RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 FAM223AQ8IWN6 122 aa10.76□□□□□ -0.69
SCN8A-202ENST00000355133 C14orf178Q8N769 122 aaPredicted RBP10.76□□□□□ -0.69
SCN8A-202ENST00000355133 CNOT1A5YKK6 2376 aaKnown RBP10.76□□□□□ -0.69
SCN8A-202ENST00000355133 TRAV8-1A0A0A6YYK1 113 aa10.75□□□□□ -0.69
SCN8A-202ENST00000355133 OVOL3O00110 214 aa10.75□□□□□ -0.69
SCN8A-202ENST00000355133 PSCAO43653 123 aa10.75□□□□□ -0.69
SCN8A-202ENST00000355133 MORN3Q6PF18 240 aaPredicted RBP10.75□□□□□ -0.69
SCN8A-202ENST00000355133 OR2K2Q8NGT1 345 aa10.75□□□□□ -0.69
SCN8A-202ENST00000355133 PSG3Q16557 428 aa10.75□□□□□ -0.69
SCN8A-202ENST00000355133 SSC4DQ8WTU2 575 aa10.75□□□□□ -0.69
SCN8A-202ENST00000355133 LINC00477Q96M19 166 aa10.75□□□□□ -0.69
SCN8A-202ENST00000355133 JPT2Q9H910 190 aa10.75□□□□□ -0.69
SCN8A-202ENST00000355133 GLRX5Q86SX6 157 aa10.75□□□□□ -0.69
SCN8A-202ENST00000355133 C3orf56Q8N813 242 aa10.75□□□□□ -0.69
SCN8A-202ENST00000355133 KIF26BQ2KJY2 2108 aa10.75□□□□□ -0.69
SCN8A-202ENST00000355133 INSP01308 110 aa10.75□□□□□ -0.69
SCN8A-202ENST00000355133 IGKV1-16P04430 117 aa10.75□□□□□ -0.69
SCN8A-202ENST00000355133 ERCC8Q13216 396 aa10.75□□□□□ -0.69
SCN8A-202ENST00000355133 M0R2P5 195 aa10.75□□□□□ -0.69
SCN8A-202ENST00000355133 RPRMLQ8N4K4 120 aa10.75□□□□□ -0.69
SCN8A-202ENST00000355133 DEFB130BP0DP73 79 aa10.74□□□□□ -0.69
SCN8A-202ENST00000355133 DEFB130AP0DP74 79 aa10.74□□□□□ -0.69
SCN8A-202ENST00000355133 ORAOV1Q8WV07 137 aa10.74□□□□□ -0.69
SCN8A-202ENST00000355133 A0A087WWL8 130 aa10.74□□□□□ -0.69
SCN8A-202ENST00000355133 PAX4O43316 350 aa10.74□□□□□ -0.69
SCN8A-202ENST00000355133 TOMM40O96008 361 aa10.74□□□□□ -0.69
SCN8A-202ENST00000355133 GATD1Q8NB37 220 aa10.74□□□□□ -0.69
SCN8A-202ENST00000355133 RNF166Q96A37 237 aaPredicted RBP10.74□□□□□ -0.69
SCN8A-202ENST00000355133 TRBV6-6A0A0A6YYG2 114 aa10.74□□□□□ -0.69
SCN8A-202ENST00000355133 GGTLC3B5MD39 225 aa10.74□□□□□ -0.69
SCN8A-202ENST00000355133 TEX43Q6ZNM6 134 aa10.74□□□□□ -0.69
SCN8A-202ENST00000355133 LINC01551Q86U37 167 aa10.74□□□□□ -0.69
SCN8A-202ENST00000355133 C1orf159Q96HA4 380 aa10.74□□□□□ -0.69
SCN8A-202ENST00000355133 MEGF9Q9H1U4 602 aa10.74□□□□□ -0.69
SCN8A-202ENST00000355133 CACNA1DQ01668 2161 aa10.74□□□□□ -0.69
SCN8A-202ENST00000355133 SLC25A2Q9BXI2 301 aa10.73□□□□□ -0.69
SCN8A-202ENST00000355133 PCP4P48539 62 aa10.73□□□□□ -0.69
SCN8A-202ENST00000355133 QRFPP83859 136 aa10.73□□□□□ -0.69
SCN8A-202ENST00000355133 MTURNQ8N3F0 131 aa10.73□□□□□ -0.69
SCN8A-202ENST00000355133 CSTL1Q9H114 145 aa10.73□□□□□ -0.69
SCN8A-202ENST00000355133 Q5PR19 223 aa10.73□□□□□ -0.69
SCN8A-202ENST00000355133 A0A0G2JRQ6 117 aa10.73□□□□□ -0.69
SCN8A-202ENST00000355133 K7ENP7 123 aa10.73□□□□□ -0.69
SCN8A-202ENST00000355133 TMEM155Q4W5P6 130 aa10.73□□□□□ -0.69
SCN8A-202ENST00000355133 FREM3P0C091 2139 aa10.73□□□□□ -0.69
SCN8A-202ENST00000355133 C15orf62A8K5M9 175 aa10.73□□□□□ -0.69
SCN8A-202ENST00000355133 RNASE2P10153 161 aaKnown RBP10.73□□□□□ -0.69
SCN8A-202ENST00000355133 PRTN3P24158 256 aa10.73□□□□□ -0.69
SCN8A-202ENST00000355133 NUP35Q8NFH5 326 aa10.73□□□□□ -0.69
SCN8A-202ENST00000355133 HS3ST6Q96QI5 342 aa10.73□□□□□ -0.69
SCN8A-202ENST00000355133 RNF114Q9Y508 228 aa10.72□□□□□ -0.69
SCN8A-202ENST00000355133 SMKR1H3BMG3 65 aa10.72□□□□□ -0.69
SCN8A-202ENST00000355133 MSMBP08118 114 aa10.72□□□□□ -0.69
SCN8A-202ENST00000355133 HIST1H2BLQ99880 126 aa10.72□□□□□ -0.69
SCN8A-202ENST00000355133 DEFB131AP59861 70 aa10.72□□□□□ -0.69
SCN8A-202ENST00000355133 DAZ1Q9NQZ3 744 aaKnown RBP10.72□□□□□ -0.69
SCN8A-202ENST00000355133 ERG28Q9UKR5 140 aa10.72□□□□□ -0.69
SCN8A-202ENST00000355133 MED12Q93074 2177 aa10.72□□□□□ -0.69
SCN8A-202ENST00000355133 C1QTNF4Q9BXJ3 329 aa10.71□□□□□ -0.69
SCN8A-202ENST00000355133 COL4A6Q14031 1691 aa10.71□□□□□ -0.69
SCN8A-202ENST00000355133 TRAV13-1A0A0B4J241 112 aa10.71□□□□□ -0.69
SCN8A-202ENST00000355133 LINC00587B1AMM8 73 aa10.71□□□□□ -0.69
SCN8A-202ENST00000355133 VCYO14598 125 aa10.71□□□□□ -0.69
SCN8A-202ENST00000355133 TRPM7Q96QT4 1865 aa10.71□□□□□ -0.69
SCN8A-202ENST00000355133 TRAV1-1A0A0B4J248 108 aa10.71□□□□□ -0.69
SCN8A-202ENST00000355133 LOC105371267A0A1B0GV96 52 aa10.71□□□□□ -0.69
SCN8A-202ENST00000355133 DTX1Q86Y01 620 aa10.71□□□□□ -0.69
SCN8A-202ENST00000355133 ZNF479Q96JC4 524 aa10.71□□□□□ -0.69
SCN8A-202ENST00000355133 SMPXQ9UHP9 88 aa10.71□□□□□ -0.69
SCN8A-202ENST00000355133 Q96MF0 132 aa10.71□□□□□ -0.7
SCN8A-202ENST00000355133 TMEM238C9JI98 176 aa10.71□□□□□ -0.7
SCN8A-202ENST00000355133 ATP6V0E1O15342 81 aa10.71□□□□□ -0.7
SCN8A-202ENST00000355133 TRAV8-4A0A0B4J246 113 aa10.7□□□□□ -0.7
SCN8A-202ENST00000355133 C6orf226Q5I0X4 101 aa10.7□□□□□ -0.7
SCN8A-202ENST00000355133 NDUFAF3Q9BU61 184 aa10.7□□□□□ -0.7
SCN8A-202ENST00000355133 TMEM242Q9NWH2 141 aa10.7□□□□□ -0.7
SCN8A-202ENST00000355133 Q71RC1 249 aaPredicted RBP10.7□□□□□ -0.7
SCN8A-202ENST00000355133 Q6ZRM9 215 aa10.7□□□□□ -0.7
SCN8A-202ENST00000355133 FOXL2NBQ6ZUU3 175 aa10.7□□□□□ -0.7
SCN8A-202ENST00000355133 RASL10AQ92737 203 aa10.7□□□□□ -0.7
SCN8A-202ENST00000355133 NAA38Q9BRA0 125 aaKnown RBP10.7□□□□□ -0.7
SCN8A-202ENST00000355133 TRBV24-1A0A075B6N3 115 aa10.7□□□□□ -0.7
SCN8A-202ENST00000355133 POLEQ07864 2286 aa10.7□□□□□ -0.7
SCN8A-202ENST00000355133 A0A1W2PPI3 338 aa10.69□□□□□ -0.7
SCN8A-202ENST00000355133 LINC01549A6NIU2 74 aa10.69□□□□□ -0.7
SCN8A-202ENST00000355133 HSD52Q0P140 79 aa10.69□□□□□ -0.7
SCN8A-202ENST00000355133 ATXN8Q156A1 80 aa10.69□□□□□ -0.7
SCN8A-202ENST00000355133 NDUFS8O00217 210 aa10.69□□□□□ -0.7
SCN8A-202ENST00000355133 CFHR3Q02985 330 aa10.69□□□□□ -0.7
SCN8A-202ENST00000355133 DKK1O94907 266 aa10.69□□□□□ -0.7
SCN8A-202ENST00000355133 TMEM158Q8WZ71 300 aa10.69□□□□□ -0.7
SCN8A-202ENST00000355133 HIST3H2BBQ8N257 126 aa10.69□□□□□ -0.7
SCN8A-202ENST00000355133 KNCNA6PVL3 124 aa10.69□□□□□ -0.7
SCN8A-202ENST00000355133 AMBPP02760 352 aa10.69□□□□□ -0.7
SCN8A-202ENST00000355133 SAMD5Q5TGI4 173 aa10.69□□□□□ -0.7
SCN8A-202ENST00000355133 PLEKHB2Q96CS7 222 aa10.69□□□□□ -0.7
SCN8A-202ENST00000355133 XCL2Q9UBD3 114 aa10.69□□□□□ -0.7
SCN8A-202ENST00000355133 A6NNC1 897 aa10.68□□□□□ -0.7
SCN8A-202ENST00000355133 UBE2E1P51965 193 aa10.68□□□□□ -0.7
SCN8A-202ENST00000355133 LINC00479Q96M42 142 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms