RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 RPUSD4Q96CM3 377 aaKnown RBP10.43□□□□□ -0.74
HERPUD1-202ENST00000344114 RNF125Q96EQ8 232 aa10.43□□□□□ -0.74
HERPUD1-202ENST00000344114 OR51M1Q9H341 326 aa10.43□□□□□ -0.74
HERPUD1-202ENST00000344114 RPS10P5Q9NQ39 176 aa10.43□□□□□ -0.74
HERPUD1-202ENST00000344114 A0A087WWC5 75 aa10.42□□□□□ -0.74
HERPUD1-202ENST00000344114 WI2-2373I1.2A0A1W2PRP0 233 aa10.42□□□□□ -0.74
HERPUD1-202ENST00000344114 ADARB2-AS1A8MUL3 147 aa10.42□□□□□ -0.74
HERPUD1-202ENST00000344114 AP4M1O00189 453 aa10.42□□□□□ -0.74
HERPUD1-202ENST00000344114 C15orf32Q32M92 178 aa10.42□□□□□ -0.74
HERPUD1-202ENST00000344114 NSUN5P1Q3KNT7 163 aa10.42□□□□□ -0.74
HERPUD1-202ENST00000344114 NDUFA11Q86Y39 141 aa10.42□□□□□ -0.74
HERPUD1-202ENST00000344114 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.42□□□□□ -0.74
HERPUD1-202ENST00000344114 ZNF502Q8TBZ5 544 aa10.42□□□□□ -0.74
HERPUD1-202ENST00000344114 Q8WTZ3 238 aa10.42□□□□□ -0.74
HERPUD1-202ENST00000344114 C11orf52Q96A22 123 aa10.42□□□□□ -0.74
HERPUD1-202ENST00000344114 EEF1AKMT3Q96AZ1 226 aa10.42□□□□□ -0.74
HERPUD1-202ENST00000344114 SDF2L1Q9HCN8 221 aa10.42□□□□□ -0.74
HERPUD1-202ENST00000344114 SMCO4Q9NRQ5 59 aa10.42□□□□□ -0.74
HERPUD1-202ENST00000344114 MRPL27Q9P0M9 148 aaKnown RBP10.42□□□□□ -0.74
HERPUD1-202ENST00000344114 TRBV7-1A0A0A6YYK4 115 aa10.41□□□□□ -0.74
HERPUD1-202ENST00000344114 TRAV5A0A0B4J249 113 aa10.41□□□□□ -0.74
HERPUD1-202ENST00000344114 H3BRN7 92 aa10.41□□□□□ -0.74
HERPUD1-202ENST00000344114 IL4P05112 153 aa10.41□□□□□ -0.74
HERPUD1-202ENST00000344114 OR10J4P0C629 311 aa10.41□□□□□ -0.74
HERPUD1-202ENST00000344114 KIAA0141Q14154 515 aaPredicted RBP10.41□□□□□ -0.74
HERPUD1-202ENST00000344114 ZNF674Q2M3X9 581 aa10.41□□□□□ -0.74
HERPUD1-202ENST00000344114 CBLN2Q8IUK8 224 aa10.41□□□□□ -0.74
HERPUD1-202ENST00000344114 ZNF491Q8N8L2 437 aa10.41□□□□□ -0.74
HERPUD1-202ENST00000344114 OR4F17Q8NGA8 305 aa10.41□□□□□ -0.74
HERPUD1-202ENST00000344114 WIPF2Q8TF74 440 aaPredicted RBP10.41□□□□□ -0.74
HERPUD1-202ENST00000344114 C20orf24Q9BUV8 137 aa10.41□□□□□ -0.74
HERPUD1-202ENST00000344114 RNF24Q9Y225 148 aa10.41□□□□□ -0.74
HERPUD1-202ENST00000344114 S4R3C0 116 aa10.41□□□□□ -0.74
HERPUD1-202ENST00000344114 K7EIL1 84 aa10.4□□□□□ -0.74
HERPUD1-202ENST00000344114 NUPL2O15504 423 aaKnown RBP10.4□□□□□ -0.74
HERPUD1-202ENST00000344114 PYYP10082 97 aa10.4□□□□□ -0.74
HERPUD1-202ENST00000344114 CD28P10747 220 aa10.4□□□□□ -0.74
HERPUD1-202ENST00000344114 GP9P14770 177 aa10.4□□□□□ -0.74
HERPUD1-202ENST00000344114 S100A7P31151 101 aa10.4□□□□□ -0.74
HERPUD1-202ENST00000344114 TMEM241Q24JQ0 296 aa10.4□□□□□ -0.74
HERPUD1-202ENST00000344114 TMEM88Q6PEY1 159 aa10.4□□□□□ -0.74
HERPUD1-202ENST00000344114 TMEM190Q8WZ59 177 aa10.4□□□□□ -0.74
HERPUD1-202ENST00000344114 FXYD5Q96DB9 178 aa10.4□□□□□ -0.74
HERPUD1-202ENST00000344114 TCEAL7Q9BRU2 100 aa10.4□□□□□ -0.74
HERPUD1-202ENST00000344114 SHANK2-AS3Q9BTD1 123 aa10.4□□□□□ -0.74
HERPUD1-202ENST00000344114 SLC25A39Q9BZJ4 359 aaPredicted RBP10.4□□□□□ -0.74
HERPUD1-202ENST00000344114 NPFFR1Q9GZQ6 430 aa10.4□□□□□ -0.74
HERPUD1-202ENST00000344114 SERTAD4Q9NUC0 356 aa10.4□□□□□ -0.74
HERPUD1-202ENST00000344114 TMEM14CQ9P0S9 112 aa10.4□□□□□ -0.74
HERPUD1-202ENST00000344114 PRELID1Q9Y255 219 aa10.4□□□□□ -0.74
HERPUD1-202ENST00000344114 SCO2A0A1W2PP80 73 aa10.39□□□□□ -0.75
HERPUD1-202ENST00000344114 OR2T8A6NH00 312 aa10.39□□□□□ -0.75
HERPUD1-202ENST00000344114 CTSGP08311 255 aa10.39□□□□□ -0.75
HERPUD1-202ENST00000344114 NPPCP23582 126 aa10.39□□□□□ -0.75
HERPUD1-202ENST00000344114 ZNF600Q6ZNG1 722 aa10.39□□□□□ -0.75
HERPUD1-202ENST00000344114 Q8N2B8 174 aa10.39□□□□□ -0.75
HERPUD1-202ENST00000344114 WFDC9Q8NEX5 89 aa10.39□□□□□ -0.75
HERPUD1-202ENST00000344114 TUBA4BQ9H853 241 aa10.39□□□□□ -0.75
HERPUD1-202ENST00000344114 ZNF702PQ9H963 129 aa10.39□□□□□ -0.75
HERPUD1-202ENST00000344114 GGTLC3B5MD39 225 aa10.39□□□□□ -0.75
HERPUD1-202ENST00000344114 NDUFB4O95168 129 aa10.39□□□□□ -0.75
HERPUD1-202ENST00000344114 IGHV3-23P01764 117 aa10.39□□□□□ -0.75
HERPUD1-202ENST00000344114 PPIFP30405 207 aaKnown RBP10.39□□□□□ -0.75
HERPUD1-202ENST00000344114 GPR183P32249 361 aa10.39□□□□□ -0.75
HERPUD1-202ENST00000344114 ATP5G2Q06055 141 aa10.39□□□□□ -0.75
HERPUD1-202ENST00000344114 CCDC140Q96MF4 163 aa10.39□□□□□ -0.75
HERPUD1-202ENST00000344114 WWC2-AS2Q96NR7 200 aa10.39□□□□□ -0.75
HERPUD1-202ENST00000344114 CITED2Q99967 270 aaPredicted RBP10.39□□□□□ -0.75
HERPUD1-202ENST00000344114 TENM3Q9P273 2699 aa10.38□□□□□ -0.75
HERPUD1-202ENST00000344114 BMPR1BO00238 502 aa10.38□□□□□ -0.75
HERPUD1-202ENST00000344114 TRGV3P03979 118 aa10.38□□□□□ -0.75
HERPUD1-202ENST00000344114 IGLL1P15814 213 aa10.38□□□□□ -0.75
HERPUD1-202ENST00000344114 BLCAPP62952 87 aa10.38□□□□□ -0.75
HERPUD1-202ENST00000344114 ADIRFQ15847 76 aa10.38□□□□□ -0.75
HERPUD1-202ENST00000344114 USF2Q15853 346 aaPredicted RBP10.38□□□□□ -0.75
HERPUD1-202ENST00000344114 BPIFA4PQ86YQ2 179 aa10.38□□□□□ -0.75
HERPUD1-202ENST00000344114 C15orf54Q8N8G6 183 aa10.38□□□□□ -0.75
HERPUD1-202ENST00000344114 USMG5Q96IX5 58 aa10.38□□□□□ -0.75
HERPUD1-202ENST00000344114 MS4A10Q96PG2 267 aa10.38□□□□□ -0.75
HERPUD1-202ENST00000344114 LINC00527Q9UJ94 153 aa10.38□□□□□ -0.75
HERPUD1-202ENST00000344114 C9JCJ5 164 aa10.37□□□□□ -0.75
HERPUD1-202ENST00000344114 TGOLN2O43493 480 aa10.37□□□□□ -0.75
HERPUD1-202ENST00000344114 NBEAP1P0C6P0 100 aa10.37□□□□□ -0.75
HERPUD1-202ENST00000344114 HIST1H1EP10412 219 aaKnown RBP10.37□□□□□ -0.75
HERPUD1-202ENST00000344114 CD33P20138 364 aa10.37□□□□□ -0.75
HERPUD1-202ENST00000344114 ADMP35318 185 aa10.37□□□□□ -0.75
HERPUD1-202ENST00000344114 AKR1C3P42330 323 aa10.37□□□□□ -0.75
HERPUD1-202ENST00000344114 TPPP2P59282 170 aa10.37□□□□□ -0.75
HERPUD1-202ENST00000344114 RPL23P62829 140 aaKnown RBP10.37□□□□□ -0.75
HERPUD1-202ENST00000344114 SUMO1P63165 101 aaKnown RBP10.37□□□□□ -0.75
HERPUD1-202ENST00000344114 RELQ04864 619 aaPredicted RBP10.37□□□□□ -0.75
HERPUD1-202ENST00000344114 ZNF343Q6P1L6 599 aa10.37□□□□□ -0.75
HERPUD1-202ENST00000344114 CHRDL1Q9BU40 450 aa10.37□□□□□ -0.75
HERPUD1-202ENST00000344114 CTDSP1Q9GZU7 261 aa10.37□□□□□ -0.75
HERPUD1-202ENST00000344114 TMEM242Q9NWH2 141 aa10.37□□□□□ -0.75
HERPUD1-202ENST00000344114 RABAC1Q9UI14 185 aa10.37□□□□□ -0.75
HERPUD1-202ENST00000344114 LY96Q9Y6Y9 160 aa10.37□□□□□ -0.75
HERPUD1-202ENST00000344114 DNAH9Q9NYC9 4486 aa10.36□□□□□ -0.75
HERPUD1-202ENST00000344114 CXorf65A6NEN9 183 aa10.36□□□□□ -0.75
HERPUD1-202ENST00000344114 TSPAN4O14817 238 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms