RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 C9orf118A6NHY6 69 aa9.28□□□□□ -0.92
NPC1L1-201ENST00000289547 FAM71F2Q6NXP2 309 aa9.28□□□□□ -0.92
NPC1L1-201ENST00000289547 ZNF497Q6ZNH5 498 aa9.28□□□□□ -0.92
NPC1L1-201ENST00000289547 Q8NA96 180 aa9.28□□□□□ -0.92
NPC1L1-201ENST00000289547 CREBBPQ92793 2442 aa9.28□□□□□ -0.92
NPC1L1-201ENST00000289547 H3BRM9 83 aa9.28□□□□□ -0.92
NPC1L1-201ENST00000289547 ZNF726P1Q15940 193 aa9.28□□□□□ -0.92
NPC1L1-201ENST00000289547 FAM74A4Q5TZK3 123 aa9.28□□□□□ -0.92
NPC1L1-201ENST00000289547 LYPD6BQ8NI32 183 aa9.28□□□□□ -0.92
NPC1L1-201ENST00000289547 CD69Q07108 199 aa9.28□□□□□ -0.92
NPC1L1-201ENST00000289547 COA6Q5JTJ3 125 aaKnown RBP9.28□□□□□ -0.92
NPC1L1-201ENST00000289547 DLX4Q92988 240 aaPredicted RBP9.28□□□□□ -0.92
NPC1L1-201ENST00000289547 SLC25A2Q9BXI2 301 aa9.28□□□□□ -0.92
NPC1L1-201ENST00000289547 OTORQ9NRC9 128 aa9.28□□□□□ -0.92
NPC1L1-201ENST00000289547 HEATR5AQ86XA9 2040 aa9.28□□□□□ -0.92
NPC1L1-201ENST00000289547 IGHV3OR16-13A0A075B7E8 117 aa9.28□□□□□ -0.92
NPC1L1-201ENST00000289547 IGHV3-74A0A0B4J1X5 117 aa9.28□□□□□ -0.92
NPC1L1-201ENST00000289547 NPIPB6E9PJ23 425 aa9.28□□□□□ -0.92
NPC1L1-201ENST00000289547 RNASE1P07998 156 aaKnown RBP9.28□□□□□ -0.92
NPC1L1-201ENST00000289547 DAZAP2Q15038 168 aaPredicted RBP9.28□□□□□ -0.92
NPC1L1-201ENST00000289547 MEIG1Q5JSS6 88 aa9.28□□□□□ -0.92
NPC1L1-201ENST00000289547 MRAP2Q96G30 205 aa9.28□□□□□ -0.92
NPC1L1-201ENST00000289547 MMP23AO75900 390 aa9.27□□□□□ -0.92
NPC1L1-201ENST00000289547 EVI2AP22794 236 aa9.27□□□□□ -0.92
NPC1L1-201ENST00000289547 DEFB113Q30KQ7 82 aa9.27□□□□□ -0.92
NPC1L1-201ENST00000289547 RNF138Q8WVD3 245 aa9.27□□□□□ -0.92
NPC1L1-201ENST00000289547 ZNF48Q96MX3 618 aaPredicted RBP9.27□□□□□ -0.92
NPC1L1-201ENST00000289547 TMEM133Q9H2Q1 129 aa9.27□□□□□ -0.92
NPC1L1-201ENST00000289547 CUL9Q8IWT3 2517 aa9.27□□□□□ -0.93
NPC1L1-201ENST00000289547 PLXNB3Q9ULL4 1909 aa9.27□□□□□ -0.93
NPC1L1-201ENST00000289547 PRB4P10163 310 aaPredicted RBP9.27□□□□□ -0.93
NPC1L1-201ENST00000289547 SLC25A48Q6ZT89 311 aaKnown RBP9.27□□□□□ -0.93
NPC1L1-201ENST00000289547 S4R3C0 116 aa9.27□□□□□ -0.93
NPC1L1-201ENST00000289547 BDP1A6H8Y1 2624 aa9.27□□□□□ -0.93
NPC1L1-201ENST00000289547 PLXND1Q9Y4D7 1925 aa9.27□□□□□ -0.93
NPC1L1-201ENST00000289547 D6R8Y8 96 aa9.27□□□□□ -0.93
NPC1L1-201ENST00000289547 M0R1W7 72 aa9.27□□□□□ -0.93
NPC1L1-201ENST00000289547 DUTP33316 252 aaKnown RBP9.27□□□□□ -0.93
NPC1L1-201ENST00000289547 PSG8Q9UQ74 426 aa9.27□□□□□ -0.93
NPC1L1-201ENST00000289547 NTF4P34130 210 aa9.27□□□□□ -0.93
NPC1L1-201ENST00000289547 VDAC2P45880 294 aaPredicted RBP9.27□□□□□ -0.93
NPC1L1-201ENST00000289547 GAGE12HA6NDE8 117 aa9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 UPK2O00526 184 aa9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 NCR2O95944 276 aa9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 PPBPP02775 128 aa9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 MSMBP08118 114 aa9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 TDRG1Q3Y452 100 aa9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 FAM106AQ4KMX7 169 aa9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 ZC2HC1BQ5TFG8 222 aa9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 CEP192Q8TEP8 1941 aa9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 IL15RAQ13261 267 aa9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 COLCA1Q6ZS62 124 aa9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 METTL26Q96S19 204 aa9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 CSTL1Q9H114 145 aa9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 J3QLI3 93 aa9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 K7EP34 96 aa9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 KLF17Q5JT82 389 aaPredicted RBP9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 PAPPA-AS1Q5QFB9 102 aa9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 NOTCH3Q9UM47 2321 aa9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 IGHV2-70DA0A0C4DH43 119 aa9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 COL8A2P25067 703 aa9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 PPIFP30405 207 aaKnown RBP9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 PAX9P55771 341 aa9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 ATP5G2Q06055 141 aa9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 SRSF7Q16629 238 aaKnown RBP eCLIP9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 BVES-AS1Q5T3Y7 98 aa9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 C1orf122Q6ZSJ8 110 aa9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 ZNF114Q8NC26 417 aa9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 CHAC1Q9BUX1 264 aa9.26□□□□□ -0.93
NPC1L1-201ENST00000289547 TRAV12-3A0A0B4J271 114 aa9.25□□□□□ -0.93
NPC1L1-201ENST00000289547 NPIPB11E5RHQ5 1161 aa9.25□□□□□ -0.93
NPC1L1-201ENST00000289547 TFF1P04155 84 aa9.25□□□□□ -0.93
NPC1L1-201ENST00000289547 SAA1P0DJI8 122 aaPredicted RBP9.25□□□□□ -0.93
NPC1L1-201ENST00000289547 CD300EQ496F6 205 aaPredicted RBP9.25□□□□□ -0.93
NPC1L1-201ENST00000289547 LINC00479Q96M42 142 aa9.25□□□□□ -0.93
NPC1L1-201ENST00000289547 PGPEP1Q9NXJ5 209 aa9.25□□□□□ -0.93
NPC1L1-201ENST00000289547 SMPXQ9UHP9 88 aa9.25□□□□□ -0.93
NPC1L1-201ENST00000289547 TCRBV4S1A1TA0A5B7 111 aa9.25□□□□□ -0.93
NPC1L1-201ENST00000289547 IGLV1-44P01699 117 aa9.25□□□□□ -0.93
NPC1L1-201ENST00000289547 LHFPL4Q7Z7J7 247 aa9.25□□□□□ -0.93
NPC1L1-201ENST00000289547 CYYR1Q96J86 154 aa9.25□□□□□ -0.93
NPC1L1-201ENST00000289547 C19orf54Q5BKX5 351 aa9.25□□□□□ -0.93
NPC1L1-201ENST00000289547 FOXA2Q9Y261 457 aaPredicted RBP9.25□□□□□ -0.93
NPC1L1-201ENST00000289547 OOSP1A8MZH6 123 aa9.25□□□□□ -0.93
NPC1L1-201ENST00000289547 IGKV1D-33P01593 117 aa9.25□□□□□ -0.93
NPC1L1-201ENST00000289547 IGKV1-33P01594 117 aa9.25□□□□□ -0.93
NPC1L1-201ENST00000289547 ID1P41134 155 aa9.25□□□□□ -0.93
NPC1L1-201ENST00000289547 MINOS1Q5TGZ0 78 aa9.25□□□□□ -0.93
NPC1L1-201ENST00000289547 MINOS1-NBL1R4GNA1 71 aa9.25□□□□□ -0.93
NPC1L1-201ENST00000289547 TRAV2A0A0B4J234 112 aa9.24□□□□□ -0.93
NPC1L1-201ENST00000289547 C15orf62A8K5M9 175 aa9.24□□□□□ -0.93
NPC1L1-201ENST00000289547 F2Z2F3 143 aa9.24□□□□□ -0.93
NPC1L1-201ENST00000289547 SSBP2P81877 361 aaPredicted RBP9.24□□□□□ -0.93
NPC1L1-201ENST00000289547 ZNF56Q15929 161 aa9.24□□□□□ -0.93
NPC1L1-201ENST00000289547 SYT8Q8NBV8 401 aa9.24□□□□□ -0.93
NPC1L1-201ENST00000289547 CADP27708 2225 aa9.24□□□□□ -0.93
NPC1L1-201ENST00000289547 SRSF1Q07955 248 aaKnown RBP eCLIP9.24□□□□□ -0.93
NPC1L1-201ENST00000289547 MORN2Q502X0 79 aa9.24□□□□□ -0.93
NPC1L1-201ENST00000289547 WFDC12Q8WWY7 111 aa9.24□□□□□ -0.93
NPC1L1-201ENST00000289547 CHTOPQ9Y3Y2 248 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms