RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 GOLT1AQ6ZVE7 132 aa16.98■□□□□ 0.31
CLN6-201ENST00000249806 OR4F17Q8NGA8 305 aa16.98■□□□□ 0.31
CLN6-201ENST00000249806 OR5R1Q8NH85 324 aa16.98■□□□□ 0.31
CLN6-201ENST00000249806 THYN1Q9P016 225 aa16.98■□□□□ 0.31
CLN6-201ENST00000249806 CENPVL3A0A0U1RRI6 287 aa16.97■□□□□ 0.31
CLN6-201ENST00000249806 SH2D7A6NKC9 451 aaPredicted RBP16.97■□□□□ 0.31
CLN6-201ENST00000249806 SERF1AO75920 110 aa16.97■□□□□ 0.31
CLN6-201ENST00000249806 SMIM12Q96EX1 92 aa16.97■□□□□ 0.31
CLN6-201ENST00000249806 NEU1Q99519 415 aa16.97■□□□□ 0.31
CLN6-201ENST00000249806 TMUB1Q9BVT8 246 aa16.97■□□□□ 0.31
CLN6-201ENST00000249806 NPFFO15130 113 aa16.97■□□□□ 0.31
CLN6-201ENST00000249806 MRPS12O15235 138 aaKnown RBP16.97■□□□□ 0.31
CLN6-201ENST00000249806 IGLV2-11P01706 119 aa16.97■□□□□ 0.31
CLN6-201ENST00000249806 HLA-DRB1P01911 266 aa16.97■□□□□ 0.31
CLN6-201ENST00000249806 TSKUQ8WUA8 353 aa16.97■□□□□ 0.31
CLN6-201ENST00000249806 ZNF48Q96MX3 618 aaPredicted RBP16.97■□□□□ 0.31
CLN6-201ENST00000249806 CELSR2Q9HCU4 2923 aa16.97■□□□□ 0.31
CLN6-201ENST00000249806 IGHV3OR16-10A0A075B7F0 116 aa16.96■□□□□ 0.31
CLN6-201ENST00000249806 TRAV20A0A0B4J274 112 aa16.96■□□□□ 0.31
CLN6-201ENST00000249806 HIGD1CA8MV81 97 aa16.96■□□□□ 0.31
CLN6-201ENST00000249806 VWC2LB2RUY7 222 aa16.96■□□□□ 0.31
CLN6-201ENST00000249806 BAGE3Q86Y29 109 aa16.96■□□□□ 0.31
CLN6-201ENST00000249806 ZNF331Q9NQX6 463 aaPredicted RBP16.96■□□□□ 0.31
CLN6-201ENST00000249806 FBXL7Q9UJT9 491 aa16.96■□□□□ 0.31
CLN6-201ENST00000249806 LINC01548A6NM66 108 aa16.96■□□□□ 0.3
CLN6-201ENST00000249806 ECSCRQ19T08 205 aa16.96■□□□□ 0.3
CLN6-201ENST00000249806 SIGLEC15Q6ZMC9 328 aa16.96■□□□□ 0.3
CLN6-201ENST00000249806 PRNTQ86SH4 94 aa16.96■□□□□ 0.3
CLN6-201ENST00000249806 CIARTQ8N365 385 aaPredicted RBP16.96■□□□□ 0.3
CLN6-201ENST00000249806 PRO1933Q9H354 126 aa16.96■□□□□ 0.3
CLN6-201ENST00000249806 GNB4Q9HAV0 340 aa16.96■□□□□ 0.3
CLN6-201ENST00000249806 CTSGP08311 255 aa16.95■□□□□ 0.3
CLN6-201ENST00000249806 COX19Q49B96 90 aa16.95■□□□□ 0.3
CLN6-201ENST00000249806 DOPEY1Q5JWR5 2465 aa16.95■□□□□ 0.3
CLN6-201ENST00000249806 ZNF414Q96IQ9 312 aa16.95■□□□□ 0.3
CLN6-201ENST00000249806 ASCL2Q99929 193 aa16.95■□□□□ 0.3
CLN6-201ENST00000249806 CHRDL1Q9BU40 450 aa16.95■□□□□ 0.3
CLN6-201ENST00000249806 BMPR1BO00238 502 aa16.94■□□□□ 0.3
CLN6-201ENST00000249806 ATP6V0E1O15342 81 aa16.94■□□□□ 0.3
CLN6-201ENST00000249806 HLA-DQA1P01909 254 aa16.94■□□□□ 0.3
CLN6-201ENST00000249806 Q0VG73 95 aa16.94■□□□□ 0.3
CLN6-201ENST00000249806 GDF5OSQ5U4N7 250 aa16.94■□□□□ 0.3
CLN6-201ENST00000249806 UNQ5815/PRO19632Q6UWF5 114 aa16.94■□□□□ 0.3
CLN6-201ENST00000249806 TCF24Q7RTU0 167 aa16.94■□□□□ 0.3
CLN6-201ENST00000249806 Q86TA4 180 aa16.94■□□□□ 0.3
CLN6-201ENST00000249806 PRSS22Q9GZN4 317 aa16.94■□□□□ 0.3
CLN6-201ENST00000249806 CSMD2Q7Z408 3487 aa16.94■□□□□ 0.3
CLN6-201ENST00000249806 IGHV3-35A0A0C4DH35 117 aa16.94■□□□□ 0.3
CLN6-201ENST00000249806 IGHV4-61A0A0C4DH41 118 aa16.94■□□□□ 0.3
CLN6-201ENST00000249806 SLAQ13239 276 aa16.94■□□□□ 0.3
CLN6-201ENST00000249806 CCL19Q99731 98 aa16.94■□□□□ 0.3
CLN6-201ENST00000249806 C19orf71A6NCJ1 209 aa16.93■□□□□ 0.3
CLN6-201ENST00000249806 RNF224P0DH78 156 aa16.93■□□□□ 0.3
CLN6-201ENST00000249806 CD33P20138 364 aa16.93■□□□□ 0.3
CLN6-201ENST00000249806 RPP21Q9H633 154 aaKnown RBP16.93■□□□□ 0.3
CLN6-201ENST00000249806 RNF24Q9Y225 148 aa16.93■□□□□ 0.3
CLN6-201ENST00000249806 IGHV3OR16-8A0A075B7F1 116 aa16.93■□□□□ 0.3
CLN6-201ENST00000249806 MS4A10Q96PG2 267 aa16.93■□□□□ 0.3
CLN6-201ENST00000249806 M0R3E3 92 aa16.92■□□□□ 0.3
CLN6-201ENST00000249806 P01737 135 aa16.92■□□□□ 0.3
CLN6-201ENST00000249806 APCSP02743 223 aa16.92■□□□□ 0.3
CLN6-201ENST00000249806 SRIP30626 198 aa16.92■□□□□ 0.3
CLN6-201ENST00000249806 MYO18BQ8IUG5 2567 aa16.92■□□□□ 0.3
CLN6-201ENST00000249806 G3V318 75 aa16.92■□□□□ 0.3
CLN6-201ENST00000249806 ESDP10768 282 aa16.92■□□□□ 0.3
CLN6-201ENST00000249806 PAX8Q06710 450 aa16.92■□□□□ 0.3
CLN6-201ENST00000249806 PRR31Q5SQ13 230 aa16.92■□□□□ 0.3
CLN6-201ENST00000249806 WIPF2Q8TF74 440 aaPredicted RBP16.92■□□□□ 0.3
CLN6-201ENST00000249806 CAMPP49913 170 aa16.91■□□□□ 0.3
CLN6-201ENST00000249806 C15orf32Q32M92 178 aa16.91■□□□□ 0.3
CLN6-201ENST00000249806 GTSF1Q8WW33 167 aa16.91■□□□□ 0.3
CLN6-201ENST00000249806 DAZAP1Q96EP5 407 aaKnown RBP16.91■□□□□ 0.3
CLN6-201ENST00000249806 POLR3KQ9Y2Y1 108 aaPredicted RBP16.91■□□□□ 0.3
CLN6-201ENST00000249806 TMEM8BA6NDV4 472 aa16.9■□□□□ 0.3
CLN6-201ENST00000249806 BRD3OSQ6XYD6 125 aa16.9■□□□□ 0.3
CLN6-201ENST00000249806 TMEM219Q86XT9 240 aa16.9■□□□□ 0.3
CLN6-201ENST00000249806 FAM110DQ8TAY7 271 aaPredicted RBP16.9■□□□□ 0.3
CLN6-201ENST00000249806 RCHY1Q96PM5 261 aa16.9■□□□□ 0.3
CLN6-201ENST00000249806 PIMREGQ9BSJ6 248 aa16.9■□□□□ 0.3
CLN6-201ENST00000249806 SSBP4Q9BWG4 385 aaPredicted RBP16.9■□□□□ 0.3
CLN6-201ENST00000249806 ZNF492Q9P255 531 aa16.9■□□□□ 0.3
CLN6-201ENST00000249806 ZNF785A8K8V0 405 aa16.9■□□□□ 0.3
CLN6-201ENST00000249806 TPPP2P59282 170 aa16.9■□□□□ 0.3
CLN6-201ENST00000249806 PKIAP61925 76 aa16.9■□□□□ 0.3
CLN6-201ENST00000249806 LYPD1Q8N2G4 141 aa16.9■□□□□ 0.3
CLN6-201ENST00000249806 ZNF664Q8N3J9 261 aa16.9■□□□□ 0.3
CLN6-201ENST00000249806 ZNF253O75346 499 aa16.89■□□□□ 0.29
CLN6-201ENST00000249806 SCGB1D1O95968 90 aa16.89■□□□□ 0.29
CLN6-201ENST00000249806 RASL11AQ6T310 242 aa16.89■□□□□ 0.29
CLN6-201ENST00000249806 A8MWL6 223 aa16.89■□□□□ 0.29
CLN6-201ENST00000249806 GPR183P32249 361 aa16.89■□□□□ 0.29
CLN6-201ENST00000249806 PAFAH1B2P68402 229 aa16.89■□□□□ 0.29
CLN6-201ENST00000249806 RHOGP84095 191 aa16.89■□□□□ 0.29
CLN6-201ENST00000249806 OR10J3Q5JRS4 329 aa16.89■□□□□ 0.29
CLN6-201ENST00000249806 Q6ZWC4 215 aa16.89■□□□□ 0.29
CLN6-201ENST00000249806 C10orf105Q8TEF2 133 aa16.89■□□□□ 0.29
CLN6-201ENST00000249806 ZFYVE26Q68DK2 2539 aa16.89■□□□□ 0.29
CLN6-201ENST00000249806 DIRC3C9JPN6 131 aa16.88■□□□□ 0.29
CLN6-201ENST00000249806 COL8A1P27658 744 aa16.88■□□□□ 0.29
CLN6-201ENST00000249806 S100A7AQ86SG5 101 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms