RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 ATP6V0BQ99437 205 aa17.89■□□□□ 0.45
HOXD9-201ENST00000249499 MLST8Q9BVC4 326 aa17.89■□□□□ 0.45
HOXD9-201ENST00000249499 LTAP01374 205 aa17.88■□□□□ 0.45
HOXD9-201ENST00000249499 ECSCRQ19T08 205 aa17.88■□□□□ 0.45
HOXD9-201ENST00000249499 CMTM2Q8TAZ6 248 aa17.88■□□□□ 0.45
HOXD9-201ENST00000249499 ZNF502Q8TBZ5 544 aa17.88■□□□□ 0.45
HOXD9-201ENST00000249499 PIFOQ8TCI5 191 aa17.88■□□□□ 0.45
HOXD9-201ENST00000249499 GPR61Q9BZJ8 451 aa17.88■□□□□ 0.45
HOXD9-201ENST00000249499 C7orf69Q9H7B7 122 aa17.88■□□□□ 0.45
HOXD9-201ENST00000249499 S4R3C0 116 aa17.88■□□□□ 0.45
HOXD9-201ENST00000249499 XKRY2A2RUG3 117 aa17.88■□□□□ 0.45
HOXD9-201ENST00000249499 PCP4L1A6NKN8 68 aa17.88■□□□□ 0.45
HOXD9-201ENST00000249499 ZNF705GA8MUZ8 300 aaPredicted RBP17.88■□□□□ 0.45
HOXD9-201ENST00000249499 SNRPCP09234 159 aaKnown RBP17.88■□□□□ 0.45
HOXD9-201ENST00000249499 COL8A1P27658 744 aa17.88■□□□□ 0.45
HOXD9-201ENST00000249499 GFI1BQ5VTD9 330 aa17.88■□□□□ 0.45
HOXD9-201ENST00000249499 OR8I2Q8N0Y5 310 aa17.88■□□□□ 0.45
HOXD9-201ENST00000249499 GNB1LQ9BYB4 327 aa17.88■□□□□ 0.45
HOXD9-201ENST00000249499 TRAV20A0A0B4J274 112 aa17.87■□□□□ 0.45
HOXD9-201ENST00000249499 MT-ND6P03923 174 aa17.87■□□□□ 0.45
HOXD9-201ENST00000249499 HIST2H2BCQ6DN03 193 aa17.87■□□□□ 0.45
HOXD9-201ENST00000249499 MBD6Q96DN6 1003 aa17.87■□□□□ 0.45
HOXD9-201ENST00000249499 GATCO43716 136 aaKnown RBP17.86■□□□□ 0.45
HOXD9-201ENST00000249499 C15orf32Q32M92 178 aa17.86■□□□□ 0.45
HOXD9-201ENST00000249499 WDR73Q6P4I2 378 aa17.86■□□□□ 0.45
HOXD9-201ENST00000249499 GRAMD2BQ96HH9 432 aa17.86■□□□□ 0.45
HOXD9-201ENST00000249499 OR2T8A6NH00 312 aa17.86■□□□□ 0.45
HOXD9-201ENST00000249499 RHOGP84095 191 aa17.86■□□□□ 0.45
HOXD9-201ENST00000249499 SIGLEC15Q6ZMC9 328 aa17.86■□□□□ 0.45
HOXD9-201ENST00000249499 ARL6IP6Q8N6S5 226 aa17.86■□□□□ 0.45
HOXD9-201ENST00000249499 NHLRC2Q8NBF2 726 aa17.86■□□□□ 0.45
HOXD9-201ENST00000249499 ZNF492Q9P255 531 aa17.86■□□□□ 0.45
HOXD9-201ENST00000249499 SETXQ7Z333 2677 aaKnown RBP17.86■□□□□ 0.45
HOXD9-201ENST00000249499 ABCA1O95477 2261 aa17.85■□□□□ 0.45
HOXD9-201ENST00000249499 RPL7P18124 248 aaKnown RBP17.85■□□□□ 0.45
HOXD9-201ENST00000249499 ZNF414Q96IQ9 312 aa17.85■□□□□ 0.45
HOXD9-201ENST00000249499 SERTAD4Q9NUC0 356 aa17.85■□□□□ 0.45
HOXD9-201ENST00000249499 H3BTX0 84 aa17.84■□□□□ 0.45
HOXD9-201ENST00000249499 BMPR1BO00238 502 aa17.84■□□□□ 0.45
HOXD9-201ENST00000249499 ADMP35318 185 aa17.84■□□□□ 0.45
HOXD9-201ENST00000249499 C19orf54Q5BKX5 351 aa17.84■□□□□ 0.45
HOXD9-201ENST00000249499 PDZD11Q5EBL8 140 aa17.84■□□□□ 0.45
HOXD9-201ENST00000249499 RASL11AQ6T310 242 aa17.84■□□□□ 0.45
HOXD9-201ENST00000249499 BRD3OSQ6XYD6 125 aa17.84■□□□□ 0.45
HOXD9-201ENST00000249499 NUDT10Q8NFP7 164 aa17.84■□□□□ 0.45
HOXD9-201ENST00000249499 NUDT11Q96G61 164 aa17.84■□□□□ 0.45
HOXD9-201ENST00000249499 NIT2Q9NQR4 276 aa17.84■□□□□ 0.45
HOXD9-201ENST00000249499 RABAC1Q9UI14 185 aa17.84■□□□□ 0.45
HOXD9-201ENST00000249499 ABCA2Q9BZC7 2435 aa17.84■□□□□ 0.45
HOXD9-201ENST00000249499 IGHV3OR16-10A0A075B7F0 116 aa17.84■□□□□ 0.45
HOXD9-201ENST00000249499 TRBV7-1A0A0A6YYK4 115 aa17.84■□□□□ 0.45
HOXD9-201ENST00000249499 IZUMO1RA6ND01 250 aa17.84■□□□□ 0.45
HOXD9-201ENST00000249499 RAB9AP51151 201 aa17.84■□□□□ 0.45
HOXD9-201ENST00000249499 CT83Q5H943 113 aa17.84■□□□□ 0.45
HOXD9-201ENST00000249499 OR10D4PQ8NGN7 298 aa17.84■□□□□ 0.45
HOXD9-201ENST00000249499 RPH3ALQ9UNE2 315 aa17.84■□□□□ 0.45
HOXD9-201ENST00000249499 K7EQM0 130 aa17.83■□□□□ 0.44
HOXD9-201ENST00000249499 M0QZK8 103 aa17.83■□□□□ 0.44
HOXD9-201ENST00000249499 IGHV4-38-2P0DP08 117 aa17.83■□□□□ 0.44
HOXD9-201ENST00000249499 FABP4P15090 132 aa17.83■□□□□ 0.44
HOXD9-201ENST00000249499 TMEM75Q8N9X5 138 aa17.83■□□□□ 0.44
HOXD9-201ENST00000249499 EEF1AKMT3Q96AZ1 226 aa17.83■□□□□ 0.44
HOXD9-201ENST00000249499 SERTM2A0A1B0GWG4 89 aa17.82■□□□□ 0.44
HOXD9-201ENST00000249499 IGHV3-23P01764 117 aa17.82■□□□□ 0.44
HOXD9-201ENST00000249499 AMY1AP04745 511 aa17.82■□□□□ 0.44
HOXD9-201ENST00000249499 Q86TA4 180 aa17.82■□□□□ 0.44
HOXD9-201ENST00000249499 EXOC3-AS1Q8N2X6 119 aa17.82■□□□□ 0.44
HOXD9-201ENST00000249499 HIST1H2BLQ99880 126 aa17.82■□□□□ 0.44
HOXD9-201ENST00000249499 HIF1ANQ9NWT6 349 aa17.82■□□□□ 0.44
HOXD9-201ENST00000249499 BRI3O95415 125 aa17.82■□□□□ 0.44
HOXD9-201ENST00000249499 PSG9Q00887 426 aa17.82■□□□□ 0.44
HOXD9-201ENST00000249499 TSKUQ8WUA8 353 aa17.82■□□□□ 0.44
HOXD9-201ENST00000249499 MRPL18Q9H0U6 180 aaKnown RBP17.82■□□□□ 0.44
HOXD9-201ENST00000249499 TRAV41A0A0B4J266 112 aa17.81■□□□□ 0.44
HOXD9-201ENST00000249499 FAM223BA6NKX1 122 aa17.81■□□□□ 0.44
HOXD9-201ENST00000249499 G3V318 75 aa17.81■□□□□ 0.44
HOXD9-201ENST00000249499 ZNF253O75346 499 aa17.81■□□□□ 0.44
HOXD9-201ENST00000249499 CBLN1P23435 193 aa17.81■□□□□ 0.44
HOXD9-201ENST00000249499 TMEM219Q86XT9 240 aa17.81■□□□□ 0.44
HOXD9-201ENST00000249499 FAM223AQ8IWN6 122 aa17.81■□□□□ 0.44
HOXD9-201ENST00000249499 WIPF2Q8TF74 440 aaPredicted RBP17.81■□□□□ 0.44
HOXD9-201ENST00000249499 PRSS22Q9GZN4 317 aa17.81■□□□□ 0.44
HOXD9-201ENST00000249499 A6NDX4 124 aa17.8■□□□□ 0.44
HOXD9-201ENST00000249499 IGLV2-11P01706 119 aa17.8■□□□□ 0.44
HOXD9-201ENST00000249499 IGF1P05019 195 aa17.8■□□□□ 0.44
HOXD9-201ENST00000249499 GPR183P32249 361 aa17.8■□□□□ 0.44
HOXD9-201ENST00000249499 IER3P46695 156 aa17.8■□□□□ 0.44
HOXD9-201ENST00000249499 DNLZQ5SXM8 178 aa17.8■□□□□ 0.44
HOXD9-201ENST00000249499 PACRGQ96M98 296 aaPredicted RBP17.8■□□□□ 0.44
HOXD9-201ENST00000249499 AAMDCQ9H7C9 122 aa17.8■□□□□ 0.44
HOXD9-201ENST00000249499 NAT8BQ9UHF3 227 aa17.8■□□□□ 0.44
HOXD9-201ENST00000249499 ZFP30Q9Y2G7 519 aa17.8■□□□□ 0.44
HOXD9-201ENST00000249499 C19orf71A6NCJ1 209 aa17.8■□□□□ 0.44
HOXD9-201ENST00000249499 LINC01548A6NM66 108 aa17.8■□□□□ 0.44
HOXD9-201ENST00000249499 SNURFLB1AK76 121 aa17.8■□□□□ 0.44
HOXD9-201ENST00000249499 GOLT1AQ6ZVE7 132 aa17.8■□□□□ 0.44
HOXD9-201ENST00000249499 LINC01356Q8N9X3 169 aa17.8■□□□□ 0.44
HOXD9-201ENST00000249499 C17orf77Q96MU5 243 aa17.8■□□□□ 0.44
HOXD9-201ENST00000249499 HLA-DQA1P01909 254 aa17.79■□□□□ 0.44
HOXD9-201ENST00000249499 PYY3Q5JQD4 70 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms