RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 GNB1P62873 340 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 A0A0J9YW62 118 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 TRBV7-7A0A0K0K1E9 115 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 IGFBP6P24592 240 aaPredicted RBP3.1□□□□□ -1.91
SYNE2-202ENST00000344113 PRSS53Q2L4Q9 553 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 LINC00527Q9UJ94 153 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 TRBV6-1A0A0K0K1D8 114 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 IGHMP01871 453 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 SIRPDQ9H106 197 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 KCNE3Q9Y6H6 103 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 AGFG2O95081 481 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 MBD6Q96DN6 1003 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 COX6A1P12074 109 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 PFN2P35080 140 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 NUP188Q5SRE5 1749 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 LAMB4A4D0S4 1761 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 TIMM21Q9BVV7 248 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 MON2Q7Z3U7 1717 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 F8WEM9 126 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 PROP1O75360 226 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 ATP5J2P56134 94 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 ZIC1Q15915 447 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 TNXAQ16473 311 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 SMCHD1A6NHR9 2005 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 FUSP35637 526 aaKnown RBP eCLIP3.09□□□□□ -1.91
SYNE2-202ENST00000344113 NANOS3P60323 173 aaKnown RBP3.09□□□□□ -1.91
SYNE2-202ENST00000344113 SUPT4H1P63272 117 aaKnown RBP3.09□□□□□ -1.91
SYNE2-202ENST00000344113 PIANPQ8IYJ0 282 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 FBXL7Q9UJT9 491 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 A0A0D9SEW6 157 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 A8MZ25 164 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 PRR7Q8TB68 274 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 TCF19Q9Y242 345 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 SHISA8B8ZZ34 492 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 VSIG8P0DPA2 414 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 LMO2P25791 158 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 TMEM14EPQ6UXP3 125 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 CXorf67Q86X51 503 aaPredicted RBP3.09□□□□□ -1.91
SYNE2-202ENST00000344113 FANCD2OSQ96PS1 177 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 DSCAML1Q8TD84 2053 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 ELANEP08246 267 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 VWC2Q2TAL6 325 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 VPREB3Q9UKI3 123 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 TMSB15BA0A087X1C1 80 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 LINC00114Q6XXX2 140 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 TRPT1Q86TN4 253 aaKnown RBP3.09□□□□□ -1.91
SYNE2-202ENST00000344113 TMEM52Q8NDY8 209 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 OSR1Q8TAX0 266 aaPredicted RBP3.09□□□□□ -1.91
SYNE2-202ENST00000344113 PILRAQ9UKJ1 303 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 SIPA1L1O43166 1804 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 CD59P13987 128 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 COX7CP15954 63 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 NDUFS7O75251 213 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 CD28P10747 220 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 FAM74A4Q5TZK3 123 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 STHQ8IWL8 128 aa3.09□□□□□ -1.91
SYNE2-202ENST00000344113 CD7P09564 240 aa3.09□□□□□ -1.92
SYNE2-202ENST00000344113 NMSQ5H8A3 153 aa3.09□□□□□ -1.92
SYNE2-202ENST00000344113 LINC00312Q9Y6C7 94 aa3.09□□□□□ -1.92
SYNE2-202ENST00000344113 HCFC1P51610 2035 aa3.09□□□□□ -1.92
SYNE2-202ENST00000344113 DDX60Q8IY21 1712 aaKnown RBP3.09□□□□□ -1.92
SYNE2-202ENST00000344113 TRAV12-3A0A0B4J271 114 aa3.09□□□□□ -1.92
SYNE2-202ENST00000344113 MBD3L4A6NDZ8 208 aaPredicted RBP3.09□□□□□ -1.92
SYNE2-202ENST00000344113 MBD3L3A6NE82 208 aaPredicted RBP3.09□□□□□ -1.92
SYNE2-202ENST00000344113 MBD3L5A6NJ08 208 aaPredicted RBP3.09□□□□□ -1.92
SYNE2-202ENST00000344113 PVRIGQ6DKI7 326 aa3.09□□□□□ -1.92
SYNE2-202ENST00000344113 DSCR4P56555 118 aaPredicted RBP3.09□□□□□ -1.92
SYNE2-202ENST00000344113 ZNRF1Q8ND25 227 aa3.09□□□□□ -1.92
SYNE2-202ENST00000344113 SCO2A0A1W2PP80 73 aa3.09□□□□□ -1.92
SYNE2-202ENST00000344113 MSGN1A6NI15 193 aa3.09□□□□□ -1.92
SYNE2-202ENST00000344113 RNASE2P10153 161 aaKnown RBP3.09□□□□□ -1.92
SYNE2-202ENST00000344113 NTF4P34130 210 aa3.09□□□□□ -1.92
SYNE2-202ENST00000344113 LINC01620Q4KN68 170 aa3.09□□□□□ -1.92
SYNE2-202ENST00000344113 FAM60AQ9NP50 221 aa3.09□□□□□ -1.92
SYNE2-202ENST00000344113 TRBV10-3A0A0K0K1G6 114 aa3.09□□□□□ -1.92
SYNE2-202ENST00000344113 CXXC4Q9H2H0 198 aa3.09□□□□□ -1.92
SYNE2-202ENST00000344113 TP53TG1Q9Y2A0 90 aa3.09□□□□□ -1.92
SYNE2-202ENST00000344113 PKD1L3Q7Z443 1732 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 C2orf70A6NJV1 201 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 F8VRH5 84 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 TMEM256Q8N2U0 113 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 RNF185Q96GF1 192 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 IGFBP4P22692 258 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 ZNF492Q9P255 531 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 WIPF3A6NGB9 483 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 ZC2HC1AQ96GY0 325 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 C20orf78Q9BR46 151 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 METTL12A8MUP2 240 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 WT1P19544 449 aaPredicted RBP3.08□□□□□ -1.92
SYNE2-202ENST00000344113 ZNF493Q6ZR52 646 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 SHISA5Q8N114 240 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 PRSS46E5RG02 174 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 P0DMU3 169 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 FAM231AP0DMU4 169 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 FAM231CP0DMU5 169 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 FGF6P10767 208 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 SUMO4Q6EEV6 95 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 OCC1Q8TAD7 63 aa3.08□□□□□ -1.92
SYNE2-202ENST00000344113 NCOA6Q14686 2063 aaPredicted RBP3.08□□□□□ -1.92
SYNE2-202ENST00000344113 DOCK2Q92608 1830 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms