RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 ATP6V0E1O15342 81 aa14.95□□□□□ -0.02
YBX3-201ENST00000228251 NUPR1O60356 82 aa14.95□□□□□ -0.02
YBX3-201ENST00000228251 JOSD1Q15040 202 aaPredicted RBP14.95□□□□□ -0.02
YBX3-201ENST00000228251 TMEM256Q8N2U0 113 aa14.95□□□□□ -0.02
YBX3-201ENST00000228251 C5orf56Q8N8D9 126 aa14.95□□□□□ -0.02
YBX3-201ENST00000228251 PIFOQ8TCI5 191 aa14.95□□□□□ -0.02
YBX3-201ENST00000228251 SGK494Q96LW2 274 aa14.95□□□□□ -0.02
YBX3-201ENST00000228251 SERTAD4Q9NUC0 356 aa14.95□□□□□ -0.02
YBX3-201ENST00000228251 FBXL7Q9UJT9 491 aa14.95□□□□□ -0.02
YBX3-201ENST00000228251 IGHV1-69DA0A0B4J2H0 117 aa14.94□□□□□ -0.02
YBX3-201ENST00000228251 IGHV1-69P01742 117 aa14.94□□□□□ -0.02
YBX3-201ENST00000228251 AMY1AP04745 511 aa14.94□□□□□ -0.02
YBX3-201ENST00000228251 ESDP10768 282 aa14.94□□□□□ -0.02
YBX3-201ENST00000228251 RPL19P84098 196 aaKnown RBP14.94□□□□□ -0.02
YBX3-201ENST00000228251 Q56UQ5 140 aa14.94□□□□□ -0.02
YBX3-201ENST00000228251 OR4F17Q8NGA8 305 aa14.94□□□□□ -0.02
YBX3-201ENST00000228251 CHRDL1Q9BU40 450 aa14.94□□□□□ -0.02
YBX3-201ENST00000228251 PRDM13Q9H4Q3 707 aa14.94□□□□□ -0.02
YBX3-201ENST00000228251 RPH3ALQ9UNE2 315 aa14.94□□□□□ -0.02
YBX3-201ENST00000228251 VPS13CQ709C8 3753 aa14.94□□□□□ -0.02
YBX3-201ENST00000228251 RASL11AQ6T310 242 aa14.93□□□□□ -0.02
YBX3-201ENST00000228251 ZNF502Q8TBZ5 544 aa14.93□□□□□ -0.02
YBX3-201ENST00000228251 TSKUQ8WUA8 353 aa14.93□□□□□ -0.02
YBX3-201ENST00000228251 ZNF785A8K8V0 405 aa14.93□□□□□ -0.02
YBX3-201ENST00000228251 SLC35B1P78383 322 aa14.93□□□□□ -0.02
YBX3-201ENST00000228251 Q0VG73 95 aa14.93□□□□□ -0.02
YBX3-201ENST00000228251 C19orf54Q5BKX5 351 aa14.93□□□□□ -0.02
YBX3-201ENST00000228251 CT83Q5H943 113 aa14.93□□□□□ -0.02
YBX3-201ENST00000228251 NUP35Q8NFH5 326 aa14.93□□□□□ -0.02
YBX3-201ENST00000228251 TMEM18Q96B42 140 aa14.93□□□□□ -0.02
YBX3-201ENST00000228251 IGHV4-30-2A0A087WSY4 118 aa14.92□□□□□ -0.02
YBX3-201ENST00000228251 GRIFINA4D1Z8 144 aa14.92□□□□□ -0.02
YBX3-201ENST00000228251 OR2T8A6NH00 312 aa14.92□□□□□ -0.02
YBX3-201ENST00000228251 LINC01548A6NM66 108 aa14.92□□□□□ -0.02
YBX3-201ENST00000228251 LINC00587B1AMM8 73 aa14.92□□□□□ -0.02
YBX3-201ENST00000228251 NPIPB6E9PJ23 425 aa14.92□□□□□ -0.02
YBX3-201ENST00000228251 SPINK4O60575 86 aa14.92□□□□□ -0.02
YBX3-201ENST00000228251 IGHV3-23P01764 117 aa14.92□□□□□ -0.02
YBX3-201ENST00000228251 PDE6HQ13956 83 aa14.92□□□□□ -0.02
YBX3-201ENST00000228251 PRR27Q6MZM9 219 aa14.92□□□□□ -0.02
YBX3-201ENST00000228251 C16orf54Q6UWD8 224 aa14.92□□□□□ -0.02
YBX3-201ENST00000228251 UNQ5815/PRO19632Q6UWF5 114 aa14.92□□□□□ -0.02
YBX3-201ENST00000228251 S100A7AQ86SG5 101 aa14.92□□□□□ -0.02
YBX3-201ENST00000228251 OR5R1Q8NH85 324 aa14.92□□□□□ -0.02
YBX3-201ENST00000228251 TRAV8-1A0A0A6YYK1 113 aa14.91□□□□□ -0.02
YBX3-201ENST00000228251 HLA-DQA1P01909 254 aa14.91□□□□□ -0.02
YBX3-201ENST00000228251 GZMBP10144 247 aa14.91□□□□□ -0.02
YBX3-201ENST00000228251 Q71RC1 249 aaPredicted RBP14.91□□□□□ -0.02
YBX3-201ENST00000228251 MEGF9Q9H1U4 602 aa14.91□□□□□ -0.02
YBX3-201ENST00000228251 CRISP2P16562 243 aa14.9□□□□□ -0.02
YBX3-201ENST00000228251 CRIP2P52943 208 aaPredicted RBP14.9□□□□□ -0.02
YBX3-201ENST00000228251 ATP5J2P56134 94 aa14.9□□□□□ -0.02
YBX3-201ENST00000228251 MRPL54Q6P161 138 aaKnown RBP14.9□□□□□ -0.02
YBX3-201ENST00000228251 CLEC2AQ6UVW9 174 aa14.9□□□□□ -0.02
YBX3-201ENST00000228251 GOLT1AQ6ZVE7 132 aa14.9□□□□□ -0.02
YBX3-201ENST00000228251 TMEM75Q8N9X5 138 aa14.9□□□□□ -0.02
YBX3-201ENST00000228251 NEU1Q99519 415 aa14.9□□□□□ -0.02
YBX3-201ENST00000228251 TMUB1Q9BVT8 246 aa14.9□□□□□ -0.02
YBX3-201ENST00000228251 RPP21Q9H633 154 aaKnown RBP14.9□□□□□ -0.02
YBX3-201ENST00000228251 NAT8BQ9UHF3 227 aa14.9□□□□□ -0.02
YBX3-201ENST00000228251 A0A1B0GXF2 115 aa14.9□□□□□ -0.02
YBX3-201ENST00000228251 ECSCRQ19T08 205 aa14.9□□□□□ -0.02
YBX3-201ENST00000228251 GDF5OSQ5U4N7 250 aa14.9□□□□□ -0.02
YBX3-201ENST00000228251 CMTM2Q8TAZ6 248 aa14.9□□□□□ -0.02
YBX3-201ENST00000228251 BMPR1BO00238 502 aa14.89□□□□□ -0.03
YBX3-201ENST00000228251 PAX1P15863 534 aa14.89□□□□□ -0.03
YBX3-201ENST00000228251 RHOGP84095 191 aa14.89□□□□□ -0.03
YBX3-201ENST00000228251 C15orf32Q32M92 178 aa14.89□□□□□ -0.03
YBX3-201ENST00000228251 CACNA1BQ00975 2339 aa14.89□□□□□ -0.03
YBX3-201ENST00000228251 SH2D7A6NKC9 451 aaPredicted RBP14.88□□□□□ -0.03
YBX3-201ENST00000228251 HIGD1CA8MV81 97 aa14.88□□□□□ -0.03
YBX3-201ENST00000228251 G3V318 75 aa14.88□□□□□ -0.03
YBX3-201ENST00000228251 CCDC140Q96MF4 163 aa14.88□□□□□ -0.03
YBX3-201ENST00000228251 ZFAND3Q9H8U3 227 aa14.88□□□□□ -0.03
YBX3-201ENST00000228251 MOB4Q9Y3A3 225 aa14.88□□□□□ -0.03
YBX3-201ENST00000228251 UTP20O75691 2785 aaKnown RBP14.88□□□□□ -0.03
YBX3-201ENST00000228251 CELSR2Q9HCU4 2923 aa14.88□□□□□ -0.03
YBX3-201ENST00000228251 MYO18BQ8IUG5 2567 aa14.88□□□□□ -0.03
YBX3-201ENST00000228251 IGHV3OR16-10A0A075B7F0 116 aa14.88□□□□□ -0.03
YBX3-201ENST00000228251 TRAV40A0A0B4J280 105 aa14.88□□□□□ -0.03
YBX3-201ENST00000228251 DIRC3C9JPN6 131 aa14.88□□□□□ -0.03
YBX3-201ENST00000228251 F2Z2F3 143 aa14.88□□□□□ -0.03
YBX3-201ENST00000228251 CTAG1AP78358 180 aa14.88□□□□□ -0.03
YBX3-201ENST00000228251 ATP5L2Q7Z4Y8 100 aa14.88□□□□□ -0.03
YBX3-201ENST00000228251 GTSF1Q8WW33 167 aa14.88□□□□□ -0.03
YBX3-201ENST00000228251 CELSR1Q9NYQ6 3014 aa14.87□□□□□ -0.03
YBX3-201ENST00000228251 SCGB2A1O75556 95 aa14.87□□□□□ -0.03
YBX3-201ENST00000228251 SERF1AO75920 110 aa14.87□□□□□ -0.03
YBX3-201ENST00000228251 IGHV4-38-2P0DP08 117 aa14.87□□□□□ -0.03
YBX3-201ENST00000228251 BRD3OSQ6XYD6 125 aa14.87□□□□□ -0.03
YBX3-201ENST00000228251 CIARTQ8N365 385 aaPredicted RBP14.87□□□□□ -0.03
YBX3-201ENST00000228251 ARL6IP6Q8N6S5 226 aa14.87□□□□□ -0.03
YBX3-201ENST00000228251 BBC3Q96PG8 261 aaPredicted RBP14.87□□□□□ -0.03
YBX3-201ENST00000228251 GFRA4Q9GZZ7 299 aa14.87□□□□□ -0.03
YBX3-201ENST00000228251 GNB4Q9HAV0 340 aa14.87□□□□□ -0.03
YBX3-201ENST00000228251 SMAD5-AS1Q9Y6J3 95 aa14.87□□□□□ -0.03
YBX3-201ENST00000228251 UBR5O95071 2799 aaPredicted RBP14.86□□□□□ -0.03
YBX3-201ENST00000228251 SLAQ13239 276 aa14.86□□□□□ -0.03
YBX3-201ENST00000228251 PSG3Q16557 428 aa14.86□□□□□ -0.03
YBX3-201ENST00000228251 OR10J3Q5JRS4 329 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms