RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 ABCA4P78363 2273 aa9.92□□□□□ -0.82
SPG11-201ENST00000261866 MGST2Q99735 147 aa9.92□□□□□ -0.82
SPG11-201ENST00000261866 XCL2Q9UBD3 114 aa9.92□□□□□ -0.82
SPG11-201ENST00000261866 SPTBN1Q01082 2364 aaKnown RBP9.92□□□□□ -0.82
SPG11-201ENST00000261866 GRNP28799 593 aaKnown RBP9.91□□□□□ -0.82
SPG11-201ENST00000261866 VWA8A3KMH1 1905 aa9.91□□□□□ -0.82
SPG11-201ENST00000261866 TRAV8-4A0A0B4J246 113 aa9.91□□□□□ -0.82
SPG11-201ENST00000261866 G3V318 75 aa9.91□□□□□ -0.82
SPG11-201ENST00000261866 TRAV13-1A0A0B4J241 112 aa9.91□□□□□ -0.82
SPG11-201ENST00000261866 PCP4P48539 62 aa9.91□□□□□ -0.82
SPG11-201ENST00000261866 FREM3P0C091 2139 aa9.91□□□□□ -0.82
SPG11-201ENST00000261866 GGTLC3B5MD39 225 aa9.91□□□□□ -0.82
SPG11-201ENST00000261866 RHPN1-AS1Q9BWJ2 59 aa9.91□□□□□ -0.82
SPG11-201ENST00000261866 SLC25A16P16260 332 aa9.91□□□□□ -0.82
SPG11-201ENST00000261866 CR1LQ2VPA4 569 aa9.91□□□□□ -0.82
SPG11-201ENST00000261866 CLPSL2Q6UWE3 100 aa9.91□□□□□ -0.82
SPG11-201ENST00000261866 HOXD3P31249 432 aaPredicted RBP9.91□□□□□ -0.82
SPG11-201ENST00000261866 DEFB131AP59861 70 aa9.91□□□□□ -0.82
SPG11-201ENST00000261866 MCRIP2Q9BUT9 160 aaKnown RBP9.91□□□□□ -0.82
SPG11-201ENST00000261866 TRAV8-1A0A0A6YYK1 113 aa9.9□□□□□ -0.82
SPG11-201ENST00000261866 HOXA3O43365 443 aaPredicted RBP9.9□□□□□ -0.82
SPG11-201ENST00000261866 ZNF876PQ49A33 203 aa9.9□□□□□ -0.82
SPG11-201ENST00000261866 FNDC1Q4ZHG4 1894 aaPredicted RBP9.9□□□□□ -0.82
SPG11-201ENST00000261866 SERF1AO75920 110 aa9.9□□□□□ -0.82
SPG11-201ENST00000261866 NRGNQ92686 78 aa9.9□□□□□ -0.82
SPG11-201ENST00000261866 OVOL1O14753 267 aa9.9□□□□□ -0.82
SPG11-201ENST00000261866 TOMM40O96008 361 aa9.9□□□□□ -0.82
SPG11-201ENST00000261866 GVINP1Q7Z2Y8 2422 aa9.9□□□□□ -0.82
SPG11-201ENST00000261866 CACNA1BQ00975 2339 aa9.9□□□□□ -0.82
SPG11-201ENST00000261866 ATP6V0E1O15342 81 aa9.9□□□□□ -0.82
SPG11-201ENST00000261866 LY6G6FQ5SQ64 297 aa9.9□□□□□ -0.82
SPG11-201ENST00000261866 Q6P435 159 aa9.9□□□□□ -0.82
SPG11-201ENST00000261866 ZNF98A6NK75 572 aa9.9□□□□□ -0.82
SPG11-201ENST00000261866 IGHG3P01860 377 aa9.9□□□□□ -0.83
SPG11-201ENST00000261866 MINOS1Q5TGZ0 78 aa9.9□□□□□ -0.83
SPG11-201ENST00000261866 DTX2Q86UW9 622 aa9.9□□□□□ -0.83
SPG11-201ENST00000261866 CLDN16Q9Y5I7 305 aa9.9□□□□□ -0.83
SPG11-201ENST00000261866 MINOS1-NBL1R4GNA1 71 aa9.9□□□□□ -0.83
SPG11-201ENST00000261866 ATRAIDQ6UW56 229 aa9.89□□□□□ -0.83
SPG11-201ENST00000261866 KLK9Q9UKQ9 250 aa9.89□□□□□ -0.83
SPG11-201ENST00000261866 SIGLEC9Q9Y336 463 aa9.89□□□□□ -0.83
SPG11-201ENST00000261866 DKK1O94907 266 aa9.89□□□□□ -0.83
SPG11-201ENST00000261866 C1orf159Q96HA4 380 aa9.89□□□□□ -0.83
SPG11-201ENST00000261866 PEF1Q9UBV8 284 aaKnown RBP9.89□□□□□ -0.83
SPG11-201ENST00000261866 SMKR1H3BMG3 65 aa9.89□□□□□ -0.83
SPG11-201ENST00000261866 SRSF1Q07955 248 aaKnown RBP eCLIP9.89□□□□□ -0.832e-7■■■■□ 21.9
SPG11-201ENST00000261866 ZNF114Q8NC26 417 aa9.89□□□□□ -0.83
SPG11-201ENST00000261866 TNFRSF14Q92956 283 aa9.89□□□□□ -0.83
SPG11-201ENST00000261866 M0R1W7 72 aa9.89□□□□□ -0.83
SPG11-201ENST00000261866 FAM120AOSQ5T036 256 aa9.89□□□□□ -0.83
SPG11-201ENST00000261866 NDUFS7O75251 213 aa9.89□□□□□ -0.83
SPG11-201ENST00000261866 IGKV1-5P01602 117 aa9.89□□□□□ -0.83
SPG11-201ENST00000261866 C14orf178Q8N769 122 aaPredicted RBP9.89□□□□□ -0.83
SPG11-201ENST00000261866 ZNF562Q6V9R5 426 aa9.89□□□□□ -0.83
SPG11-201ENST00000261866 M0R2P5 195 aa9.88□□□□□ -0.83
SPG11-201ENST00000261866 TRBV7-1A0A0A6YYK4 115 aa9.88□□□□□ -0.83
SPG11-201ENST00000261866 GGTLC1Q9BX51 225 aa9.88□□□□□ -0.83
SPG11-201ENST00000261866 A0A1B0GWJ7 208 aa9.88□□□□□ -0.83
SPG11-201ENST00000261866 LCN12Q6JVE5 192 aa9.88□□□□□ -0.83
SPG11-201ENST00000261866 NCOR1O75376 2440 aa9.88□□□□□ -0.83
SPG11-201ENST00000261866 LYZL1Q6UWQ5 148 aa9.88□□□□□ -0.83
SPG11-201ENST00000261866 ZNF503-AS2A6NEH8 195 aa9.88□□□□□ -0.83
SPG11-201ENST00000261866 SH2D1AO60880 128 aa9.88□□□□□ -0.83
SPG11-201ENST00000261866 TMEM86BQ8N661 226 aa9.88□□□□□ -0.83
SPG11-201ENST00000261866 RNF114Q9Y508 228 aa9.88□□□□□ -0.83
SPG11-201ENST00000261866 LRRK1Q38SD2 2015 aa9.87□□□□□ -0.83
SPG11-201ENST00000261866 ZNF407Q9C0G0 2248 aa9.87□□□□□ -0.83
SPG11-201ENST00000261866 F5H768 121 aa9.87□□□□□ -0.83
SPG11-201ENST00000261866 FRMPD3Q5JV73 1810 aa9.87□□□□□ -0.83
SPG11-201ENST00000261866 SSBP2P81877 361 aaPredicted RBP9.87□□□□□ -0.83
SPG11-201ENST00000261866 CYSLTR1Q9Y271 337 aa9.87□□□□□ -0.83
SPG11-201ENST00000261866 NTF4P34130 210 aa9.87□□□□□ -0.83
SPG11-201ENST00000261866 D6R8Y8 96 aa9.87□□□□□ -0.83
SPG11-201ENST00000261866 TCF15Q12870 199 aa9.87□□□□□ -0.83
SPG11-201ENST00000261866 C6orf226Q5I0X4 101 aa9.87□□□□□ -0.83
SPG11-201ENST00000261866 SPSB3Q6PJ21 355 aa9.87□□□□□ -0.83
SPG11-201ENST00000261866 NIT1Q86X76 327 aa9.87□□□□□ -0.83
SPG11-201ENST00000261866 MGAMO43451 1857 aa9.86□□□□□ -0.83
SPG11-201ENST00000261866 TRAV12-2A0A075B6T6 113 aa9.86□□□□□ -0.83
SPG11-201ENST00000261866 CLPSL1A2RUU4 121 aa9.86□□□□□ -0.83
SPG11-201ENST00000261866 NDUFS5O43920 106 aa9.86□□□□□ -0.83
SPG11-201ENST00000261866 SPINK13Q1W4C9 94 aa9.86□□□□□ -0.83
SPG11-201ENST00000261866 ABCA1O95477 2261 aa9.86□□□□□ -0.83
SPG11-201ENST00000261866 F8WEM9 126 aa9.86□□□□□ -0.83
SPG11-201ENST00000261866 OCIAD2Q56VL3 154 aa9.86□□□□□ -0.83
SPG11-201ENST00000261866 ASPHD1Q5U4P2 390 aa9.86□□□□□ -0.83
SPG11-201ENST00000261866 ANAPC13Q9BS18 74 aa9.86□□□□□ -0.83
SPG11-201ENST00000261866 ANAPC10Q9UM13 185 aa9.86□□□□□ -0.83
SPG11-201ENST00000261866 TRAV25A0A0B4J276 109 aa9.85□□□□□ -0.83
SPG11-201ENST00000261866 STAG3L3P0CL85 134 aa9.85□□□□□ -0.83
SPG11-201ENST00000261866 ID3Q02535 119 aa9.85□□□□□ -0.83
SPG11-201ENST00000261866 GSN-AS1Q9NRJ2 163 aa9.85□□□□□ -0.83
SPG11-201ENST00000261866 A0A0G2JRQ6 117 aa9.85□□□□□ -0.83
SPG11-201ENST00000261866 ESDP10768 282 aa9.85□□□□□ -0.83
SPG11-201ENST00000261866 ORAOV1Q8WV07 137 aa9.85□□□□□ -0.83
SPG11-201ENST00000261866 RNF166Q96A37 237 aaPredicted RBP9.85□□□□□ -0.83
SPG11-201ENST00000261866 NRN1Q9NPD7 142 aa9.85□□□□□ -0.83
SPG11-201ENST00000261866 CNOT1A5YKK6 2376 aaKnown RBP9.85□□□□□ -0.83
SPG11-201ENST00000261866 A8MXK9 166 aa9.85□□□□□ -0.83
SPG11-201ENST00000261866 TRAV8-3A0A0A6YYJ7 113 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms