RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 OR9G9P0C7N8 305 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 SAA2P0DJI9 122 aaPredicted RBP2.32□□□□□ -2.04
HERC4-201ENST00000277817 LYNX1P0DP58 116 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 PRB4P10163 310 aaPredicted RBP2.32□□□□□ -2.04
HERC4-201ENST00000277817 HINT1P49773 126 aaPredicted RBP2.32□□□□□ -2.04
HERC4-201ENST00000277817 SRSF6Q13247 344 aaKnown RBP2.32□□□□□ -2.04
HERC4-201ENST00000277817 LINC00242Q5T6M2 205 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 GFI1BQ5VTD9 330 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 TMEM42Q69YG0 159 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 GOLT1AQ6ZVE7 132 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 TCF23Q7RTU1 214 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 TMEM183AQ8IXX5 376 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 MRPL20Q9BYC9 149 aaKnown RBP2.32□□□□□ -2.04
HERC4-201ENST00000277817 IFI27L2Q9H2X8 130 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 FBXL15Q9H469 300 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 USF3Q68DE3 2245 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 CEP295Q9C0D2 2601 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 NOTCH3Q9UM47 2321 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 A0A087WWC5 75 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 MUC21A0A0G2JKD1 596 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 MUC21A0A140T8X8 626 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 A0A1B0GV90 55 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 TMEM189A5PLL7 270 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 IFITM10A6NMD0 228 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 M0QZK8 103 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 SIVA1O15304 175 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 HIST1H2BKO60814 126 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 SS18L1O75177 396 aaPredicted RBP2.31□□□□□ -2.04
HERC4-201ENST00000277817 GGCTO75223 188 aaKnown RBP2.31□□□□□ -2.04
HERC4-201ENST00000277817 IGHV3-23P01764 117 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 HLA-DQA1P01909 254 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 HIST1H2BJP06899 126 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 CXCL1P09341 107 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 NBEAP1P0C6P0 100 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 FAM106CPP0CH98 169 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 ADCYAP1P18509 176 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 HIST1H2BOP23527 126 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 CD24P25063 80 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 HIST1H2BBP33778 126 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 MAS1LP35410 378 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 HIST1H2BDP58876 126 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 HIST1H2BCP62807 126 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 KLF5Q13887 457 aaPredicted RBP2.31□□□□□ -2.04
HERC4-201ENST00000277817 HIST2H2BEQ16778 126 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 RSPO1Q2MKA7 263 aaPredicted RBP2.31□□□□□ -2.04
HERC4-201ENST00000277817 SPATA45Q537H7 98 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 NMSQ5H8A3 153 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.31□□□□□ -2.04
HERC4-201ENST00000277817 MUC21Q5SSG8 566 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 RPP25LQ8N5L8 163 aaKnown RBP2.31□□□□□ -2.04
HERC4-201ENST00000277817 WDR31Q8NA23 367 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 HIST1H2BHQ93079 126 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 C1orf147Q96MC9 270 aaPredicted RBP2.31□□□□□ -2.04
HERC4-201ENST00000277817 C17orf77Q96MU5 243 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 HIST1H2BNQ99877 126 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 HIST1H2BMQ99879 126 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 CLEC7AQ9BXN2 247 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 LIME1Q9H400 295 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 RABAC1Q9UI14 185 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 IGHV3OR16-10A0A075B7F0 116 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 LOC102724200A0A096LPH7 203 aaPredicted RBP2.31□□□□□ -2.04
HERC4-201ENST00000277817 A0A0G2JRQ6 117 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 M0QXV9 152 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 TCF21O43680 179 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 YPEL1O60688 119 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 LEPROTL1O95214 131 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 IL4P05112 153 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 SCGB1C2P0DMR2 95 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 CD99P14209 185 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 CKS2P33552 79 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 GPX4P36969 197 aaPredicted RBP2.31□□□□□ -2.04
HERC4-201ENST00000277817 PPOXP50336 477 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 SRSF4Q08170 494 aaKnown RBP2.31□□□□□ -2.04
HERC4-201ENST00000277817 HERPUD1Q15011 391 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 SPANXN1Q5VSR9 72 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 LEMD1Q68G75 181 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 PVRIGQ6DKI7 326 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 UNQ5815/PRO19632Q6UWF5 114 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 HEPN1Q6WQI6 88 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 FAM19A2Q8N3H0 131 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 OR10W1Q8NGF6 305 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 OSR1Q8TAX0 266 aaPredicted RBP2.31□□□□□ -2.04
HERC4-201ENST00000277817 YPEL2Q96QA6 119 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 C19orf24Q9BVV8 132 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 RNASE7Q9H1E1 156 aaKnown RBP2.31□□□□□ -2.04
HERC4-201ENST00000277817 PROK2Q9HC23 129 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 HSPB8Q9UJY1 196 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 LYSTQ99698 3801 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 SPEGQ15772 3267 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 IGHV3-49A0A0A0MS15 119 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 TRAV3A0A0B4J244 114 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 OR2T8A6NH00 312 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 TIMM23O14925 209 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 MRPS12O15235 138 aaKnown RBP2.31□□□□□ -2.04
HERC4-201ENST00000277817 RBFOX2O43251 390 aaKnown RBP eCLIP2.31□□□□□ -2.04
HERC4-201ENST00000277817 SAA1P0DJI8 122 aaPredicted RBP2.31□□□□□ -2.04
HERC4-201ENST00000277817 TFPI2P48307 235 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 NMUP48645 174 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 LCN2P80188 198 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms