RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 NCOA6Q14686 2063 aaPredicted RBP16.92■□□□□ 0.3
LTBP3-201ENST00000301873 TRGV9Q99603 122 aa16.92■□□□□ 0.3
LTBP3-201ENST00000301873 PAX9P55771 341 aa16.91■□□□□ 0.3
LTBP3-201ENST00000301873 WDR86Q86TI4 376 aa16.91■□□□□ 0.3
LTBP3-201ENST00000301873 WIPF3A6NGB9 483 aa16.91■□□□□ 0.3
LTBP3-201ENST00000301873 TYMSP04818 313 aa16.91■□□□□ 0.3
LTBP3-201ENST00000301873 NDPQ00604 133 aa16.91■□□□□ 0.3
LTBP3-201ENST00000301873 LDLRAD2Q5SZI1 272 aa16.91■□□□□ 0.3
LTBP3-201ENST00000301873 NUP37Q8NFH4 326 aa16.91■□□□□ 0.3
LTBP3-201ENST00000301873 OR13C6PQ8NH95 151 aa16.91■□□□□ 0.3
LTBP3-201ENST00000301873 DEFB104AQ8WTQ1 72 aa16.91■□□□□ 0.3
LTBP3-201ENST00000301873 CENPFP49454 3210 aa16.91■□□□□ 0.3
LTBP3-201ENST00000301873 IGF2RP11717 2491 aa16.91■□□□□ 0.3
LTBP3-201ENST00000301873 H3BUX3 64 aa16.91■□□□□ 0.3
LTBP3-201ENST00000301873 OR10J3Q5JRS4 329 aa16.91■□□□□ 0.3
LTBP3-201ENST00000301873 OR5AN1Q8NGI8 311 aa16.91■□□□□ 0.3
LTBP3-201ENST00000301873 LMO1P25800 156 aa16.9■□□□□ 0.3
LTBP3-201ENST00000301873 DUX4L9Q6RFH8 374 aaPredicted RBP16.9■□□□□ 0.3
LTBP3-201ENST00000301873 IFI27L1Q96BM0 104 aa16.9■□□□□ 0.3
LTBP3-201ENST00000301873 TRGV2A0A075B6R0 118 aa16.9■□□□□ 0.3
LTBP3-201ENST00000301873 PPBPP02775 128 aa16.9■□□□□ 0.3
LTBP3-201ENST00000301873 IGKV1-39P01597 117 aa16.89■□□□□ 0.29
LTBP3-201ENST00000301873 IGKV1D-39P04432 117 aa16.89■□□□□ 0.29
LTBP3-201ENST00000301873 ZNF329Q86UD4 541 aa16.89■□□□□ 0.29
LTBP3-201ENST00000301873 DMRTC2Q8IXT2 367 aaPredicted RBP16.89■□□□□ 0.29
LTBP3-201ENST00000301873 A0A1W2PPI3 338 aa16.89■□□□□ 0.29
LTBP3-201ENST00000301873 H3BUT2 72 aa16.89■□□□□ 0.29
LTBP3-201ENST00000301873 PAX1P15863 534 aa16.89■□□□□ 0.29
LTBP3-201ENST00000301873 FXYD7P58549 80 aa16.89■□□□□ 0.29
LTBP3-201ENST00000301873 NXT2Q9NPJ8 142 aaKnown RBP16.89■□□□□ 0.29
LTBP3-201ENST00000301873 YAE1D1Q9NRH1 226 aa16.89■□□□□ 0.29
LTBP3-201ENST00000301873 GNLYP22749 145 aa16.89■□□□□ 0.29
LTBP3-201ENST00000301873 TICRRQ7Z2Z1 1910 aa16.89■□□□□ 0.29
LTBP3-201ENST00000301873 IGKV3D-20A0A0C4DH25 116 aa16.88■□□□□ 0.29
LTBP3-201ENST00000301873 ZNF138P52744 262 aa16.88■□□□□ 0.29
LTBP3-201ENST00000301873 PLXNA4Q9HCM2 1894 aa16.88■□□□□ 0.29
LTBP3-201ENST00000301873 TLN1Q9Y490 2541 aaKnown RBP16.88■□□□□ 0.29
LTBP3-201ENST00000301873 PCP4P48539 62 aa16.88■□□□□ 0.29
LTBP3-201ENST00000301873 ZNF418Q8TF45 676 aaPredicted RBP16.88■□□□□ 0.29
LTBP3-201ENST00000301873 NHP2Q9NX24 153 aaKnown RBP16.88■□□□□ 0.29
LTBP3-201ENST00000301873 PSMG4Q5JS54 123 aa16.88■□□□□ 0.29
LTBP3-201ENST00000301873 NUP35Q8NFH5 326 aa16.88■□□□□ 0.29
LTBP3-201ENST00000301873 ZNF688P0C7X2 276 aa16.88■□□□□ 0.29
LTBP3-201ENST00000301873 BPESC1Q9GZL8 116 aa16.88■□□□□ 0.29
LTBP3-201ENST00000301873 LYZL1Q6UWQ5 148 aa16.87■□□□□ 0.29
LTBP3-201ENST00000301873 ANAPC10Q9UM13 185 aa16.87■□□□□ 0.29
LTBP3-201ENST00000301873 SPCS1Q9Y6A9 102 aa16.87■□□□□ 0.29
LTBP3-201ENST00000301873 TECTAO75443 2155 aa16.87■□□□□ 0.29
LTBP3-201ENST00000301873 A0A1B0GWB2 263 aa16.87■□□□□ 0.29
LTBP3-201ENST00000301873 SIGLEC15Q6ZMC9 328 aa16.87■□□□□ 0.29
LTBP3-201ENST00000301873 RNF5Q99942 180 aa16.87■□□□□ 0.29
LTBP3-201ENST00000301873 C19orf67A6NJJ6 358 aa16.87■□□□□ 0.29
LTBP3-201ENST00000301873 ATP5L2Q7Z4Y8 100 aa16.87■□□□□ 0.29
LTBP3-201ENST00000301873 FAM169BQ8N8A8 192 aa16.87■□□□□ 0.29
LTBP3-201ENST00000301873 ST20Q9HBF5 79 aa16.87■□□□□ 0.29
LTBP3-201ENST00000301873 VCX2Q9H322 139 aa16.86■□□□□ 0.29
LTBP3-201ENST00000301873 D6R8Y8 96 aa16.86■□□□□ 0.29
LTBP3-201ENST00000301873 TNFSF13O75888 250 aa16.86■□□□□ 0.29
LTBP3-201ENST00000301873 HTN3P15516 51 aa16.86■□□□□ 0.29
LTBP3-201ENST00000301873 HIVEP3Q5T1R4 2406 aa16.86■□□□□ 0.29
LTBP3-201ENST00000301873 SRSF1Q07955 248 aaKnown RBP eCLIP16.86■□□□□ 0.29
LTBP3-201ENST00000301873 MINOS1Q5TGZ0 78 aa16.86■□□□□ 0.29
LTBP3-201ENST00000301873 MINOS1-NBL1R4GNA1 71 aa16.86■□□□□ 0.29
LTBP3-201ENST00000301873 F2Z2F3 143 aa16.84■□□□□ 0.29
LTBP3-201ENST00000301873 ERVK11-1P61568 191 aa16.84■□□□□ 0.29
LTBP3-201ENST00000301873 VDAC2P45880 294 aaPredicted RBP16.84■□□□□ 0.29
LTBP3-201ENST00000301873 CYSLTR1Q9Y271 337 aa16.84■□□□□ 0.29
LTBP3-201ENST00000301873 OOSP1A8MZH6 123 aa16.84■□□□□ 0.29
LTBP3-201ENST00000301873 PRTN3P24158 256 aa16.84■□□□□ 0.29
LTBP3-201ENST00000301873 MCRIP2Q9BUT9 160 aaKnown RBP16.84■□□□□ 0.29
LTBP3-201ENST00000301873 SRRM4A7MD48 611 aaKnown RBP16.83■□□□□ 0.29
LTBP3-201ENST00000301873 PEMTQ9UBM1 199 aa16.83■□□□□ 0.29
LTBP3-201ENST00000301873 NAV2Q8IVL1 2488 aa16.83■□□□□ 0.28
LTBP3-201ENST00000301873 MMP23AO75900 390 aa16.83■□□□□ 0.28
LTBP3-201ENST00000301873 DPM2O94777 84 aa16.83■□□□□ 0.28
LTBP3-201ENST00000301873 C3orf79P0CE67 100 aa16.83■□□□□ 0.28
LTBP3-201ENST00000301873 DTX1Q86Y01 620 aa16.83■□□□□ 0.28
LTBP3-201ENST00000301873 NACAE9PAV3 2078 aa16.83■□□□□ 0.28
LTBP3-201ENST00000301873 DNAL4O96015 105 aa16.82■□□□□ 0.28
LTBP3-201ENST00000301873 A0A1B0GUS0 222 aa16.82■□□□□ 0.28
LTBP3-201ENST00000301873 SAA4P35542 130 aa16.82■□□□□ 0.28
LTBP3-201ENST00000301873 IFI27P40305 119 aaPredicted RBP16.82■□□□□ 0.28
LTBP3-201ENST00000301873 SAMD13Q5VXD3 122 aa16.82■□□□□ 0.28
LTBP3-201ENST00000301873 CHCHD1Q96BP2 118 aaKnown RBP16.82■□□□□ 0.28
LTBP3-201ENST00000301873 TMEM101Q96IK0 257 aa16.82■□□□□ 0.28
LTBP3-201ENST00000301873 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.82■□□□□ 0.28
LTBP3-201ENST00000301873 CNTFRP26992 372 aa16.82■□□□□ 0.28
LTBP3-201ENST00000301873 PLXNB1O43157 2135 aa16.81■□□□□ 0.28
LTBP3-201ENST00000301873 STHQ8IWL8 128 aa16.81■□□□□ 0.28
LTBP3-201ENST00000301873 A0A0U1RRA0 63 aa16.81■□□□□ 0.28
LTBP3-201ENST00000301873 DUSP14O95147 198 aaKnown RBP16.81■□□□□ 0.28
LTBP3-201ENST00000301873 C2orf88Q9BSF0 95 aa16.81■□□□□ 0.28
LTBP3-201ENST00000301873 FNDC4Q9H6D8 234 aaPredicted RBP16.81■□□□□ 0.28
LTBP3-201ENST00000301873 OVOL1O14753 267 aa16.81■□□□□ 0.28
LTBP3-201ENST00000301873 CD300EQ496F6 205 aaPredicted RBP16.81■□□□□ 0.28
LTBP3-201ENST00000301873 TMEM155Q4W5P6 130 aa16.81■□□□□ 0.28
LTBP3-201ENST00000301873 ACTL10Q5JWF8 245 aa16.81■□□□□ 0.28
LTBP3-201ENST00000301873 CYYR1Q96J86 154 aa16.81■□□□□ 0.28
LTBP3-201ENST00000301873 TMEM14BQ9NUH8 114 aa16.81■□□□□ 0.28
LTBP3-201ENST00000301873 DENND4CQ5VZ89 1909 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms