RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 ZNF98A6NK75 572 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 AP4M1O00189 453 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 UBE2CO00762 179 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 ISLRO14498 428 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 SCGB2A1O75556 95 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 IGHG2P01859 326 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 TRGC2P03986 189 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 IL4P05112 153 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 S100A9P06702 114 aaKnown RBP5.38□□□□□ -1.55
TRIM55-203ENST00000350034 COL8A1P27658 744 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 RANP62826 216 aaKnown RBP5.38□□□□□ -1.55
TRIM55-203ENST00000350034 ECSCRQ19T08 205 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 C15orf32Q32M92 178 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 SMUG1Q53HV7 270 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 KCNIP4Q6PIL6 250 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 PRSS57Q6UWY2 283 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 FAM231DQ6ZW35 169 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 S100A7AQ86SG5 101 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 BPIFA4PQ86YQ2 179 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 KRTAP1-3Q8IUG1 177 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 BCL6BQ8N143 479 aaPredicted RBP5.38□□□□□ -1.55
TRIM55-203ENST00000350034 LYPD1Q8N2G4 141 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 SMIM12Q96EX1 92 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 BTF3L4Q96K17 158 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 LINC00479Q96M42 142 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 CCDC140Q96MF4 163 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 ATG101Q9BSB4 218 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 CHRDL1Q9BU40 450 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 Q9H3A6 140 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 SAV1Q9H4B6 383 aaPredicted RBP5.38□□□□□ -1.55
TRIM55-203ENST00000350034 IL36BQ9NZH7 164 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 PKD1L1Q8TDX9 2849 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 HRNRQ86YZ3 2850 aaPredicted RBP5.37□□□□□ -1.55
TRIM55-203ENST00000350034 TRBV7-1A0A0A6YYK4 115 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 OR2T8A6NH00 312 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 FAM223BA6NKX1 122 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 PPP5D1E7EU14 171 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 H3BUA1 57 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 H3BUX3 64 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 HIST1H2BKO60814 126 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 IGHV3-23P01764 117 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 TCRAP04437 139 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 SLC25A5P05141 298 aaKnown RBP5.37□□□□□ -1.55
TRIM55-203ENST00000350034 HIST1H2BJP06899 126 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 IGHV4-31P0DP07 118 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 HNF1AP20823 631 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 HIST1H2BOP23527 126 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 PPIFP30405 207 aaKnown RBP5.37□□□□□ -1.55
TRIM55-203ENST00000350034 HIST1H2BBP33778 126 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 FAM3BP58499 235 aaPredicted RBP5.37□□□□□ -1.55
TRIM55-203ENST00000350034 HIST1H2BDP58876 126 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 RPL15P61313 204 aaKnown RBP5.37□□□□□ -1.55
TRIM55-203ENST00000350034 SNRPEP62304 92 aaKnown RBP5.37□□□□□ -1.55
TRIM55-203ENST00000350034 HIST1H2BCP62807 126 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 GNG5P63218 68 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 OR5I1Q13606 314 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 PDE6HQ13956 83 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 HIST2H2BEQ16778 126 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.37□□□□□ -1.55
TRIM55-203ENST00000350034 SIGLEC15Q6ZMC9 328 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 C9orf139Q6ZV77 190 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 BAGE2Q86Y30 109 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 FAM223AQ8IWN6 122 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 ARL6IP6Q8N6S5 226 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 OR4F17Q8NGA8 305 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 BLNKQ8WV28 456 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 FRZBQ92765 325 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 HIST1H2BHQ93079 126 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 EEF1AKMT3Q96AZ1 226 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 HIST1H2BNQ99877 126 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 HIST1H2BMQ99879 126 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 MLST8Q9BVC4 326 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 ZFAND3Q9H8U3 227 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 PITPNC1Q9UKF7 332 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 CSMD2Q7Z408 3487 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 APCP25054 2843 aa5.37□□□□□ -1.55
TRIM55-203ENST00000350034 AKAP6Q13023 2319 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 TRAV34A0A0B4J273 112 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 A0A1W2PPQ1 181 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 ZNF320A2RRD8 509 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 CLPSL1A2RUU4 121 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 RNF223E7ERA6 249 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 H3BTX0 84 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 SLC17A3O00476 420 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 ZNF253O75346 499 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 TGFAP01135 160 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 LTAP01374 205 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 IGLV2-11P01706 119 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 CLEC3BP05452 202 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 SNRPCP09234 159 aaKnown RBP5.36□□□□□ -1.55
TRIM55-203ENST00000350034 TRGC1P0CF51 173 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 RPL7P18124 248 aaKnown RBP5.36□□□□□ -1.55
TRIM55-203ENST00000350034 HOXA5P20719 270 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 GPR183P32249 361 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 CFHR3Q02985 330 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 ATP5G2Q06055 141 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 LY6EQ16553 131 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 DEFB112Q30KQ8 113 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 COA6Q5JTJ3 125 aaKnown RBP5.36□□□□□ -1.55
TRIM55-203ENST00000350034 ACTL10Q5JWF8 245 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms