RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 PHLDA1Q8WV24 401 aaPredicted RBP12.31□□□□□ -0.44
LIMK2-203ENST00000340552 PAXXQ9BUH6 204 aa12.31□□□□□ -0.44
LIMK2-203ENST00000340552 MLST8Q9BVC4 326 aa12.31□□□□□ -0.44
LIMK2-203ENST00000340552 MRPL32Q9BYC8 188 aaKnown RBP12.31□□□□□ -0.44
LIMK2-203ENST00000340552 TMEM14BQ9NUH8 114 aa12.31□□□□□ -0.44
LIMK2-203ENST00000340552 KBTBD11-OT1A0A1B0GTJ5 212 aa12.31□□□□□ -0.44
LIMK2-203ENST00000340552 SRRM4A7MD48 611 aaKnown RBP12.31□□□□□ -0.44
LIMK2-203ENST00000340552 F8W1H4 67 aa12.31□□□□□ -0.44
LIMK2-203ENST00000340552 PRRG2O14669 202 aa12.31□□□□□ -0.44
LIMK2-203ENST00000340552 MOSP00540 346 aa12.31□□□□□ -0.44
LIMK2-203ENST00000340552 P01737 135 aa12.31□□□□□ -0.44
LIMK2-203ENST00000340552 CACNG7P62955 275 aa12.31□□□□□ -0.44
LIMK2-203ENST00000340552 FAM169BQ8N8A8 192 aa12.31□□□□□ -0.44
LIMK2-203ENST00000340552 S1PR3Q99500 378 aa12.31□□□□□ -0.44
LIMK2-203ENST00000340552 A0A1W2PRD5 423 aa12.3□□□□□ -0.44
LIMK2-203ENST00000340552 A0A1W2PRF3 423 aa12.3□□□□□ -0.44
LIMK2-203ENST00000340552 A0A1W2PRM7 423 aa12.3□□□□□ -0.44
LIMK2-203ENST00000340552 C19orf71A6NCJ1 209 aa12.3□□□□□ -0.44
LIMK2-203ENST00000340552 GATA3P23771 443 aa12.3□□□□□ -0.44
LIMK2-203ENST00000340552 ZNF826PQ6ZT77 177 aa12.3□□□□□ -0.44
LIMK2-203ENST00000340552 ITLN1Q8WWA0 313 aa12.3□□□□□ -0.44
LIMK2-203ENST00000340552 FOXA2Q9Y261 457 aaPredicted RBP12.3□□□□□ -0.44
LIMK2-203ENST00000340552 C15orf65H3BRN8 121 aa12.3□□□□□ -0.44
LIMK2-203ENST00000340552 TIMM8AO60220 97 aaPredicted RBP12.3□□□□□ -0.44
LIMK2-203ENST00000340552 TSPAN13O95857 204 aa12.3□□□□□ -0.44
LIMK2-203ENST00000340552 LGALS9BQ3B8N2 356 aa12.3□□□□□ -0.44
LIMK2-203ENST00000340552 CT83Q5H943 113 aa12.3□□□□□ -0.44
LIMK2-203ENST00000340552 LGALS9CQ6DKI2 356 aa12.3□□□□□ -0.44
LIMK2-203ENST00000340552 C1orf229Q6ZS94 237 aaPredicted RBP12.3□□□□□ -0.44
LIMK2-203ENST00000340552 BCL6BQ8N143 479 aaPredicted RBP12.3□□□□□ -0.44
LIMK2-203ENST00000340552 GPR82Q96P67 336 aa12.3□□□□□ -0.44
LIMK2-203ENST00000340552 MRPL16Q9NX20 251 aaKnown RBP12.3□□□□□ -0.44
LIMK2-203ENST00000340552 SPTBN4Q9H254 2564 aa12.29□□□□□ -0.44
LIMK2-203ENST00000340552 PCNX1Q96RV3 2341 aa12.29□□□□□ -0.44
LIMK2-203ENST00000340552 GFRALQ6UXV0 394 aa12.29□□□□□ -0.44
LIMK2-203ENST00000340552 PRSS3P2Q8NHM4 247 aa12.29□□□□□ -0.44
LIMK2-203ENST00000340552 FXYD5Q96DB9 178 aa12.29□□□□□ -0.44
LIMK2-203ENST00000340552 EPDR1Q9UM22 224 aa12.29□□□□□ -0.44
LIMK2-203ENST00000340552 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.29□□□□□ -0.44
LIMK2-203ENST00000340552 M0R1B8 84 aa12.29□□□□□ -0.44
LIMK2-203ENST00000340552 MYCNOSP40205 109 aa12.29□□□□□ -0.44
LIMK2-203ENST00000340552 MTURNQ8N3F0 131 aa12.29□□□□□ -0.44
LIMK2-203ENST00000340552 H3BMG7 143 aa12.28□□□□□ -0.44
LIMK2-203ENST00000340552 SLC25A5P05141 298 aaKnown RBP12.28□□□□□ -0.44
LIMK2-203ENST00000340552 ZNF134P52741 427 aa12.28□□□□□ -0.44
LIMK2-203ENST00000340552 GFRA4Q9GZZ7 299 aa12.28□□□□□ -0.44
LIMK2-203ENST00000340552 SIGLEC8Q9NYZ4 499 aa12.28□□□□□ -0.44
LIMK2-203ENST00000340552 GNG12Q9UBI6 72 aa12.28□□□□□ -0.44
LIMK2-203ENST00000340552 IGF2RP11717 2491 aa12.28□□□□□ -0.44
LIMK2-203ENST00000340552 K7EMI3 77 aa12.28□□□□□ -0.44
LIMK2-203ENST00000340552 OVOL3O00110 214 aa12.28□□□□□ -0.44
LIMK2-203ENST00000340552 HAX1O00165 279 aa12.28□□□□□ -0.44
LIMK2-203ENST00000340552 SPINT2O43291 252 aa12.28□□□□□ -0.44
LIMK2-203ENST00000340552 SSBP2P81877 361 aaPredicted RBP12.28□□□□□ -0.44
LIMK2-203ENST00000340552 FAM27E3Q08E93 113 aa12.28□□□□□ -0.44
LIMK2-203ENST00000340552 MBNL2Q5VZF2 373 aaKnown RBP12.28□□□□□ -0.44
LIMK2-203ENST00000340552 TLN1Q9Y490 2541 aaKnown RBP12.27□□□□□ -0.44
LIMK2-203ENST00000340552 IFI27P40305 119 aaPredicted RBP12.27□□□□□ -0.44
LIMK2-203ENST00000340552 PRR30Q53SZ7 412 aaPredicted RBP12.27□□□□□ -0.44
LIMK2-203ENST00000340552 DDB2Q92466 427 aa12.27□□□□□ -0.44
LIMK2-203ENST00000340552 C20orf78Q9BR46 151 aa12.27□□□□□ -0.44
LIMK2-203ENST00000340552 CXXC4Q9H2H0 198 aa12.27□□□□□ -0.44
LIMK2-203ENST00000340552 KLF12Q9Y4X4 402 aa12.27□□□□□ -0.44
LIMK2-203ENST00000340552 A0A0G2JNJ9 132 aa12.27□□□□□ -0.45
LIMK2-203ENST00000340552 FXYD7P58549 80 aa12.27□□□□□ -0.45
LIMK2-203ENST00000340552 PATE2Q6UY27 113 aa12.27□□□□□ -0.45
LIMK2-203ENST00000340552 FAM90A1Q86YD7 464 aa12.27□□□□□ -0.45
LIMK2-203ENST00000340552 ZNF492Q9P255 531 aa12.27□□□□□ -0.45
LIMK2-203ENST00000340552 Q9UFV3 132 aa12.27□□□□□ -0.45
LIMK2-203ENST00000340552 RAXQ9Y2V3 346 aa12.27□□□□□ -0.45
LIMK2-203ENST00000340552 E9PLD3 99 aa12.26□□□□□ -0.45
LIMK2-203ENST00000340552 PLAUP00749 431 aa12.26□□□□□ -0.45
LIMK2-203ENST00000340552 LTAP01374 205 aa12.26□□□□□ -0.45
LIMK2-203ENST00000340552 EDDM3AQ14507 147 aa12.26□□□□□ -0.45
LIMK2-203ENST00000340552 TTTY13Q9BZ97 58 aa12.26□□□□□ -0.45
LIMK2-203ENST00000340552 IFI27L2Q9H2X8 130 aa12.26□□□□□ -0.45
LIMK2-203ENST00000340552 NHP2Q9NX24 153 aaKnown RBP12.26□□□□□ -0.45
LIMK2-203ENST00000340552 SS18L2Q9UHA2 77 aa12.26□□□□□ -0.45
LIMK2-203ENST00000340552 TCRBV4S1A1TA0A5B7 111 aa12.26□□□□□ -0.45
LIMK2-203ENST00000340552 COX7A2P2O60397 106 aa12.26□□□□□ -0.45
LIMK2-203ENST00000340552 UTF1Q5T230 341 aa12.26□□□□□ -0.45
LIMK2-203ENST00000340552 ZNF418Q8TF45 676 aaPredicted RBP12.26□□□□□ -0.45
LIMK2-203ENST00000340552 PGPA6NDG6 321 aa12.25□□□□□ -0.45
LIMK2-203ENST00000340552 C8orf86Q6ZUL3 223 aa12.25□□□□□ -0.45
LIMK2-203ENST00000340552 Q71RC1 249 aaPredicted RBP12.25□□□□□ -0.45
LIMK2-203ENST00000340552 C11orf53Q8IXP5 236 aa12.25□□□□□ -0.45
LIMK2-203ENST00000340552 DAZAP1Q96EP5 407 aaKnown RBP12.25□□□□□ -0.45
LIMK2-203ENST00000340552 PGPEP1Q9NXJ5 209 aa12.25□□□□□ -0.45
LIMK2-203ENST00000340552 ICE1Q9Y2F5 2266 aa12.25□□□□□ -0.45
LIMK2-203ENST00000340552 C16orf97H3BN30 126 aa12.25□□□□□ -0.45
LIMK2-203ENST00000340552 MSMPQ1L6U9 139 aa12.25□□□□□ -0.45
LIMK2-203ENST00000340552 C10orf113Q5VZT2 155 aa12.25□□□□□ -0.45
LIMK2-203ENST00000340552 AMTNQ6UX39 209 aa12.25□□□□□ -0.45
LIMK2-203ENST00000340552 AGRNO00468 2067 aa12.25□□□□□ -0.45
LIMK2-203ENST00000340552 NPIPB6E9PJ23 425 aa12.24□□□□□ -0.45
LIMK2-203ENST00000340552 SLC25A17O43808 307 aa12.24□□□□□ -0.45
LIMK2-203ENST00000340552 FSTL3O95633 263 aa12.24□□□□□ -0.45
LIMK2-203ENST00000340552 CT45A6P0DMU7 189 aa12.24□□□□□ -0.45
LIMK2-203ENST00000340552 CT45A5P0DMU8 189 aa12.24□□□□□ -0.45
LIMK2-203ENST00000340552 CT45A7P0DMV0 189 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms