RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 MRPS17Q9Y2R5 130 aaKnown RBP12.28□□□□□ -0.44
LMNA-201ENST00000347559 CECR9P0C854 216 aa12.27□□□□□ -0.44
LMNA-201ENST00000347559 ATP5IP56385 69 aaPredicted RBP12.27□□□□□ -0.44
LMNA-201ENST00000347559 ATP5G2Q06055 141 aa12.27□□□□□ -0.44
LMNA-201ENST00000347559 PRELID3AQ96N28 172 aa12.27□□□□□ -0.44
LMNA-201ENST00000347559 MRPL20Q9BYC9 149 aaKnown RBP12.27□□□□□ -0.44
LMNA-201ENST00000347559 TMEM238LA0A1B0GVL6 79 aa12.27□□□□□ -0.45
LMNA-201ENST00000347559 SPRY3O43610 288 aa12.27□□□□□ -0.45
LMNA-201ENST00000347559 AMTNQ6UX39 209 aa12.27□□□□□ -0.45
LMNA-201ENST00000347559 AMN1Q8IY45 258 aa12.27□□□□□ -0.45
LMNA-201ENST00000347559 DSCAMO60469 2012 aa12.27□□□□□ -0.45
LMNA-201ENST00000347559 C22orf46C9J442 243 aa12.26□□□□□ -0.45
LMNA-201ENST00000347559 SMKR1H3BMG3 65 aa12.26□□□□□ -0.45
LMNA-201ENST00000347559 H3BMG7 143 aa12.26□□□□□ -0.45
LMNA-201ENST00000347559 SIVA1O15304 175 aa12.26□□□□□ -0.45
LMNA-201ENST00000347559 C6orf15Q6UXA7 325 aaPredicted RBP12.26□□□□□ -0.45
LMNA-201ENST00000347559 FAM222BQ8WU58 562 aa12.26□□□□□ -0.45
LMNA-201ENST00000347559 TMEM213A2RRL7 107 aa12.26□□□□□ -0.45
LMNA-201ENST00000347559 K7EQM0 130 aa12.26□□□□□ -0.45
LMNA-201ENST00000347559 IGFBP4P22692 258 aa12.26□□□□□ -0.45
LMNA-201ENST00000347559 CR1LQ2VPA4 569 aa12.26□□□□□ -0.45
LMNA-201ENST00000347559 IGKV2D-26A0A0A0MRZ7 120 aa12.26□□□□□ -0.45
LMNA-201ENST00000347559 NPIPB6E9PJ23 425 aa12.26□□□□□ -0.45
LMNA-201ENST00000347559 CGB3P0DN86 165 aa12.26□□□□□ -0.45
LMNA-201ENST00000347559 CGB7P0DN87 165 aa12.26□□□□□ -0.45
LMNA-201ENST00000347559 SUB1P53999 127 aaKnown RBP eCLIP12.26□□□□□ -0.455e-11■■■■■ 47.2
LMNA-201ENST00000347559 SPAG8Q99932 426 aaPredicted RBP12.26□□□□□ -0.45
LMNA-201ENST00000347559 SPANXB1Q9NS25 103 aaPredicted RBP12.26□□□□□ -0.45
LMNA-201ENST00000347559 SLC25A17O43808 307 aa12.25□□□□□ -0.45
LMNA-201ENST00000347559 HBDP02042 147 aa12.25□□□□□ -0.45
LMNA-201ENST00000347559 SPRR3Q9UBC9 169 aa12.25□□□□□ -0.45
LMNA-201ENST00000347559 PCSK5Q92824 1860 aa12.25□□□□□ -0.45
LMNA-201ENST00000347559 DMDP11532 3685 aa12.25□□□□□ -0.45
LMNA-201ENST00000347559 TMEM189A5PLL7 270 aa12.25□□□□□ -0.45
LMNA-201ENST00000347559 PATE3B3GLJ2 98 aa12.25□□□□□ -0.45
LMNA-201ENST00000347559 CXCL12P48061 93 aa12.25□□□□□ -0.45
LMNA-201ENST00000347559 CRYBA4P53673 196 aa12.25□□□□□ -0.45
LMNA-201ENST00000347559 ROS1P08922 2347 aa12.25□□□□□ -0.45
LMNA-201ENST00000347559 GP9P14770 177 aa12.24□□□□□ -0.45
LMNA-201ENST00000347559 INSL3P51460 131 aa12.24□□□□□ -0.45
LMNA-201ENST00000347559 LYZP61626 148 aa12.24□□□□□ -0.45
LMNA-201ENST00000347559 CCL13Q99616 98 aa12.24□□□□□ -0.45
LMNA-201ENST00000347559 CHAC1Q9BUX1 264 aa12.24□□□□□ -0.45
LMNA-201ENST00000347559 TRGV5A0A0B4J1U4 118 aa12.24□□□□□ -0.45
LMNA-201ENST00000347559 RP1L1Q8IWN7 2480 aaPredicted RBP12.24□□□□□ -0.45
LMNA-201ENST00000347559 C19orf67A6NJJ6 358 aa12.24□□□□□ -0.45
LMNA-201ENST00000347559 FAM216BQ8N7L0 139 aa12.23□□□□□ -0.45
LMNA-201ENST00000347559 RAB9BQ9NP90 201 aa12.23□□□□□ -0.45
LMNA-201ENST00000347559 NTN3O00634 580 aaPredicted RBP12.23□□□□□ -0.45
LMNA-201ENST00000347559 NDUFS7O75251 213 aa12.23□□□□□ -0.45
LMNA-201ENST00000347559 FCER1GP30273 86 aa12.23□□□□□ -0.45
LMNA-201ENST00000347559 A0A1W2PRD5 423 aa12.22□□□□□ -0.45
LMNA-201ENST00000347559 A0A1W2PRF3 423 aa12.22□□□□□ -0.45
LMNA-201ENST00000347559 A0A1W2PRM7 423 aa12.22□□□□□ -0.45
LMNA-201ENST00000347559 CGB1A6NKQ9 187 aa12.22□□□□□ -0.45
LMNA-201ENST00000347559 MSMPQ1L6U9 139 aa12.22□□□□□ -0.45
LMNA-201ENST00000347559 ZCCHC24Q8N2G6 241 aaKnown RBP12.22□□□□□ -0.45
LMNA-201ENST00000347559 THAP8Q8NA92 274 aa12.22□□□□□ -0.45
LMNA-201ENST00000347559 ZNF785A8K8V0 405 aa12.22□□□□□ -0.45
LMNA-201ENST00000347559 OVOL3O00110 214 aa12.22□□□□□ -0.45
LMNA-201ENST00000347559 GTSCR1Q86UQ5 136 aa12.22□□□□□ -0.45
LMNA-201ENST00000347559 ORMDL3Q8N138 153 aa12.22□□□□□ -0.45
LMNA-201ENST00000347559 IGKV3-15P01624 115 aa12.22□□□□□ -0.45
LMNA-201ENST00000347559 IGLV2-11P01706 119 aa12.22□□□□□ -0.45
LMNA-201ENST00000347559 PRSS1P07477 247 aa12.22□□□□□ -0.45
LMNA-201ENST00000347559 TNFRSF1AP19438 455 aa12.22□□□□□ -0.45
LMNA-201ENST00000347559 PPIFP30405 207 aaKnown RBP12.22□□□□□ -0.45
LMNA-201ENST00000347559 LYZL1Q6UWQ5 148 aa12.22□□□□□ -0.45
LMNA-201ENST00000347559 OSR1Q8TAX0 266 aaPredicted RBP12.22□□□□□ -0.45
LMNA-201ENST00000347559 ZNF479Q96JC4 524 aa12.22□□□□□ -0.45
LMNA-201ENST00000347559 TPSG1Q9NRR2 321 aa12.22□□□□□ -0.45
LMNA-201ENST00000347559 PLCE1Q9P212 2302 aa12.21□□□□□ -0.45
LMNA-201ENST00000347559 KLRC4-KLRK1H3BQV0 150 aa12.21□□□□□ -0.45
LMNA-201ENST00000347559 MZT1Q08AG7 82 aa12.21□□□□□ -0.45
LMNA-201ENST00000347559 DIAPH2-AS1Q14236 149 aa12.21□□□□□ -0.45
LMNA-201ENST00000347559 C17orf77Q96MU5 243 aa12.21□□□□□ -0.45
LMNA-201ENST00000347559 CKS2P33552 79 aa12.21□□□□□ -0.46
LMNA-201ENST00000347559 Q6ZT83 130 aa12.21□□□□□ -0.46
LMNA-201ENST00000347559 TMEM105Q8N8V8 129 aa12.21□□□□□ -0.46
LMNA-201ENST00000347559 GEMIN7Q9H840 131 aaKnown RBP12.21□□□□□ -0.46
LMNA-201ENST00000347559 F8W1H4 67 aa12.2□□□□□ -0.46
LMNA-201ENST00000347559 LCNL1Q6ZST4 164 aa12.2□□□□□ -0.46
LMNA-201ENST00000347559 OTORQ9NRC9 128 aa12.2□□□□□ -0.46
LMNA-201ENST00000347559 RPUSD1Q9UJJ7 312 aaKnown RBP12.2□□□□□ -0.46
LMNA-201ENST00000347559 A0A1W2PPI3 338 aa12.2□□□□□ -0.46
LMNA-201ENST00000347559 PRR33A8MZF0 331 aa12.2□□□□□ -0.46
LMNA-201ENST00000347559 K7ESF4 209 aa12.2□□□□□ -0.46
LMNA-201ENST00000347559 NPYP01303 97 aa12.2□□□□□ -0.46
LMNA-201ENST00000347559 HIGD1AQ9Y241 93 aa12.2□□□□□ -0.46
LMNA-201ENST00000347559 TRBV25-1A0A075B6N4 114 aa12.2□□□□□ -0.46
LMNA-201ENST00000347559 SPATA25Q9BR10 227 aa12.2□□□□□ -0.46
LMNA-201ENST00000347559 AGRNO00468 2067 aa12.19□□□□□ -0.46
LMNA-201ENST00000347559 TPRP12270 2363 aaKnown RBP12.19□□□□□ -0.46
LMNA-201ENST00000347559 IGHV3-72A0A0B4J1Y9 119 aa12.19□□□□□ -0.46
LMNA-201ENST00000347559 IGLL5B9A064 214 aa12.19□□□□□ -0.46
LMNA-201ENST00000347559 ENSAO43768 121 aaKnown RBP12.19□□□□□ -0.46
LMNA-201ENST00000347559 MRPL51Q4U2R6 128 aaKnown RBP12.19□□□□□ -0.46
LMNA-201ENST00000347559 FOXI2Q6ZQN5 318 aa12.19□□□□□ -0.46
LMNA-201ENST00000347559 C8orf49Q96NF6 230 aa12.19□□□□□ -0.46
LMNA-201ENST00000347559 DCHS1Q96JQ0 3298 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms