RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 FAM90A2PQ658T7 463 aa10.63□□□□□ -0.71
SEC61B-201ENST00000223641 LEMD1Q68G75 181 aa10.63□□□□□ -0.71
SEC61B-201ENST00000223641 ZNF767PQ75MW2 155 aa10.63□□□□□ -0.71
SEC61B-201ENST00000223641 SPATA3Q8NHX4 192 aa10.63□□□□□ -0.71
SEC61B-201ENST00000223641 LRRC20Q8TCA0 184 aa10.63□□□□□ -0.71
SEC61B-201ENST00000223641 SAT2Q96F10 170 aaPredicted RBP10.63□□□□□ -0.71
SEC61B-201ENST00000223641 ZNF503Q96F45 646 aa10.63□□□□□ -0.71
SEC61B-201ENST00000223641 NARS2Q96I59 477 aaKnown RBP10.63□□□□□ -0.71
SEC61B-201ENST00000223641 SLC25A2Q9BXI2 301 aa10.63□□□□□ -0.71
SEC61B-201ENST00000223641 TMEM231Q9H6L2 316 aa10.63□□□□□ -0.71
SEC61B-201ENST00000223641 SLC25A22Q9H936 323 aa10.63□□□□□ -0.71
SEC61B-201ENST00000223641 UBQLN2Q9UHD9 624 aa10.63□□□□□ -0.71
SEC61B-201ENST00000223641 IGHV3-49A0A0A0MS15 119 aa10.62□□□□□ -0.71
SEC61B-201ENST00000223641 TAS2R45P59539 299 aa10.62□□□□□ -0.71
SEC61B-201ENST00000223641 FAM213BQ8TBF2 198 aa10.62□□□□□ -0.71
SEC61B-201ENST00000223641 GPR82Q96P67 336 aa10.62□□□□□ -0.71
SEC61B-201ENST00000223641 ELOVL1Q9BW60 279 aa10.62□□□□□ -0.71
SEC61B-201ENST00000223641 TMEM14CQ9P0S9 112 aa10.62□□□□□ -0.71
SEC61B-201ENST00000223641 MLXQ9UH92 298 aa10.62□□□□□ -0.71
SEC61B-201ENST00000223641 IGHV3OR16-13A0A075B7E8 117 aa10.61□□□□□ -0.71
SEC61B-201ENST00000223641 IGHV3-74A0A0B4J1X5 117 aa10.61□□□□□ -0.71
SEC61B-201ENST00000223641 TRAV1-1A0A0B4J248 108 aa10.61□□□□□ -0.71
SEC61B-201ENST00000223641 IGHV3-66A0A0C4DH42 116 aa10.61□□□□□ -0.71
SEC61B-201ENST00000223641 RGS13O14921 159 aa10.61□□□□□ -0.71
SEC61B-201ENST00000223641 EIF3GO75821 320 aaKnown RBP eCLIP10.61□□□□□ -0.71
SEC61B-201ENST00000223641 GP9P14770 177 aa10.61□□□□□ -0.71
SEC61B-201ENST00000223641 RPL7P18124 248 aaKnown RBP10.61□□□□□ -0.71
SEC61B-201ENST00000223641 BMI1P35226 326 aa10.61□□□□□ -0.71
SEC61B-201ENST00000223641 KHDC3LQ587J8 217 aa10.61□□□□□ -0.71
SEC61B-201ENST00000223641 PQLC2Q6ZP29 291 aa10.61□□□□□ -0.71
SEC61B-201ENST00000223641 BPIFA4PQ86YQ2 179 aa10.61□□□□□ -0.71
SEC61B-201ENST00000223641 OR8I2Q8N0Y5 310 aa10.61□□□□□ -0.71
SEC61B-201ENST00000223641 STXBP6Q8NFX7 210 aa10.61□□□□□ -0.71
SEC61B-201ENST00000223641 LYPD6BQ8NI32 183 aa10.61□□□□□ -0.71
SEC61B-201ENST00000223641 SUN5Q8TC36 379 aa10.61□□□□□ -0.71
SEC61B-201ENST00000223641 GRAMD2BQ96HH9 432 aa10.61□□□□□ -0.71
SEC61B-201ENST00000223641 C17orf77Q96MU5 243 aa10.61□□□□□ -0.71
SEC61B-201ENST00000223641 SMAD5-AS1Q9Y6J3 95 aa10.61□□□□□ -0.71
SEC61B-201ENST00000223641 MAP1LC3B2A6NCE7 125 aa10.6□□□□□ -0.71
SEC61B-201ENST00000223641 ZNF705EA8MWA4 302 aaPredicted RBP10.6□□□□□ -0.71
SEC61B-201ENST00000223641 HMGB3O15347 200 aaKnown RBP10.6□□□□□ -0.71
SEC61B-201ENST00000223641 CD5P06127 495 aa10.6□□□□□ -0.71
SEC61B-201ENST00000223641 H2AFB1P0C5Y9 115 aa10.6□□□□□ -0.71
SEC61B-201ENST00000223641 IGLC2P0DOY2 106 aa10.6□□□□□ -0.71
SEC61B-201ENST00000223641 BLOC1S1P78537 153 aa10.6□□□□□ -0.71
SEC61B-201ENST00000223641 DEFB114Q30KQ6 69 aa10.6□□□□□ -0.71
SEC61B-201ENST00000223641 MAP1LC3BQ9GZQ8 125 aa10.6□□□□□ -0.71
SEC61B-201ENST00000223641 OR51M1Q9H341 326 aa10.6□□□□□ -0.71
SEC61B-201ENST00000223641 CMYA5Q8N3K9 4069 aa10.59□□□□□ -0.71
SEC61B-201ENST00000223641 A0A087X0K7 114 aa10.59□□□□□ -0.71
SEC61B-201ENST00000223641 CXorf1O96002 111 aa10.59□□□□□ -0.71
SEC61B-201ENST00000223641 IGLV1-51P01701 117 aa10.59□□□□□ -0.71
SEC61B-201ENST00000223641 NMBP08949 121 aa10.59□□□□□ -0.71
SEC61B-201ENST00000223641 ARL14EPLP0DKL9 152 aa10.59□□□□□ -0.71
SEC61B-201ENST00000223641 INSL3P51460 131 aa10.59□□□□□ -0.71
SEC61B-201ENST00000223641 LCN15Q6UWW0 184 aa10.59□□□□□ -0.71
SEC61B-201ENST00000223641 SIGLEC15Q6ZMC9 328 aa10.59□□□□□ -0.71
SEC61B-201ENST00000223641 SFT2D1Q8WV19 159 aa10.59□□□□□ -0.71
SEC61B-201ENST00000223641 FXYD5Q96DB9 178 aa10.59□□□□□ -0.71
SEC61B-201ENST00000223641 HELTA6NFD8 242 aa10.58□□□□□ -0.72
SEC61B-201ENST00000223641 H3BQ15 152 aa10.58□□□□□ -0.72
SEC61B-201ENST00000223641 WIPF1O43516 503 aa10.58□□□□□ -0.72
SEC61B-201ENST00000223641 OR7C2O60412 319 aa10.58□□□□□ -0.72
SEC61B-201ENST00000223641 PYYP10082 97 aa10.58□□□□□ -0.72
SEC61B-201ENST00000223641 HIST1H1EP10412 219 aaKnown RBP10.58□□□□□ -0.72
SEC61B-201ENST00000223641 PMS2P11Q13670 270 aa10.58□□□□□ -0.72
SEC61B-201ENST00000223641 TCF24Q7RTU0 167 aa10.58□□□□□ -0.72
SEC61B-201ENST00000223641 PAXXQ9BUH6 204 aa10.58□□□□□ -0.72
SEC61B-201ENST00000223641 MCRIP2Q9BUT9 160 aaKnown RBP10.58□□□□□ -0.72
SEC61B-201ENST00000223641 HRH4Q9H3N8 390 aa10.58□□□□□ -0.72
SEC61B-201ENST00000223641 TRAV25A0A0B4J276 109 aa10.57□□□□□ -0.72
SEC61B-201ENST00000223641 SAP30O75446 220 aa10.57□□□□□ -0.72
SEC61B-201ENST00000223641 HBE1P02100 147 aa10.57□□□□□ -0.72
SEC61B-201ENST00000223641 NBEAP1P0C6P0 100 aa10.57□□□□□ -0.72
SEC61B-201ENST00000223641 CD33P20138 364 aa10.57□□□□□ -0.72
SEC61B-201ENST00000223641 GCHFRP30047 84 aa10.57□□□□□ -0.72
SEC61B-201ENST00000223641 GALR1P47211 349 aa10.57□□□□□ -0.72
SEC61B-201ENST00000223641 FGF8P55075 233 aaPredicted RBP10.57□□□□□ -0.72
SEC61B-201ENST00000223641 GUK1Q16774 197 aa10.57□□□□□ -0.72
SEC61B-201ENST00000223641 C9orf66Q5T8R8 295 aa10.57□□□□□ -0.72
SEC61B-201ENST00000223641 OR2K2Q8NGT1 345 aa10.57□□□□□ -0.72
SEC61B-201ENST00000223641 ZNF586Q9NXT0 402 aa10.57□□□□□ -0.72
SEC61B-201ENST00000223641 TRBV19A0A075B6N1 114 aa10.56□□□□□ -0.72
SEC61B-201ENST00000223641 TEX46H3BTG2 121 aa10.56□□□□□ -0.72
SEC61B-201ENST00000223641 TSPAN4O14817 238 aa10.56□□□□□ -0.72
SEC61B-201ENST00000223641 ZNF253O75346 499 aa10.56□□□□□ -0.72
SEC61B-201ENST00000223641 PSMB3P49720 205 aa10.56□□□□□ -0.72
SEC61B-201ENST00000223641 MEOX2P50222 304 aa10.56□□□□□ -0.72
SEC61B-201ENST00000223641 CCL20P78556 96 aa10.56□□□□□ -0.72
SEC61B-201ENST00000223641 PDE6HQ13956 83 aa10.56□□□□□ -0.72
SEC61B-201ENST00000223641 CD300EQ496F6 205 aaPredicted RBP10.56□□□□□ -0.72
SEC61B-201ENST00000223641 CLLU1Q5K131 121 aa10.56□□□□□ -0.72
SEC61B-201ENST00000223641 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.56□□□□□ -0.72
SEC61B-201ENST00000223641 TMEM61Q8N0U2 210 aa10.56□□□□□ -0.72
SEC61B-201ENST00000223641 DYNLRB2Q8TF09 96 aa10.56□□□□□ -0.72
SEC61B-201ENST00000223641 TMPRSS5Q9H3S3 457 aa10.56□□□□□ -0.72
SEC61B-201ENST00000223641 TMEM167BQ9NRX6 74 aa10.56□□□□□ -0.72
SEC61B-201ENST00000223641 PKD1L1Q8TDX9 2849 aa10.55□□□□□ -0.72
SEC61B-201ENST00000223641 TRAV2A0A0B4J234 112 aa10.55□□□□□ -0.72
SEC61B-201ENST00000223641 SOCS3O14543 225 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms