RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 TRAV3A0A0B4J244 114 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 INSP01308 110 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 NSUN5P1Q3KNT7 163 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 CFAP161Q6P656 301 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 BRD3OSQ6XYD6 125 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 Q6ZR03 302 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 KLHL30-AS1Q8NEE0 82 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 NUDT11Q96G61 164 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 SEPSECSQ9HD40 501 aaKnown RBP3.94□□□□□ -1.78
SCN3A-202ENST00000360093 RBMY1BA6NDE4 496 aaKnown RBP3.94□□□□□ -1.78
SCN3A-202ENST00000360093 RBMY1EA6NEQ0 496 aaKnown RBP3.94□□□□□ -1.78
SCN3A-202ENST00000360093 DKK1O94907 266 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 RBMY1DP0C7P1 496 aaKnown RBP3.94□□□□□ -1.78
SCN3A-202ENST00000360093 RBMY1A1P0DJD3 496 aaKnown RBP3.94□□□□□ -1.78
SCN3A-202ENST00000360093 RBMY1CP0DJD4 496 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 SEC11AP67812 179 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 LCN12Q6JVE5 192 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 IGKV1-16P04430 117 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 C10orf55Q5SWW7 151 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 FOXC2Q99958 501 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 JKAMPQ9P055 326 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 A0A1W2PPI3 338 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 CD33P20138 364 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 C17orf58Q2M2W7 97 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 MUC21Q5SSG8 566 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 TMEM75Q8N9X5 138 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 DPH3Q96FX2 82 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 C18orf15Q96N68 181 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 SHANK2-AS3Q9BTD1 123 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 DPM2O94777 84 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 RPL15P61313 204 aaKnown RBP3.93□□□□□ -1.78
SCN3A-202ENST00000360093 LAGE3Q14657 143 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 SPATA31B1PQ5VZV4 182 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 GLMPQ8WWB7 406 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 NDUFS6O75380 124 aaKnown RBP3.93□□□□□ -1.78
SCN3A-202ENST00000360093 RCHY1Q96PM5 261 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 SLC25A2Q9BXI2 301 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 LCNL1Q6ZST4 164 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 LINC00518Q8N0U6 118 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 MCRIP2Q9BUT9 160 aaKnown RBP3.93□□□□□ -1.78
SCN3A-202ENST00000360093 RHPN1-AS1Q9BWJ2 59 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 PRDM13Q9H4Q3 707 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 IGKV3OR2-268A0A0C4DH90 116 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 RNF223E7ERA6 249 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 CRPP02741 224 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 ADMP35318 185 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 RNF182Q8N6D2 247 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 C1orf147Q96MC9 270 aaPredicted RBP3.93□□□□□ -1.78
SCN3A-202ENST00000360093 FAM231BA6NCW3 169 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 GCSAMLQ5JQS6 135 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 LINC01551Q86U37 167 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 VGLL1Q99990 258 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 DPH3P1Q9H4G8 78 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 CHD3Q12873 2000 aaKnown RBP3.93□□□□□ -1.78
SCN3A-202ENST00000360093 ABCA1O95477 2261 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 NUP210LQ5VU65 1888 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 TRAV5A0A0B4J249 113 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 TRAV8-6A0A0B4J262 113 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 H7C2G1 150 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 RPL36AP83881 106 aaKnown RBP3.93□□□□□ -1.78
SCN3A-202ENST00000360093 EXOC3-AS1Q8N2X6 119 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 RPL36ALQ969Q0 106 aaKnown RBP3.93□□□□□ -1.78
SCN3A-202ENST00000360093 EML6Q6ZMW3 1958 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 C15orf65H3BRN8 121 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 VCYO14598 125 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 EMP1P54849 157 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 Q96MF0 132 aa3.93□□□□□ -1.78
SCN3A-202ENST00000360093 LINC01619G3V211 115 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 NDUFA4O00483 81 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 TCF21O43680 179 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 LOXP28300 417 aaPredicted RBP3.92□□□□□ -1.78
SCN3A-202ENST00000360093 POU2AF1Q16633 256 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 RSPO1Q2MKA7 263 aaPredicted RBP3.92□□□□□ -1.78
SCN3A-202ENST00000360093 RNF144BQ7Z419 303 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 WDR86Q86TI4 376 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 VSIRQ9H7M9 311 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 IGKV1-6A0A0C4DH72 117 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 KRTAP27-1Q3LI81 207 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 CT83Q5H943 113 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 NRN1Q9NPD7 142 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 IGKV2-40A0A087WW87 121 aaPredicted RBP3.92□□□□□ -1.78
SCN3A-202ENST00000360093 SRRM4A7MD48 611 aaKnown RBP3.92□□□□□ -1.78
SCN3A-202ENST00000360093 ADARB2-AS1A8MUL3 147 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 IGKV2D-40P01614 121 aaPredicted RBP3.92□□□□□ -1.78
SCN3A-202ENST00000360093 NIT1Q86X76 327 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 LINC00527Q9UJ94 153 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 DOPEY2Q9Y3R5 2298 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 SERF1AO75920 110 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 ZNF688P0C7X2 276 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 DMRTC2Q8IXT2 367 aaPredicted RBP3.92□□□□□ -1.78
SCN3A-202ENST00000360093 RPRMLQ8N4K4 120 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 SRSF2Q01130 221 aaKnown RBP3.92□□□□□ -1.78
SCN3A-202ENST00000360093 FBLN7Q53RD9 439 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 Q6ZSR3 168 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 OR9G4Q8NGQ1 327 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 PCDH15Q96QU1 1955 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 MS4A6AQ9H2W1 248 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 TMEM14CQ9P0S9 112 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 ATP6V0E1O15342 81 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 PLP1P60201 277 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms