RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 A8MWL6 223 aa9.55□□□□□ -0.88
RTN3-203ENST00000341307 PSG5Q15238 335 aa9.55□□□□□ -0.88
RTN3-203ENST00000341307 MIR17HGQ75NE6 70 aa9.55□□□□□ -0.88
RTN3-203ENST00000341307 WDR86Q86TI4 376 aa9.55□□□□□ -0.88
RTN3-203ENST00000341307 CXorf67Q86X51 503 aaPredicted RBP9.55□□□□□ -0.88
RTN3-203ENST00000341307 RBMXL3Q8N7X1 1067 aaKnown RBP9.55□□□□□ -0.88
RTN3-203ENST00000341307 Q8TCH9 128 aa9.55□□□□□ -0.88
RTN3-203ENST00000341307 TEX50A0A1B0GTY4 177 aa9.55□□□□□ -0.88
RTN3-203ENST00000341307 FABP5P3A8MUU1 101 aa9.55□□□□□ -0.88
RTN3-203ENST00000341307 K7EMI3 77 aa9.55□□□□□ -0.88
RTN3-203ENST00000341307 MPV17P39210 176 aa9.55□□□□□ -0.88
RTN3-203ENST00000341307 FGF12P61328 243 aa9.55□□□□□ -0.88
RTN3-203ENST00000341307 ZNF816Q0VGE8 651 aaPredicted RBP9.55□□□□□ -0.88
RTN3-203ENST00000341307 WDR31Q8NA23 367 aa9.55□□□□□ -0.88
RTN3-203ENST00000341307 TANC2Q9HCD6 1990 aa9.54□□□□□ -0.88
RTN3-203ENST00000341307 GNG3P63215 75 aa9.54□□□□□ -0.88
RTN3-203ENST00000341307 HBBP68871 147 aa9.54□□□□□ -0.88
RTN3-203ENST00000341307 ZFAND6Q6FIF0 208 aa9.54□□□□□ -0.88
RTN3-203ENST00000341307 IGFL3Q6UXB1 125 aa9.54□□□□□ -0.88
RTN3-203ENST00000341307 ZNF503Q96F45 646 aa9.54□□□□□ -0.88
RTN3-203ENST00000341307 LINC00479Q96M42 142 aa9.54□□□□□ -0.88
RTN3-203ENST00000341307 HEYLQ9NQ87 328 aaPredicted RBP9.54□□□□□ -0.88
RTN3-203ENST00000341307 NHP2Q9NX24 153 aaKnown RBP9.54□□□□□ -0.88
RTN3-203ENST00000341307 FAM208BQ5VWN6 2430 aa9.54□□□□□ -0.88
RTN3-203ENST00000341307 RP1L1Q8IWN7 2480 aaPredicted RBP9.54□□□□□ -0.88
RTN3-203ENST00000341307 INTS1Q8N201 2190 aaKnown RBP9.54□□□□□ -0.88
RTN3-203ENST00000341307 GAGE12JA6NER3 117 aa9.54□□□□□ -0.88
RTN3-203ENST00000341307 PRSS46E5RG02 174 aa9.54□□□□□ -0.88
RTN3-203ENST00000341307 NPIPB11E5RHQ5 1161 aa9.54□□□□□ -0.88
RTN3-203ENST00000341307 GAGE7O76087 117 aa9.54□□□□□ -0.88
RTN3-203ENST00000341307 GAGE12FP0CL80 117 aa9.54□□□□□ -0.88
RTN3-203ENST00000341307 GAGE12GP0CL81 117 aa9.54□□□□□ -0.88
RTN3-203ENST00000341307 GAGE12IP0CL82 117 aa9.54□□□□□ -0.88
RTN3-203ENST00000341307 GAGE4Q13068 117 aa9.54□□□□□ -0.88
RTN3-203ENST00000341307 Q6ZS92 163 aa9.54□□□□□ -0.88
RTN3-203ENST00000341307 MKXQ8IYA7 352 aa9.54□□□□□ -0.88
RTN3-203ENST00000341307 TMEM133Q9H2Q1 129 aa9.54□□□□□ -0.88
RTN3-203ENST00000341307 POLDIP2Q9Y2S7 368 aa9.54□□□□□ -0.88
RTN3-203ENST00000341307 FAM90A9PA6NNJ1 464 aa9.53□□□□□ -0.88
RTN3-203ENST00000341307 ABHD12Q8N2K0 398 aa9.53□□□□□ -0.88
RTN3-203ENST00000341307 FAM215AQ9Y5M1 114 aa9.53□□□□□ -0.88
RTN3-203ENST00000341307 TRBV6-6A0A0A6YYG2 114 aa9.53□□□□□ -0.88
RTN3-203ENST00000341307 TCRBV4S1A1TA0A5B7 111 aa9.53□□□□□ -0.88
RTN3-203ENST00000341307 CHEK1O14757 476 aa9.53□□□□□ -0.88
RTN3-203ENST00000341307 NMUP48645 174 aa9.53□□□□□ -0.88
RTN3-203ENST00000341307 SMCPP49901 116 aaPredicted RBP9.53□□□□□ -0.88
RTN3-203ENST00000341307 BRWD1-AS2P59051 145 aa9.53□□□□□ -0.88
RTN3-203ENST00000341307 RPL30P62888 115 aaKnown RBP9.53□□□□□ -0.88
RTN3-203ENST00000341307 USF3Q68DE3 2245 aa9.53□□□□□ -0.88
RTN3-203ENST00000341307 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.53□□□□□ -0.88
RTN3-203ENST00000341307 ATP6V0E2Q8NHE4 81 aa9.53□□□□□ -0.88
RTN3-203ENST00000341307 UBALD1Q8TB05 177 aa9.53□□□□□ -0.88
RTN3-203ENST00000341307 LSM4Q9Y4Z0 139 aaKnown RBP9.53□□□□□ -0.88
RTN3-203ENST00000341307 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.52□□□□□ -0.88
RTN3-203ENST00000341307 IGKV3-15P01624 115 aa9.52□□□□□ -0.88
RTN3-203ENST00000341307 RBP4P02753 201 aa9.52□□□□□ -0.88
RTN3-203ENST00000341307 GRPP07492 148 aa9.52□□□□□ -0.88
RTN3-203ENST00000341307 CSN3P07498 182 aa9.52□□□□□ -0.88
RTN3-203ENST00000341307 CECR9P0C854 216 aa9.52□□□□□ -0.88
RTN3-203ENST00000341307 TEX29Q8N6K0 151 aa9.52□□□□□ -0.88
RTN3-203ENST00000341307 KLF14Q8TD94 323 aaPredicted RBP9.52□□□□□ -0.88
RTN3-203ENST00000341307 PROCRQ9UNN8 238 aa9.52□□□□□ -0.88
RTN3-203ENST00000341307 ZNF462Q96JM2 2506 aa9.52□□□□□ -0.88
RTN3-203ENST00000341307 ACTL6BO94805 426 aa9.52□□□□□ -0.89
RTN3-203ENST00000341307 PRRG2O14669 202 aa9.51□□□□□ -0.89
RTN3-203ENST00000341307 LTAP01374 205 aa9.51□□□□□ -0.89
RTN3-203ENST00000341307 C7orf69Q9H7B7 122 aa9.51□□□□□ -0.89
RTN3-203ENST00000341307 TMEM167BQ9NRX6 74 aa9.51□□□□□ -0.89
RTN3-203ENST00000341307 SLC25A10Q9UBX3 287 aaPredicted RBP9.51□□□□□ -0.89
RTN3-203ENST00000341307 HCFC1P51610 2035 aa9.51□□□□□ -0.89
RTN3-203ENST00000341307 A0A096LNJ9 63 aa9.51□□□□□ -0.89
RTN3-203ENST00000341307 TRAV24A0A0B4J272 114 aa9.51□□□□□ -0.89
RTN3-203ENST00000341307 B9A039 149 aa9.51□□□□□ -0.89
RTN3-203ENST00000341307 NPIPB6E9PJ23 425 aa9.51□□□□□ -0.89
RTN3-203ENST00000341307 THBDP07204 575 aa9.51□□□□□ -0.89
RTN3-203ENST00000341307 ZNF137PP52743 207 aa9.51□□□□□ -0.89
RTN3-203ENST00000341307 LGALS9BQ3B8N2 356 aa9.51□□□□□ -0.89
RTN3-203ENST00000341307 LGALS9CQ6DKI2 356 aa9.51□□□□□ -0.89
RTN3-203ENST00000341307 ZNF826PQ6ZT77 177 aa9.51□□□□□ -0.89
RTN3-203ENST00000341307 MOGAT3Q86VF5 341 aa9.51□□□□□ -0.89
RTN3-203ENST00000341307 OR8A1Q8NGG7 326 aa9.51□□□□□ -0.89
RTN3-203ENST00000341307 KIR2DL4Q99706 377 aa9.51□□□□□ -0.89
RTN3-203ENST00000341307 OBP2BQ9NPH6 170 aa9.51□□□□□ -0.89
RTN3-203ENST00000341307 MBD3L4A6NDZ8 208 aaPredicted RBP9.5□□□□□ -0.89
RTN3-203ENST00000341307 MBD3L3A6NE82 208 aaPredicted RBP9.5□□□□□ -0.89
RTN3-203ENST00000341307 MBD3L5A6NJ08 208 aaPredicted RBP9.5□□□□□ -0.89
RTN3-203ENST00000341307 TFF1P04155 84 aa9.5□□□□□ -0.89
RTN3-203ENST00000341307 MBD3L2Q8NHZ7 208 aaPredicted RBP9.5□□□□□ -0.89
RTN3-203ENST00000341307 RTL8AQ9BWD3 113 aa9.5□□□□□ -0.89
RTN3-203ENST00000341307 HIGD1BQ9P298 99 aa9.5□□□□□ -0.89
RTN3-203ENST00000341307 IGHV1-18A0A0C4DH31 117 aa9.5□□□□□ -0.89
RTN3-203ENST00000341307 C17orf98A8MV24 154 aa9.5□□□□□ -0.89
RTN3-203ENST00000341307 CT45A10P0DMU9 189 aa9.5□□□□□ -0.89
RTN3-203ENST00000341307 NDUFV3P56181 108 aaKnown RBP9.5□□□□□ -0.89
RTN3-203ENST00000341307 CACNG7P62955 275 aa9.5□□□□□ -0.89
RTN3-203ENST00000341307 ZNF474Q6S9Z5 364 aaPredicted RBP9.5□□□□□ -0.89
RTN3-203ENST00000341307 CHAC1Q9BUX1 264 aa9.5□□□□□ -0.89
RTN3-203ENST00000341307 CACNA1DQ01668 2161 aa9.5□□□□□ -0.89
RTN3-203ENST00000341307 TRAV5A0A0B4J249 113 aa9.49□□□□□ -0.89
RTN3-203ENST00000341307 J3QT63 122 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms