RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 IQCJQ1A5X6 159 aa18.79■□□□□ 0.6
TRIM54-201ENST00000296098 KIAA1644Q3SXP7 199 aa18.79■□□□□ 0.6
TRIM54-201ENST00000296098 OR10J3Q5JRS4 329 aa18.79■□□□□ 0.6
TRIM54-201ENST00000296098 SIGLEC15Q6ZMC9 328 aa18.79■□□□□ 0.6
TRIM54-201ENST00000296098 LINC00322Q6ZN03 302 aaPredicted RBP18.79■□□□□ 0.6
TRIM54-201ENST00000296098 LYPD1Q8N2G4 141 aa18.79■□□□□ 0.6
TRIM54-201ENST00000296098 C19orf71A6NCJ1 209 aa18.79■□□□□ 0.6
TRIM54-201ENST00000296098 SCGB2A1O75556 95 aa18.79■□□□□ 0.6
TRIM54-201ENST00000296098 P01737 135 aa18.79■□□□□ 0.6
TRIM54-201ENST00000296098 CT83Q5H943 113 aa18.79■□□□□ 0.6
TRIM54-201ENST00000296098 C17orf77Q96MU5 243 aa18.79■□□□□ 0.6
TRIM54-201ENST00000296098 PRO1933Q9H354 126 aa18.79■□□□□ 0.6
TRIM54-201ENST00000296098 TRAV8-1A0A0A6YYK1 113 aa18.78■□□□□ 0.6
TRIM54-201ENST00000296098 NPFFO15130 113 aa18.78■□□□□ 0.6
TRIM54-201ENST00000296098 IGLV2-11P01706 119 aa18.78■□□□□ 0.6
TRIM54-201ENST00000296098 HSPB9Q9BQS6 159 aa18.78■□□□□ 0.6
TRIM54-201ENST00000296098 PRSS22Q9GZN4 317 aa18.78■□□□□ 0.6
TRIM54-201ENST00000296098 WNK2Q9Y3S1 2297 aa18.78■□□□□ 0.6
TRIM54-201ENST00000296098 TRBV6-1A0A0K0K1D8 114 aa18.78■□□□□ 0.6
TRIM54-201ENST00000296098 IGHV3-23P01764 117 aa18.78■□□□□ 0.6
TRIM54-201ENST00000296098 SRIP30626 198 aa18.77■□□□□ 0.6
TRIM54-201ENST00000296098 ATP5L2Q7Z4Y8 100 aa18.77■□□□□ 0.6
TRIM54-201ENST00000296098 PRNTQ86SH4 94 aa18.77■□□□□ 0.6
TRIM54-201ENST00000296098 DAZAP1Q96EP5 407 aaKnown RBP18.77■□□□□ 0.6
TRIM54-201ENST00000296098 ZNF414Q96IQ9 312 aa18.77■□□□□ 0.6
TRIM54-201ENST00000296098 FBXL7Q9UJT9 491 aa18.77■□□□□ 0.6
TRIM54-201ENST00000296098 TMEM8BA6NDV4 472 aa18.76■□□□□ 0.59
TRIM54-201ENST00000296098 OR2T8A6NH00 312 aa18.76■□□□□ 0.59
TRIM54-201ENST00000296098 BCL6BQ8N143 479 aaPredicted RBP18.76■□□□□ 0.59
TRIM54-201ENST00000296098 FAM110DQ8TAY7 271 aaPredicted RBP18.76■□□□□ 0.59
TRIM54-201ENST00000296098 A8MWL6 223 aa18.76■□□□□ 0.59
TRIM54-201ENST00000296098 SLAQ13239 276 aa18.76■□□□□ 0.59
TRIM54-201ENST00000296098 TMEM75Q8N9X5 138 aa18.76■□□□□ 0.59
TRIM54-201ENST00000296098 POLR3KQ9Y2Y1 108 aaPredicted RBP18.76■□□□□ 0.59
TRIM54-201ENST00000296098 PKD1L2Q7Z442 2459 aa18.75■□□□□ 0.59
TRIM54-201ENST00000296098 SCGB1D1O95968 90 aa18.75■□□□□ 0.59
TRIM54-201ENST00000296098 PIP4P2Q8N4L2 257 aa18.75■□□□□ 0.59
TRIM54-201ENST00000296098 TXN2Q99757 166 aa18.75■□□□□ 0.59
TRIM54-201ENST00000296098 SAMD10Q9BYL1 202 aa18.75■□□□□ 0.59
TRIM54-201ENST00000296098 K7EQM0 130 aa18.74■□□□□ 0.59
TRIM54-201ENST00000296098 PDE6HQ13956 83 aa18.74■□□□□ 0.59
TRIM54-201ENST00000296098 ECSCRQ19T08 205 aa18.74■□□□□ 0.59
TRIM54-201ENST00000296098 TCF24Q7RTU0 167 aa18.74■□□□□ 0.59
TRIM54-201ENST00000296098 TMUB1Q9BVT8 246 aa18.74■□□□□ 0.59
TRIM54-201ENST00000296098 GDF5OSQ5U4N7 250 aa18.74■□□□□ 0.59
TRIM54-201ENST00000296098 UNQ5815/PRO19632Q6UWF5 114 aa18.74■□□□□ 0.59
TRIM54-201ENST00000296098 CIARTQ8N365 385 aaPredicted RBP18.74■□□□□ 0.59
TRIM54-201ENST00000296098 VN1R17PQ8TDU5 208 aa18.74■□□□□ 0.59
TRIM54-201ENST00000296098 CENPVL3A0A0U1RRI6 287 aa18.73■□□□□ 0.59
TRIM54-201ENST00000296098 A0A1B0GXF2 115 aa18.73■□□□□ 0.59
TRIM54-201ENST00000296098 ATP6V0E1O15342 81 aa18.73■□□□□ 0.59
TRIM54-201ENST00000296098 ZNF253O75346 499 aa18.73■□□□□ 0.59
TRIM54-201ENST00000296098 CTSGP08311 255 aa18.73■□□□□ 0.59
TRIM54-201ENST00000296098 DDTP30046 118 aa18.73■□□□□ 0.59
TRIM54-201ENST00000296098 DEFA6Q01524 100 aa18.73■□□□□ 0.59
TRIM54-201ENST00000296098 Q6ZWC4 215 aa18.73■□□□□ 0.59
TRIM54-201ENST00000296098 ZNF664Q8N3J9 261 aa18.73■□□□□ 0.59
TRIM54-201ENST00000296098 PIMREGQ9BSJ6 248 aa18.73■□□□□ 0.59
TRIM54-201ENST00000296098 NAGKQ9UJ70 344 aa18.73■□□□□ 0.59
TRIM54-201ENST00000296098 VWC2LB2RUY7 222 aa18.73■□□□□ 0.59
TRIM54-201ENST00000296098 NPIPB6E9PJ23 425 aa18.73■□□□□ 0.59
TRIM54-201ENST00000296098 GOSR1O95249 250 aa18.73■□□□□ 0.59
TRIM54-201ENST00000296098 FAM209BQ5JX69 171 aa18.73■□□□□ 0.59
TRIM54-201ENST00000296098 KCNS1Q96KK3 526 aa18.73■□□□□ 0.59
TRIM54-201ENST00000296098 CCL19Q99731 98 aa18.73■□□□□ 0.59
TRIM54-201ENST00000296098 GFRA4Q9GZZ7 299 aa18.73■□□□□ 0.59
TRIM54-201ENST00000296098 COL8A1P27658 744 aa18.72■□□□□ 0.59
TRIM54-201ENST00000296098 AAMDCQ9H7C9 122 aa18.72■□□□□ 0.59
TRIM54-201ENST00000296098 SOX21Q9Y651 276 aaPredicted RBP18.72■□□□□ 0.59
TRIM54-201ENST00000296098 PAX1P15863 534 aa18.71■□□□□ 0.59
TRIM54-201ENST00000296098 OR4B1Q8NGF8 309 aa18.71■□□□□ 0.59
TRIM54-201ENST00000296098 GTSF1Q8WW33 167 aa18.71■□□□□ 0.59
TRIM54-201ENST00000296098 RCHY1Q96PM5 261 aa18.71■□□□□ 0.59
TRIM54-201ENST00000296098 ZFP30Q9Y2G7 519 aa18.71■□□□□ 0.59
TRIM54-201ENST00000296098 CACNA1AO00555 2505 aa18.71■□□□□ 0.59
TRIM54-201ENST00000296098 DIRC3C9JPN6 131 aa18.71■□□□□ 0.59
TRIM54-201ENST00000296098 CAMPP49913 170 aa18.71■□□□□ 0.59
TRIM54-201ENST00000296098 HBBP68871 147 aa18.71■□□□□ 0.59
TRIM54-201ENST00000296098 PSG3Q16557 428 aa18.71■□□□□ 0.59
TRIM54-201ENST00000296098 Q71RC1 249 aaPredicted RBP18.71■□□□□ 0.59
TRIM54-201ENST00000296098 RPL7P18124 248 aaKnown RBP18.7■□□□□ 0.58
TRIM54-201ENST00000296098 PAX8Q06710 450 aa18.7■□□□□ 0.58
TRIM54-201ENST00000296098 KLK9Q2XQG4 91 aa18.7■□□□□ 0.58
TRIM54-201ENST00000296098 SIGLECL1Q8N7X8 197 aa18.7■□□□□ 0.58
TRIM54-201ENST00000296098 NOL4LQ96MY1 436 aaPredicted RBP18.7■□□□□ 0.58
TRIM54-201ENST00000296098 RABAC1Q9UI14 185 aa18.7■□□□□ 0.58
TRIM54-201ENST00000296098 KLK9Q9UKQ9 250 aa18.7■□□□□ 0.58
TRIM54-201ENST00000296098 PSG8Q9UQ74 426 aa18.7■□□□□ 0.58
TRIM54-201ENST00000296098 C15orf32Q32M92 178 aa18.69■□□□□ 0.58
TRIM54-201ENST00000296098 RBPMS2Q6ZRY4 209 aaKnown RBP18.69■□□□□ 0.58
TRIM54-201ENST00000296098 ZNF502Q8TBZ5 544 aa18.69■□□□□ 0.58
TRIM54-201ENST00000296098 FAM231BA6NCW3 169 aa18.69■□□□□ 0.58
TRIM54-201ENST00000296098 M0R3E3 92 aa18.69■□□□□ 0.58
TRIM54-201ENST00000296098 RHOGP84095 191 aa18.69■□□□□ 0.58
TRIM54-201ENST00000296098 ZC2HC1AQ96GY0 325 aa18.69■□□□□ 0.58
TRIM54-201ENST00000296098 PGLYRP4Q96LB8 373 aa18.69■□□□□ 0.58
TRIM54-201ENST00000296098 SSBP4Q9BWG4 385 aaPredicted RBP18.69■□□□□ 0.58
TRIM54-201ENST00000296098 MED13LQ71F56 2210 aa18.68■□□□□ 0.58
TRIM54-201ENST00000296098 PSG9Q00887 426 aa18.68■□□□□ 0.58
TRIM54-201ENST00000296098 C16orf54Q6UWD8 224 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms