102 aa17.08■□□□□ 0.33
SMURF1-201ENST00000361125 PLXND1Q9Y4D7 1925 aa17.08■□□□□ 0.33
SMURF1-201ENST00000361125 TRAV8-1A0A0A6YYK1 113 aa17.08■□□□□ 0.32
SMURF1-201ENST00000361125 SLC25A16P16260 332 aa17.08■□□□□ 0.32
SMURF1-201ENST00000361125 ZNF138P52744 262 aa17.08■□□□□ 0.32
SMURF1-201ENST00000361125 RIPPLY3P57055 190 aa17.08■□□□□ 0.32
SMURF1-201ENST00000361125 PSG3Q16557 428 aa17.08■□□□□ 0.32
SMURF1-201ENST00000361125 TANC1Q9C0D5 1861 aa17.07■□□□□ 0.32
SMURF1-201ENST00000361125 CHCHD5Q9BSY4 110 aa17.07■□□□□ 0.32
SMURF1-201ENST00000361125 FAM223BA6NKX1 122 aa17.07■□□□□ 0.32
SMURF1-201ENST00000361125 FAM223AQ8IWN6 122 aa17.07■□□□□ 0.32
SMURF1-201ENST00000361125 WDR86Q86TI4 376 aa17.07■□□□□ 0.32
SMURF1-201ENST00000361125 IGHV3-53P01767 116 aa17.07■□□□□ 0.32
SMURF1-201ENST00000361125 PRTN3P24158 256 aa17.07■□□□□ 0.32
SMURF1-201ENST00000361125 ZNF664Q8N3J9 261 aa17.07■□□□□ 0.32
SMURF1-201ENST00000361125 H3BUT2 72 aa17.06■□□□□ 0.32
SMURF1-201ENST00000361125 IGKCP01834 107 aa17.06■□□□□ 0.32
SMURF1-201ENST00000361125 ERCC8Q13216 396 aa17.06■□□□□ 0.32
SMURF1-201ENST00000361125 TMEM8BA6NDV4 472 aa17.06■□□□□ 0.32
SMURF1-201ENST00000361125 WIPF3A6NGB9 483 aa17.06■□□□□ 0.32
SMURF1-201ENST00000361125 SSC4DQ8WTU2 575 aa17.06■□□□□ 0.32
SMURF1-201ENST00000361125 LY96Q9Y6Y9 160 aa17.06■□□□□ 0.32
SMURF1-201ENST00000361125 ANAPC1Q9H1A4 1944 aa17.06■□□□□ 0.32
SMURF1-201ENST00000361125 BEND2Q8NDZ0 799 aa17.06■□□□□ 0.32
SMURF1-201ENST00000361125 ADARB2-AS1A8MUL3 147 aa17.05■□□□□ 0.32
SMURF1-201ENST00000361125 A0A1W2PPI3 338 aa17.05■□□□□ 0.32
SMURF1-201ENST00000361125 USMG5Q96IX5 58 aa17.05■□□□□ 0.32
SMURF1-201ENST00000361125 ESPL1Q14674 2120 aa17.05■□□□□ 0.32
SMURF1-201ENST00000361125 TMEM249Q2WGJ8 235 aa17.05■□□□□ 0.32
SMURF1-201ENST00000361125 LAGE3Q14657 143 aa17.05■□□□□ 0.32
SMURF1-201ENST00000361125 IGFL3Q6UXB1 125 aa17.05■□□□□ 0.32
SMURF1-201ENST00000361125 TRAV2A0A0B4J234 112 aa17.05■□□□□ 0.32
SMURF1-201ENST00000361125 DMRTC2Q8IXT2 367 aaPredicted RBP17.05■□□□□ 0.32
SMURF1-201ENST00000361125 RHPN1-AS1Q9BWJ2 59 aa17.05■□□□□ 0.32
SMURF1-201ENST00000361125 C11orf68Q9H3H3 251 aaKnown RBP17.05■□□□□ 0.32
SMURF1-201ENST00000361125 A0A0U1RRA0 63 aa17.04■□□□□ 0.32
SMURF1-201ENST00000361125 C9orf139Q6ZV77 190 aa17.04■□□□□ 0.32
SMURF1-201ENST00000361125 A0A1B0GWB2 263 aa17.04■□□□□ 0.32
SMURF1-201ENST00000361125 PAX9P55771 341 aa17.04■□□□□ 0.32
SMURF1-201ENST00000361125 NUP35Q8NFH5 326 aa17.04■□□□□ 0.32
SMURF1-201ENST00000361125 TRGV1A0A0A0MS02 117 aa17.04■□□□□ 0.32
SMURF1-201ENST00000361125 TSPAN13O95857 204 aa17.04■□□□□ 0.32
SMURF1-201ENST00000361125 UBE2E2Q96LR5 201 aa17.04■□□□□ 0.32
SMURF1-201ENST00000361125 HELZP42694 1942 aaKnown RBP17.04■□□□□ 0.32
SMURF1-201ENST00000361125 RBMY1BA6NDE4 496 aaKnown RBP17.04■□□□□ 0.32
SMURF1-201ENST00000361125 RBMY1EA6NEQ0 496 aaKnown RBP17.04■□□□□ 0.32
SMURF1-201ENST00000361125 RBMY1DP0C7P1 496 aaKnown RBP17.04■□□□□ 0.32
SMURF1-201ENST00000361125 RBMY1A1P0DJD3 496 aaKnown RBP17.04■□□□□ 0.32
SMURF1-201ENST00000361125 RBMY1CP0DJD4 496 aa17.04■□□□□ 0.32
SMURF1-201ENST00000361125 OR9G4Q8NGQ1 327 aa17.04■□□□□ 0.32
SMURF1-201ENST00000361125 IFI27L1Q96BM0 104 aa17.04■□□□□ 0.32
SMURF1-201ENST00000361125 KIAA1671Q9BY89 1806 aa17.04■□□□□ 0.32
SMURF1-201ENST00000361125 FANCMQ8IYD8 2048 aa17.04■□□□□ 0.32
SMURF1-201ENST00000361125 FRMPD3Q5JV73 1810 aa17.04■□□□□ 0.32
SMURF1-201ENST00000361125 CD300EQ496F6 205 aaPredicted RBP17.03■□□□□ 0.32
SMURF1-201ENST00000361125 NHP2Q9NX24 153 aaKnown RBP17.03■□□□□ 0.32
SMURF1-201ENST00000361125 CRPP02741 224 aa17.03■□□□□ 0.32
SMURF1-201ENST00000361125 IGHV4-39P01824 125 aa17.03■□□□□ 0.32
SMURF1-201ENST00000361125 MSMBP08118 114 aa17.03■□□□□ 0.32
SMURF1-201ENST00000361125 TTC32Q5I0X7 151 aa17.03■□□□□ 0.32
SMURF1-201ENST00000361125 RASL11AQ6T310 242 aa17.03■□□□□ 0.32
SMURF1-201ENST00000361125 ATP6V0E1O15342 81 aa17.03■□□□□ 0.32
SMURF1-201ENST00000361125 FNDC4Q9H6D8 234 aaPredicted RBP17.03■□□□□ 0.32
SMURF1-201ENST00000361125 OVOL3O00110 214 aa17.02■□□□□ 0.32
SMURF1-201ENST00000361125 SYNJ2BPP57105 145 aa17.02■□□□□ 0.32
SMURF1-201ENST00000361125 ZNF318Q5VUA4 2279 aa17.02■□□□□ 0.32
SMURF1-201ENST00000361125 Q8TCH9 128 aa17.02■□□□□ 0.31
SMURF1-201ENST00000361125 PHF3Q92576 2039 aaKnown RBP17.02■□□□□ 0.31
SMURF1-201ENST00000361125 ZNF815PA8K554 130 aa17.01■□□□□ 0.31
SMURF1-201ENST00000361125 Q5PR19 223 aa17.01■□□□□ 0.31
SMURF1-201ENST00000361125 RNF182Q8N6D2 247 aa17.01■□□□□ 0.31
SMURF1-201ENST00000361125 C17orf58Q2M2W7 97 aa17.01■□□□□ 0.31
SMURF1-201ENST00000361125 C5orf30Q96GV9 206 aa17.01■□□□□ 0.31
SMURF1-201ENST00000361125 LINC00479Q96M42 142 aa17.01■□□□□ 0.31
SMURF1-201ENST00000361125 ZNF876PQ49A33 203 aa17.01■□□□□ 0.31
SMURF1-201ENST00000361125 DTX1Q86Y01 620 aa17.01■□□□□ 0.31
SMURF1-201ENST00000361125 LINC00477Q96M19 166 aa17.01■□□□□ 0.31
SMURF1-201ENST00000361125 CEACAM8P31997 349 aaPredicted RBP17■□□□□ 0.31
SMURF1-201ENST00000361125 UBE2E1P51965 193 aa17■□□□□ 0.31
SMURF1-201ENST00000361125 PRADC1Q9BSG0 188 aa17■□□□□ 0.31
SMURF1-201ENST00000361125 C3orf79P0CE67 100 aa17■□□□□ 0.31
SMURF1-201ENST00000361125 LMO1P25800 156 aa17■□□□□ 0.31
SMURF1-201ENST00000361125 ZNF726P1Q15940 193 aa17■□□□□ 0.31
SMURF1-201ENST00000361125 RTTNQ86VV8 2226 aa17■□□□□ 0.31
SMURF1-201ENST00000361125 NDUFS8O00217 210 aa16.99■□□□□ 0.31
SMURF1-201ENST00000361125 C14orf178Q8N769 122 aaPredicted RBP16.99■□□□□ 0.31
SMURF1-201ENST00000361125 PRSS33Q8NF86 280 aa16.99■□□□□ 0.31
SMURF1-201ENST00000361125 Q96MF0 132 aa16.99■□□□□ 0.31
SMURF1-201ENST00000361125 CMC4P56277 68 aaPredicted RBP16.99■□□□□ 0.31
SMURF1-201ENST00000361125 NPC2P61916 151 aa16.99■□□□□ 0.31
SMURF1-201ENST00000361125 DEFB121Q5J5C9 76 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms