RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 A0A087X0K7 114 aa13.73□□□□□ -0.21
SCAMP4-201ENST00000316097 E7EUB6 86 aa13.73□□□□□ -0.21
SCAMP4-201ENST00000316097 TOX4O94842 621 aa13.73□□□□□ -0.21
SCAMP4-201ENST00000316097 MOSP00540 346 aa13.73□□□□□ -0.21
SCAMP4-201ENST00000316097 LINC00305Q7Z4B0 112 aa13.73□□□□□ -0.21
SCAMP4-201ENST00000316097 PDPNQ86YL7 162 aa13.73□□□□□ -0.21
SCAMP4-201ENST00000316097 FNDC4Q9H6D8 234 aaPredicted RBP13.73□□□□□ -0.21
SCAMP4-201ENST00000316097 SCRT2Q9NQ03 307 aa13.73□□□□□ -0.21
SCAMP4-201ENST00000316097 PGPA6NDG6 321 aa13.72□□□□□ -0.21
SCAMP4-201ENST00000316097 TMEM8BA6NDV4 472 aa13.72□□□□□ -0.21
SCAMP4-201ENST00000316097 PMCHL2Q9BQD1 86 aa13.72□□□□□ -0.21
SCAMP4-201ENST00000316097 NDUFB3O43676 98 aa13.72□□□□□ -0.21
SCAMP4-201ENST00000316097 RPS20P60866 119 aaKnown RBP13.72□□□□□ -0.21
SCAMP4-201ENST00000316097 PSG9Q00887 426 aa13.72□□□□□ -0.21
SCAMP4-201ENST00000316097 SMIM15Q7Z3B0 74 aa13.72□□□□□ -0.21
SCAMP4-201ENST00000316097 HARBI1Q96MB7 349 aa13.72□□□□□ -0.21
SCAMP4-201ENST00000316097 GPR82Q96P67 336 aa13.72□□□□□ -0.21
SCAMP4-201ENST00000316097 MAP1LC3CQ9BXW4 147 aa13.72□□□□□ -0.21
SCAMP4-201ENST00000316097 NDUFA4L2Q9NRX3 87 aa13.72□□□□□ -0.21
SCAMP4-201ENST00000316097 LOC102724200A0A096LPH7 203 aaPredicted RBP13.71□□□□□ -0.21
SCAMP4-201ENST00000316097 hADV38S2A0JD32 116 aa13.71□□□□□ -0.21
SCAMP4-201ENST00000316097 A8MWL6 223 aa13.71□□□□□ -0.21
SCAMP4-201ENST00000316097 P01737 135 aa13.71□□□□□ -0.21
SCAMP4-201ENST00000316097 MYCNOSP40205 109 aa13.71□□□□□ -0.21
SCAMP4-201ENST00000316097 TMEM177Q53S58 311 aa13.71□□□□□ -0.21
SCAMP4-201ENST00000316097 TCRBV4S1A1TA0A5B7 111 aa13.71□□□□□ -0.22
SCAMP4-201ENST00000316097 FSTL3O95633 263 aa13.71□□□□□ -0.22
SCAMP4-201ENST00000316097 REG1BP48304 166 aa13.71□□□□□ -0.22
SCAMP4-201ENST00000316097 IGKV1D-37A0A075B6S9 117 aa13.7□□□□□ -0.22
SCAMP4-201ENST00000316097 LIPFP07098 398 aa13.7□□□□□ -0.22
SCAMP4-201ENST00000316097 MRPL36Q9P0J6 103 aaKnown RBP13.7□□□□□ -0.22
SCAMP4-201ENST00000316097 VPS13CQ709C8 3753 aa13.7□□□□□ -0.22
SCAMP4-201ENST00000316097 TANC2Q9HCD6 1990 aa13.7□□□□□ -0.22
SCAMP4-201ENST00000316097 CHEK1O14757 476 aa13.7□□□□□ -0.22
SCAMP4-201ENST00000316097 NDUFS7O75251 213 aa13.7□□□□□ -0.22
SCAMP4-201ENST00000316097 ORM2P19652 201 aa13.7□□□□□ -0.22
SCAMP4-201ENST00000316097 C10orf55Q5SWW7 151 aa13.7□□□□□ -0.22
SCAMP4-201ENST00000316097 SLC25A48Q6ZT89 311 aaKnown RBP13.7□□□□□ -0.22
SCAMP4-201ENST00000316097 MLST8Q9BVC4 326 aa13.7□□□□□ -0.22
SCAMP4-201ENST00000316097 EPG5Q9HCE0 2579 aa13.7□□□□□ -0.22
SCAMP4-201ENST00000316097 TRAV8-6A0A0B4J262 113 aa13.69□□□□□ -0.22
SCAMP4-201ENST00000316097 ZC2HC1AQ96GY0 325 aa13.69□□□□□ -0.22
SCAMP4-201ENST00000316097 MRPL20Q9BYC9 149 aaKnown RBP13.69□□□□□ -0.22
SCAMP4-201ENST00000316097 LINC00312Q9Y6C7 94 aa13.69□□□□□ -0.22
SCAMP4-201ENST00000316097 H3BTX0 84 aa13.69□□□□□ -0.22
SCAMP4-201ENST00000316097 CD5LO43866 347 aa13.69□□□□□ -0.22
SCAMP4-201ENST00000316097 CSN3P07498 182 aa13.69□□□□□ -0.22
SCAMP4-201ENST00000316097 HIST1H1AQ02539 215 aaPredicted RBP13.69□□□□□ -0.22
SCAMP4-201ENST00000316097 WT1-ASQ06250 92 aa13.69□□□□□ -0.22
SCAMP4-201ENST00000316097 PRSS22Q9GZN4 317 aa13.69□□□□□ -0.22
SCAMP4-201ENST00000316097 NAV3Q8IVL0 2385 aa13.69□□□□□ -0.22
SCAMP4-201ENST00000316097 GAGE12BA1L429 117 aa13.68□□□□□ -0.22
SCAMP4-201ENST00000316097 PET117Q6UWS5 81 aa13.68□□□□□ -0.22
SCAMP4-201ENST00000316097 NCOR1P1Q9H4R4 102 aa13.68□□□□□ -0.22
SCAMP4-201ENST00000316097 RPUSD1Q9UJJ7 312 aaKnown RBP13.68□□□□□ -0.22
SCAMP4-201ENST00000316097 KLF12Q9Y4X4 402 aa13.68□□□□□ -0.22
SCAMP4-201ENST00000316097 SOX21Q9Y651 276 aaPredicted RBP13.68□□□□□ -0.22
SCAMP4-201ENST00000316097 MALRD1Q5VYJ5 2156 aa13.68□□□□□ -0.22
SCAMP4-201ENST00000316097 SNAI2O43623 268 aa13.68□□□□□ -0.22
SCAMP4-201ENST00000316097 S100A7P31151 101 aa13.68□□□□□ -0.22
SCAMP4-201ENST00000316097 RBPMS2Q6ZRY4 209 aaKnown RBP13.68□□□□□ -0.22
SCAMP4-201ENST00000316097 OR1B1Q8NGR6 318 aa13.68□□□□□ -0.22
SCAMP4-201ENST00000316097 DAZAP1Q96EP5 407 aaKnown RBP13.68□□□□□ -0.22
SCAMP4-201ENST00000316097 BBC3Q96PG8 261 aaPredicted RBP13.68□□□□□ -0.22
SCAMP4-201ENST00000316097 HLA-DRB1P01911 266 aa13.67□□□□□ -0.22
SCAMP4-201ENST00000316097 OR5AL1P0C617 328 aa13.67□□□□□ -0.22
SCAMP4-201ENST00000316097 FOXE3Q13461 319 aa13.67□□□□□ -0.22
SCAMP4-201ENST00000316097 DIAPH2-AS1Q14236 149 aa13.67□□□□□ -0.22
SCAMP4-201ENST00000316097 SMIM12Q96EX1 92 aa13.67□□□□□ -0.22
SCAMP4-201ENST00000316097 C19orf71A6NCJ1 209 aa13.67□□□□□ -0.22
SCAMP4-201ENST00000316097 APOA2P02652 100 aa13.67□□□□□ -0.22
SCAMP4-201ENST00000316097 GPR183P32249 361 aa13.67□□□□□ -0.22
SCAMP4-201ENST00000316097 OSR1Q8TAX0 266 aaPredicted RBP13.67□□□□□ -0.22
SCAMP4-201ENST00000316097 TMUB1Q9BVT8 246 aa13.67□□□□□ -0.22
SCAMP4-201ENST00000316097 MS4A6AQ9H2W1 248 aa13.67□□□□□ -0.22
SCAMP4-201ENST00000316097 UBTD1Q9HAC8 227 aa13.67□□□□□ -0.22
SCAMP4-201ENST00000316097 CRYBG3Q68DQ2 2970 aa13.67□□□□□ -0.22
SCAMP4-201ENST00000316097 NBEAP1P0C6P0 100 aa13.67□□□□□ -0.22
SCAMP4-201ENST00000316097 CT83Q5H943 113 aa13.67□□□□□ -0.22
SCAMP4-201ENST00000316097 PERPQ96FX8 193 aa13.67□□□□□ -0.22
SCAMP4-201ENST00000316097 PEF1Q9UBV8 284 aaKnown RBP13.67□□□□□ -0.22
SCAMP4-201ENST00000316097 USP9XQ93008 2570 aaPredicted RBP13.66□□□□□ -0.22
SCAMP4-201ENST00000316097 CSMD1Q96PZ7 3565 aa13.66□□□□□ -0.22
SCAMP4-201ENST00000316097 ARF6P62330 175 aa13.66□□□□□ -0.22
SCAMP4-201ENST00000316097 NDFIP1Q9BT67 221 aa13.66□□□□□ -0.22
SCAMP4-201ENST00000316097 HSPB8Q9UJY1 196 aa13.66□□□□□ -0.22
SCAMP4-201ENST00000316097 MYO18BQ8IUG5 2567 aa13.66□□□□□ -0.22
SCAMP4-201ENST00000316097 CGB1A6NKQ9 187 aa13.66□□□□□ -0.22
SCAMP4-201ENST00000316097 LTAP01374 205 aa13.66□□□□□ -0.22
SCAMP4-201ENST00000316097 C11orf71Q6IPW1 123 aa13.66□□□□□ -0.22
SCAMP4-201ENST00000316097 THAP8Q8NA92 274 aa13.66□□□□□ -0.22
SCAMP4-201ENST00000316097 FMC1Q96HJ9 113 aa13.66□□□□□ -0.22
SCAMP4-201ENST00000316097 LINC00574Q9H8X3 128 aa13.66□□□□□ -0.22
SCAMP4-201ENST00000316097 ARHGAP32A7KAX9 2087 aa13.65□□□□□ -0.22
SCAMP4-201ENST00000316097 K7ERU9 68 aa13.65□□□□□ -0.22
SCAMP4-201ENST00000316097 MEF2CQ06413 473 aaPredicted RBP13.65□□□□□ -0.22
SCAMP4-201ENST00000316097 FAM71F2Q6NXP2 309 aa13.65□□□□□ -0.22
SCAMP4-201ENST00000316097 STXBP6Q8NFX7 210 aa13.65□□□□□ -0.22
SCAMP4-201ENST00000316097 RAB1BQ9H0U4 201 aa13.65□□□□□ -0.22
SCAMP4-201ENST00000316097 ZNF492Q9P255 531 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms