RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ENSAO43768 121 aaKnown RBP10.28□□□□□ -0.76
C9orf3-201ENST00000277198 LTAP01374 205 aa10.28□□□□□ -0.76
C9orf3-201ENST00000277198 C3orf79P0CE67 100 aa10.28□□□□□ -0.76
C9orf3-201ENST00000277198 GP9P14770 177 aa10.28□□□□□ -0.76
C9orf3-201ENST00000277198 APOBEC3AP31941 199 aaPredicted RBP10.28□□□□□ -0.76
C9orf3-201ENST00000277198 MMDQ15546 238 aa10.28□□□□□ -0.76
C9orf3-201ENST00000277198 ZNF124Q15973 351 aa10.28□□□□□ -0.76
C9orf3-201ENST00000277198 DMRTA1Q5VZB9 504 aa10.28□□□□□ -0.76
C9orf3-201ENST00000277198 RITA1Q96K30 269 aa10.28□□□□□ -0.76
C9orf3-201ENST00000277198 ALKBH7Q9BT30 221 aaPredicted RBP10.28□□□□□ -0.76
C9orf3-201ENST00000277198 RPP21Q9H633 154 aaKnown RBP10.28□□□□□ -0.76
C9orf3-201ENST00000277198 UQCR10Q9UDW1 63 aa10.28□□□□□ -0.76
C9orf3-201ENST00000277198 YLPM1P49750 1951 aaKnown RBP10.28□□□□□ -0.76
C9orf3-201ENST00000277198 IGHV2-26A0A0B4J1V2 119 aa10.28□□□□□ -0.76
C9orf3-201ENST00000277198 C20orf202A1L168 122 aa10.28□□□□□ -0.76
C9orf3-201ENST00000277198 GAGE1Q13065 139 aa10.28□□□□□ -0.76
C9orf3-201ENST00000277198 TNXAQ16473 311 aa10.28□□□□□ -0.76
C9orf3-201ENST00000277198 PPP1R27Q86WC6 154 aa10.28□□□□□ -0.76
C9orf3-201ENST00000277198 RNF24Q9Y225 148 aa10.28□□□□□ -0.76
C9orf3-201ENST00000277198 RNF114Q9Y508 228 aa10.28□□□□□ -0.76
C9orf3-201ENST00000277198 INSIG2Q9Y5U4 225 aa10.28□□□□□ -0.76
C9orf3-201ENST00000277198 TRBV6-1A0A0K0K1D8 114 aa10.27□□□□□ -0.77
C9orf3-201ENST00000277198 C19orf71A6NCJ1 209 aa10.27□□□□□ -0.77
C9orf3-201ENST00000277198 E7EQL1 145 aa10.27□□□□□ -0.77
C9orf3-201ENST00000277198 HSBP1O75506 76 aa10.27□□□□□ -0.77
C9orf3-201ENST00000277198 MOSP00540 346 aa10.27□□□□□ -0.77
C9orf3-201ENST00000277198 IGHV3-48P01763 117 aa10.27□□□□□ -0.77
C9orf3-201ENST00000277198 TCRAP04437 139 aa10.27□□□□□ -0.77
C9orf3-201ENST00000277198 HBBP68871 147 aa10.27□□□□□ -0.77
C9orf3-201ENST00000277198 DEFB113Q30KQ7 82 aa10.27□□□□□ -0.77
C9orf3-201ENST00000277198 SPATA45Q537H7 98 aa10.27□□□□□ -0.77
C9orf3-201ENST00000277198 GDF5OSQ5U4N7 250 aa10.27□□□□□ -0.77
C9orf3-201ENST00000277198 HCP5Q6MZN7 132 aa10.27□□□□□ -0.77
C9orf3-201ENST00000277198 KRTAP1-3Q8IUG1 177 aa10.27□□□□□ -0.77
C9orf3-201ENST00000277198 CLEC7AQ9BXN2 247 aa10.27□□□□□ -0.77
C9orf3-201ENST00000277198 ZFHX3Q15911 3703 aa10.27□□□□□ -0.77
C9orf3-201ENST00000277198 IGHV1-3A0A0C4DH29 117 aa10.26□□□□□ -0.77
C9orf3-201ENST00000277198 BUB1B-PAK6H3BSN5 160 aa10.26□□□□□ -0.77
C9orf3-201ENST00000277198 GOSR1O95249 250 aa10.26□□□□□ -0.77
C9orf3-201ENST00000277198 GNG5P63218 68 aa10.26□□□□□ -0.77
C9orf3-201ENST00000277198 PRR27Q6MZM9 219 aa10.26□□□□□ -0.77
C9orf3-201ENST00000277198 ZNF841Q6ZN19 808 aa10.26□□□□□ -0.77
C9orf3-201ENST00000277198 WFDC11Q8NEX6 87 aa10.26□□□□□ -0.77
C9orf3-201ENST00000277198 BLNKQ8WV28 456 aa10.26□□□□□ -0.77
C9orf3-201ENST00000277198 FOXC2Q99958 501 aa10.26□□□□□ -0.77
C9orf3-201ENST00000277198 OTORQ9NRC9 128 aa10.26□□□□□ -0.77
C9orf3-201ENST00000277198 HIGD1AQ9Y241 93 aa10.26□□□□□ -0.77
C9orf3-201ENST00000277198 MED13LQ71F56 2210 aa10.26□□□□□ -0.77
C9orf3-201ENST00000277198 P01737 135 aa10.26□□□□□ -0.77
C9orf3-201ENST00000277198 Q9H3A6 140 aa10.26□□□□□ -0.77
C9orf3-201ENST00000277198 TEX22C9J3V5 150 aa10.25□□□□□ -0.77
C9orf3-201ENST00000277198 NPIPB6E9PJ23 425 aa10.25□□□□□ -0.77
C9orf3-201ENST00000277198 IGLC1P0CG04 106 aa10.25□□□□□ -0.77
C9orf3-201ENST00000277198 IGLC2P0DOY2 106 aa10.25□□□□□ -0.77
C9orf3-201ENST00000277198 IGLC3P0DOY3 106 aa10.25□□□□□ -0.77
C9orf3-201ENST00000277198 COL5A1-AS1Q5SY13 56 aa10.25□□□□□ -0.77
C9orf3-201ENST00000277198 DAZAP1Q96EP5 407 aaKnown RBP10.25□□□□□ -0.77
C9orf3-201ENST00000277198 CCL19Q99731 98 aa10.25□□□□□ -0.77
C9orf3-201ENST00000277198 IGHV3-72A0A0B4J1Y9 119 aa10.25□□□□□ -0.77
C9orf3-201ENST00000277198 FAM181BA6NEQ2 426 aa10.25□□□□□ -0.77
C9orf3-201ENST00000277198 BTF3P20290 206 aaKnown RBP10.25□□□□□ -0.77
C9orf3-201ENST00000277198 RBPMS2Q6ZRY4 209 aaKnown RBP10.25□□□□□ -0.77
C9orf3-201ENST00000277198 FAM19A2Q8N3H0 131 aa10.25□□□□□ -0.77
C9orf3-201ENST00000277198 OR8B3Q8NGG8 313 aa10.25□□□□□ -0.77
C9orf3-201ENST00000277198 IGFBPL1Q8WX77 278 aa10.25□□□□□ -0.77
C9orf3-201ENST00000277198 CHCHD1Q96BP2 118 aaKnown RBP10.25□□□□□ -0.77
C9orf3-201ENST00000277198 OR8B2Q96RD0 313 aa10.25□□□□□ -0.77
C9orf3-201ENST00000277198 C1RLQ9NZP8 487 aa10.25□□□□□ -0.77
C9orf3-201ENST00000277198 ZANQ9Y493 2812 aa10.24□□□□□ -0.77
C9orf3-201ENST00000277198 VWC2LB2RUY7 222 aa10.24□□□□□ -0.77
C9orf3-201ENST00000277198 I3L2K1 104 aa10.24□□□□□ -0.77
C9orf3-201ENST00000277198 M0R2Z0 102 aa10.24□□□□□ -0.77
C9orf3-201ENST00000277198 CD3EP07766 207 aa10.24□□□□□ -0.77
C9orf3-201ENST00000277198 ZNF25P17030 456 aaPredicted RBP10.24□□□□□ -0.77
C9orf3-201ENST00000277198 HOXB4P17483 251 aaPredicted RBP10.24□□□□□ -0.77
C9orf3-201ENST00000277198 NTF3P20783 257 aa10.24□□□□□ -0.77
C9orf3-201ENST00000277198 FOXA3P55318 350 aaPredicted RBP10.24□□□□□ -0.77
C9orf3-201ENST00000277198 SETD2Q9BYW2 2564 aaPredicted RBP10.24□□□□□ -0.77
C9orf3-201ENST00000277198 DLEU1O43261 78 aa10.23□□□□□ -0.77
C9orf3-201ENST00000277198 PSG1P11464 419 aa10.23□□□□□ -0.77
C9orf3-201ENST00000277198 CAMPP49913 170 aa10.23□□□□□ -0.77
C9orf3-201ENST00000277198 RUSC1-AS1Q66K80 236 aa10.23□□□□□ -0.77
C9orf3-201ENST00000277198 LYPD1Q8N2G4 141 aa10.23□□□□□ -0.77
C9orf3-201ENST00000277198 SRSF12Q8WXF0 261 aaKnown RBP10.23□□□□□ -0.77
C9orf3-201ENST00000277198 RPEQ96AT9 228 aa10.23□□□□□ -0.77
C9orf3-201ENST00000277198 SLC25A39Q9BZJ4 359 aaPredicted RBP10.23□□□□□ -0.77
C9orf3-201ENST00000277198 LY6LH3BQJ8 138 aa10.23□□□□□ -0.77
C9orf3-201ENST00000277198 CRXO43186 299 aaPredicted RBP10.23□□□□□ -0.77
C9orf3-201ENST00000277198 ZNF672Q499Z4 452 aaPredicted RBP10.23□□□□□ -0.77
C9orf3-201ENST00000277198 C16orf54Q6UWD8 224 aa10.23□□□□□ -0.77
C9orf3-201ENST00000277198 S100A7AQ86SG5 101 aa10.23□□□□□ -0.77
C9orf3-201ENST00000277198 RASL11BQ9BPW5 248 aa10.23□□□□□ -0.77
C9orf3-201ENST00000277198 NDFIP1Q9BT67 221 aa10.23□□□□□ -0.77
C9orf3-201ENST00000277198 TMEM208Q9BTX3 173 aa10.23□□□□□ -0.77
C9orf3-201ENST00000277198 MRPS16Q9Y3D3 137 aaKnown RBP10.23□□□□□ -0.77
C9orf3-201ENST00000277198 TRAV9-2A0A087WT02 112 aa10.22□□□□□ -0.77
C9orf3-201ENST00000277198 CNTFRP26992 372 aa10.22□□□□□ -0.77
C9orf3-201ENST00000277198 LINC00322Q6ZN03 302 aaPredicted RBP10.22□□□□□ -0.77
C9orf3-201ENST00000277198 Q86TA4 180 aa10.22□□□□□ -0.77
C9orf3-201ENST00000277198 OR2D3Q8NGH3 330 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms