RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 DAZAP1Q96EP5 407 aaKnown RBP13.38□□□□□ -0.27
CHRNE-201ENST00000293780 SLC25A39Q9BZJ4 359 aaPredicted RBP13.38□□□□□ -0.27
CHRNE-201ENST00000293780 RALYQ9UKM9 306 aaKnown RBP13.38□□□□□ -0.27
CHRNE-201ENST00000293780 DCHS2Q6V1P9 2916 aa13.38□□□□□ -0.27
CHRNE-201ENST00000293780 UBE2V1Q13404 147 aa13.38□□□□□ -0.27
CHRNE-201ENST00000293780 FAM120AOSQ5T036 256 aa13.38□□□□□ -0.27
CHRNE-201ENST00000293780 PRNTQ86SH4 94 aa13.38□□□□□ -0.27
CHRNE-201ENST00000293780 ARL6IP6Q8N6S5 226 aa13.38□□□□□ -0.27
CHRNE-201ENST00000293780 ZNF492Q9P255 531 aa13.38□□□□□ -0.27
CHRNE-201ENST00000293780 TRAV9-2A0A087WT02 112 aa13.37□□□□□ -0.27
CHRNE-201ENST00000293780 RBP4P02753 201 aa13.37□□□□□ -0.27
CHRNE-201ENST00000293780 GOLT1AQ6ZVE7 132 aa13.37□□□□□ -0.27
CHRNE-201ENST00000293780 SRSF12Q8WXF0 261 aaKnown RBP13.37□□□□□ -0.27
CHRNE-201ENST00000293780 C17orf77Q96MU5 243 aa13.37□□□□□ -0.27
CHRNE-201ENST00000293780 MRPS16Q9Y3D3 137 aaKnown RBP13.37□□□□□ -0.27
CHRNE-201ENST00000293780 COX11Q9Y6N1 276 aa13.37□□□□□ -0.27
CHRNE-201ENST00000293780 IGLV2-11P01706 119 aa13.37□□□□□ -0.27
CHRNE-201ENST00000293780 ZNF738Q8NE65 137 aa13.37□□□□□ -0.27
CHRNE-201ENST00000293780 SCNM1Q9BWG6 230 aa13.37□□□□□ -0.27
CHRNE-201ENST00000293780 TP73-AS1Q9UF72 201 aa13.37□□□□□ -0.27
CHRNE-201ENST00000293780 I3L2K1 104 aa13.36□□□□□ -0.27
CHRNE-201ENST00000293780 ZNF138P52744 262 aa13.36□□□□□ -0.27
CHRNE-201ENST00000293780 CT83Q5H943 113 aa13.36□□□□□ -0.27
CHRNE-201ENST00000293780 RBPMS2Q6ZRY4 209 aaKnown RBP13.36□□□□□ -0.27
CHRNE-201ENST00000293780 Q86TA4 180 aa13.36□□□□□ -0.27
CHRNE-201ENST00000293780 COL8A1P27658 744 aa13.36□□□□□ -0.27
CHRNE-201ENST00000293780 OTORQ9NRC9 128 aa13.36□□□□□ -0.27
CHRNE-201ENST00000293780 ARHGAP32A7KAX9 2087 aa13.35□□□□□ -0.27
CHRNE-201ENST00000293780 IGHV1-24A0A0C4DH33 117 aa13.35□□□□□ -0.27
CHRNE-201ENST00000293780 ZNF785A8K8V0 405 aa13.35□□□□□ -0.27
CHRNE-201ENST00000293780 RASL11BQ9BPW5 248 aa13.35□□□□□ -0.27
CHRNE-201ENST00000293780 IGKV1-17P01599 117 aa13.35□□□□□ -0.27
CHRNE-201ENST00000293780 APOBEC3AP31941 199 aaPredicted RBP13.35□□□□□ -0.27
CHRNE-201ENST00000293780 PLGLAQ15195 96 aa13.35□□□□□ -0.27
CHRNE-201ENST00000293780 LDLRAD2Q5SZI1 272 aa13.35□□□□□ -0.27
CHRNE-201ENST00000293780 TNFRSF14Q92956 283 aa13.35□□□□□ -0.27
CHRNE-201ENST00000293780 RPEQ96AT9 228 aa13.34□□□□□ -0.27
CHRNE-201ENST00000293780 TMEM70Q9BUB7 260 aa13.34□□□□□ -0.27
CHRNE-201ENST00000293780 PPIAL4CA0A0B4J2A2 164 aa13.34□□□□□ -0.27
CHRNE-201ENST00000293780 NPIPB6E9PJ23 425 aa13.34□□□□□ -0.27
CHRNE-201ENST00000293780 OVOL3O00110 214 aa13.34□□□□□ -0.27
CHRNE-201ENST00000293780 PPIAL4GP0DN37 164 aa13.34□□□□□ -0.27
CHRNE-201ENST00000293780 PAX2Q02962 417 aa13.34□□□□□ -0.27
CHRNE-201ENST00000293780 SAPCD1Q5SSQ6 148 aa13.34□□□□□ -0.27
CHRNE-201ENST00000293780 GFRA4Q9GZZ7 299 aa13.34□□□□□ -0.27
CHRNE-201ENST00000293780 SVEP1Q4LDE5 3571 aa13.34□□□□□ -0.27
CHRNE-201ENST00000293780 LOC105371242A0A075B767 164 aa13.33□□□□□ -0.28
CHRNE-201ENST00000293780 K7EP13 123 aa13.33□□□□□ -0.28
CHRNE-201ENST00000293780 CHEK1O14757 476 aa13.33□□□□□ -0.28
CHRNE-201ENST00000293780 TMEM14CQ9P0S9 112 aa13.33□□□□□ -0.28
CHRNE-201ENST00000293780 S4R3C0 116 aa13.33□□□□□ -0.28
CHRNE-201ENST00000293780 LOC102724200A0A096LPH7 203 aaPredicted RBP13.33□□□□□ -0.28
CHRNE-201ENST00000293780 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.33□□□□□ -0.28
CHRNE-201ENST00000293780 APOHP02749 345 aaPredicted RBP13.33□□□□□ -0.28
CHRNE-201ENST00000293780 RBPJQ06330 500 aa13.33□□□□□ -0.28
CHRNE-201ENST00000293780 LINC01560Q8TB33 94 aa13.33□□□□□ -0.28
CHRNE-201ENST00000293780 ZC2HC1AQ96GY0 325 aa13.33□□□□□ -0.28
CHRNE-201ENST00000293780 NGBQ9NPG2 151 aa13.33□□□□□ -0.28
CHRNE-201ENST00000293780 OR4C46A6NHA9 309 aa13.32□□□□□ -0.28
CHRNE-201ENST00000293780 CNIH1O95406 144 aa13.32□□□□□ -0.28
CHRNE-201ENST00000293780 COTL1Q14019 142 aa13.32□□□□□ -0.28
CHRNE-201ENST00000293780 OR4F17Q8NGA8 305 aa13.32□□□□□ -0.28
CHRNE-201ENST00000293780 MCRIP2Q9BUT9 160 aaKnown RBP13.32□□□□□ -0.28
CHRNE-201ENST00000293780 SOX21Q9Y651 276 aaPredicted RBP13.32□□□□□ -0.28
CHRNE-201ENST00000293780 ABCA4P78363 2273 aa13.32□□□□□ -0.28
CHRNE-201ENST00000293780 B9A039 149 aa13.32□□□□□ -0.28
CHRNE-201ENST00000293780 K7EIM0 57 aa13.32□□□□□ -0.28
CHRNE-201ENST00000293780 CDKN1BP46527 198 aa13.32□□□□□ -0.28
CHRNE-201ENST00000293780 FBLN7Q53RD9 439 aa13.32□□□□□ -0.28
CHRNE-201ENST00000293780 KLF17Q5JT82 389 aaPredicted RBP13.32□□□□□ -0.28
CHRNE-201ENST00000293780 LEPROTL1O95214 131 aa13.31□□□□□ -0.28
CHRNE-201ENST00000293780 HOXB4P17483 251 aaPredicted RBP13.31□□□□□ -0.28
CHRNE-201ENST00000293780 CHCHD1Q96BP2 118 aaKnown RBP13.31□□□□□ -0.28
CHRNE-201ENST00000293780 CEP295Q9C0D2 2601 aa13.31□□□□□ -0.28
CHRNE-201ENST00000293780 hDV102S1A0JD36 115 aa13.31□□□□□ -0.28
CHRNE-201ENST00000293780 LY6LH3BQJ8 138 aa13.31□□□□□ -0.28
CHRNE-201ENST00000293780 SYS1-DBNDD2H3BUS1 97 aa13.31□□□□□ -0.28
CHRNE-201ENST00000293780 TIMM23O14925 209 aa13.31□□□□□ -0.28
CHRNE-201ENST00000293780 CSN3P07498 182 aa13.31□□□□□ -0.28
CHRNE-201ENST00000293780 CD3EP07766 207 aa13.31□□□□□ -0.28
CHRNE-201ENST00000293780 BCL6BQ8N143 479 aaPredicted RBP13.31□□□□□ -0.28
CHRNE-201ENST00000293780 OR4C5Q8NGB2 326 aa13.31□□□□□ -0.28
CHRNE-201ENST00000293780 NDFIP1Q9BT67 221 aa13.31□□□□□ -0.28
CHRNE-201ENST00000293780 ONECUT1Q9UBC0 465 aa13.31□□□□□ -0.28
CHRNE-201ENST00000293780 TRBV19A0A075B6N1 114 aa13.3□□□□□ -0.28
CHRNE-201ENST00000293780 IGHV2-70DA0A0C4DH43 119 aa13.3□□□□□ -0.28
CHRNE-201ENST00000293780 HAX1O00165 279 aa13.3□□□□□ -0.28
CHRNE-201ENST00000293780 ARMS2P0C7Q2 107 aa13.3□□□□□ -0.28
CHRNE-201ENST00000293780 C16orf54Q6UWD8 224 aa13.3□□□□□ -0.28
CHRNE-201ENST00000293780 TIMM8BQ9Y5J9 83 aaPredicted RBP13.3□□□□□ -0.28
CHRNE-201ENST00000293780 CRXO43186 299 aaPredicted RBP13.3□□□□□ -0.28
CHRNE-201ENST00000293780 FAM162BQ5T6X4 162 aa13.3□□□□□ -0.28
CHRNE-201ENST00000293780 MUC15Q8N387 334 aa13.3□□□□□ -0.28
CHRNE-201ENST00000293780 SHANK2-AS3Q9BTD1 123 aa13.3□□□□□ -0.28
CHRNE-201ENST00000293780 TMUB1Q9BVT8 246 aa13.3□□□□□ -0.28
CHRNE-201ENST00000293780 FAM231BA6NCW3 169 aa13.29□□□□□ -0.28
CHRNE-201ENST00000293780 LY6HO94772 140 aa13.29□□□□□ -0.28
CHRNE-201ENST00000293780 HILPDAQ9Y5L2 63 aa13.29□□□□□ -0.28
CHRNE-201ENST00000293780 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.29□□□□□ -0.28
CHRNE-201ENST00000293780 H0Y8G0 127 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms