RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 NABP1Q96AH0 204 aa6.56□□□□□ -1.36
CIITA-201ENST00000324288 IGKV1D-43A0A0B4J1Z2 117 aa6.56□□□□□ -1.36
CIITA-201ENST00000324288 C5orf67F2Z3F1 127 aa6.56□□□□□ -1.36
CIITA-201ENST00000324288 RHOGP84095 191 aa6.56□□□□□ -1.36
CIITA-201ENST00000324288 OSTCQ9NRP0 149 aa6.56□□□□□ -1.36
CIITA-201ENST00000324288 TM2D1Q9BX74 207 aa6.56□□□□□ -1.36
CIITA-201ENST00000324288 SNHG12Q9BXW3 62 aa6.56□□□□□ -1.36
CIITA-201ENST00000324288 A0A0A6YYD4 124 aa6.55□□□□□ -1.36
CIITA-201ENST00000324288 SRSF7Q16629 238 aaKnown RBP eCLIP6.55□□□□□ -1.36
CIITA-201ENST00000324288 DEFB121Q5J5C9 76 aa6.55□□□□□ -1.36
CIITA-201ENST00000324288 SUMO4Q6EEV6 95 aa6.55□□□□□ -1.36
CIITA-201ENST00000324288 Q6ZT83 130 aa6.55□□□□□ -1.36
CIITA-201ENST00000324288 PLPPR1Q8TBJ4 325 aa6.55□□□□□ -1.36
CIITA-201ENST00000324288 FABP5P3A8MUU1 101 aa6.55□□□□□ -1.36
CIITA-201ENST00000324288 ADARB2-AS1A8MUL3 147 aa6.55□□□□□ -1.36
CIITA-201ENST00000324288 TRAV13-1A0A0B4J241 112 aa6.55□□□□□ -1.36
CIITA-201ENST00000324288 POLR3KQ9Y2Y1 108 aaPredicted RBP6.55□□□□□ -1.36
CIITA-201ENST00000324288 LYZL4Q96KX0 146 aa6.55□□□□□ -1.36
CIITA-201ENST00000324288 ZNF114Q8NC26 417 aa6.55□□□□□ -1.36
CIITA-201ENST00000324288 Q8TAT8 98 aa6.55□□□□□ -1.36
CIITA-201ENST00000324288 IGHV1-2P23083 117 aa6.55□□□□□ -1.36
CIITA-201ENST00000324288 LY6DQ14210 128 aa6.55□□□□□ -1.36
CIITA-201ENST00000324288 TMEM144Q7Z5S9 345 aa6.55□□□□□ -1.36
CIITA-201ENST00000324288 C9orf106Q8NAJ2 232 aa6.55□□□□□ -1.36
CIITA-201ENST00000324288 GGTLC1Q9BX51 225 aa6.55□□□□□ -1.36
CIITA-201ENST00000324288 NBR2O15453 112 aa6.54□□□□□ -1.36
CIITA-201ENST00000324288 SAP30O75446 220 aa6.54□□□□□ -1.36
CIITA-201ENST00000324288 IGHMP01871 453 aa6.54□□□□□ -1.36
CIITA-201ENST00000324288 PLEKHB2Q96CS7 222 aa6.54□□□□□ -1.36
CIITA-201ENST00000324288 GFI1Q99684 422 aa6.54□□□□□ -1.36
CIITA-201ENST00000324288 PEMTQ9UBM1 199 aa6.54□□□□□ -1.36
CIITA-201ENST00000324288 NUP35Q8NFH5 326 aa6.54□□□□□ -1.36
CIITA-201ENST00000324288 PRADC1Q9BSG0 188 aa6.54□□□□□ -1.36
CIITA-201ENST00000324288 LRRK2Q5S007 2527 aa6.54□□□□□ -1.36
CIITA-201ENST00000324288 KIF26AQ9ULI4 1882 aaPredicted RBP6.54□□□□□ -1.36
CIITA-201ENST00000324288 EFNB3Q15768 340 aa6.54□□□□□ -1.36
CIITA-201ENST00000324288 JMJD1CQ15652 2540 aa6.54□□□□□ -1.36
CIITA-201ENST00000324288 SYS1-DBNDD2H3BUS1 97 aa6.54□□□□□ -1.36
CIITA-201ENST00000324288 KLRD1Q13241 179 aa6.54□□□□□ -1.36
CIITA-201ENST00000324288 KLF17Q5JT82 389 aaPredicted RBP6.54□□□□□ -1.36
CIITA-201ENST00000324288 UPK2O00526 184 aa6.54□□□□□ -1.36
CIITA-201ENST00000324288 PSCAO43653 123 aa6.54□□□□□ -1.36
CIITA-201ENST00000324288 TRACP01848 142 aa6.54□□□□□ -1.36
CIITA-201ENST00000324288 CD5P06127 495 aa6.54□□□□□ -1.36
CIITA-201ENST00000324288 NRN1LQ496H8 165 aa6.54□□□□□ -1.36
CIITA-201ENST00000324288 CACNG8Q8WXS5 425 aa6.54□□□□□ -1.36
CIITA-201ENST00000324288 KLF12Q9Y4X4 402 aa6.54□□□□□ -1.36
CIITA-201ENST00000324288 BOD1L2Q8IYS8 172 aa6.54□□□□□ -1.36
CIITA-201ENST00000324288 ZIC4Q8N9L1 334 aa6.54□□□□□ -1.36
CIITA-201ENST00000324288 CHCHD2Q9Y6H1 151 aaPredicted RBP6.54□□□□□ -1.36
CIITA-201ENST00000324288 VWC2LB2RUY7 222 aa6.54□□□□□ -1.36
CIITA-201ENST00000324288 MYOD1P15172 320 aa6.54□□□□□ -1.36
CIITA-201ENST00000324288 TRAV40A0A0B4J280 105 aa6.53□□□□□ -1.36
CIITA-201ENST00000324288 NDPQ00604 133 aa6.53□□□□□ -1.36
CIITA-201ENST00000324288 LYZL1Q6UWQ5 148 aa6.53□□□□□ -1.36
CIITA-201ENST00000324288 Q6ZVH6 145 aa6.53□□□□□ -1.36
CIITA-201ENST00000324288 RNF125Q96EQ8 232 aa6.53□□□□□ -1.36
CIITA-201ENST00000324288 GAGE1Q13065 139 aa6.53□□□□□ -1.36
CIITA-201ENST00000324288 A0A087WWL8 130 aa6.53□□□□□ -1.36
CIITA-201ENST00000324288 FGF16O43320 207 aa6.53□□□□□ -1.36
CIITA-201ENST00000324288 SELLP14151 372 aa6.53□□□□□ -1.36
CIITA-201ENST00000324288 ZC2HC1BQ5TFG8 222 aa6.53□□□□□ -1.36
CIITA-201ENST00000324288 GNB1LQ9BYB4 327 aa6.53□□□□□ -1.36
CIITA-201ENST00000324288 NEUROG3Q9Y4Z2 214 aa6.53□□□□□ -1.36
CIITA-201ENST00000324288 IGFBP3P17936 291 aaPredicted RBP6.53□□□□□ -1.36
CIITA-201ENST00000324288 OSR1Q8TAX0 266 aaPredicted RBP6.53□□□□□ -1.36
CIITA-201ENST00000324288 TRGV1A0A0A0MS02 117 aa6.53□□□□□ -1.36
CIITA-201ENST00000324288 CSTL1Q9H114 145 aa6.53□□□□□ -1.36
CIITA-201ENST00000324288 PSG7Q13046 419 aa6.53□□□□□ -1.36
CIITA-201ENST00000324288 Q6AWC8 147 aa6.53□□□□□ -1.36
CIITA-201ENST00000324288 TMEM86BQ8N661 226 aa6.53□□□□□ -1.36
CIITA-201ENST00000324288 CHAC1Q9BUX1 264 aa6.53□□□□□ -1.36
CIITA-201ENST00000324288 COX5BP10606 129 aa6.53□□□□□ -1.36
CIITA-201ENST00000324288 TMEM126AQ9H061 195 aa6.53□□□□□ -1.36
CIITA-201ENST00000324288 C10orf55Q5SWW7 151 aa6.52□□□□□ -1.36
CIITA-201ENST00000324288 ORMDL2Q53FV1 153 aa6.52□□□□□ -1.37
CIITA-201ENST00000324288 TMEM158Q8WZ71 300 aa6.52□□□□□ -1.37
CIITA-201ENST00000324288 WIPF3A6NGB9 483 aa6.52□□□□□ -1.37
CIITA-201ENST00000324288 TMEM238C9JI98 176 aa6.52□□□□□ -1.37
CIITA-201ENST00000324288 C5orf47Q569G3 176 aa6.52□□□□□ -1.37
CIITA-201ENST00000324288 C14orf178Q8N769 122 aaPredicted RBP6.52□□□□□ -1.37
CIITA-201ENST00000324288 CLPSL1A2RUU4 121 aa6.52□□□□□ -1.37
CIITA-201ENST00000324288 MORN3Q6PF18 240 aaPredicted RBP6.52□□□□□ -1.37
CIITA-201ENST00000324288 SIGLEC15Q6ZMC9 328 aa6.52□□□□□ -1.37
CIITA-201ENST00000324288 FGFBP3Q8TAT2 258 aa6.52□□□□□ -1.37
CIITA-201ENST00000324288 PPDPFLQ8WWR9 84 aa6.52□□□□□ -1.37
CIITA-201ENST00000324288 C1orf159Q96HA4 380 aa6.52□□□□□ -1.37
CIITA-201ENST00000324288 ANAPC10Q9UM13 185 aa6.52□□□□□ -1.37
CIITA-201ENST00000324288 TRAV3A0A0B4J244 114 aa6.52□□□□□ -1.37
CIITA-201ENST00000324288 UBE2E2Q96LR5 201 aa6.52□□□□□ -1.37
CIITA-201ENST00000324288 C1orf43Q9BWL3 253 aa6.52□□□□□ -1.37
CIITA-201ENST00000324288 C1orf53Q5VUE5 145 aa6.52□□□□□ -1.37
CIITA-201ENST00000324288 C3orf56Q8N813 242 aa6.52□□□□□ -1.37
CIITA-201ENST00000324288 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.52□□□□□ -1.37
CIITA-201ENST00000324288 ADCYAP1P18509 176 aa6.52□□□□□ -1.37
CIITA-201ENST00000324288 ASPHD1Q5U4P2 390 aa6.52□□□□□ -1.37
CIITA-201ENST00000324288 TM4SF5O14894 197 aa6.52□□□□□ -1.37
CIITA-201ENST00000324288 AZU1P20160 251 aa6.52□□□□□ -1.37
CIITA-201ENST00000324288 ATP5IP56385 69 aaPredicted RBP6.52□□□□□ -1.37
CIITA-201ENST00000324288 RBM3P98179 157 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms