RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 TMEM256Q8N2U0 113 aa14.54□□□□□ -0.08
EXTL3-201ENST00000220562 MBD3L4A6NDZ8 208 aaPredicted RBP14.54□□□□□ -0.08
EXTL3-201ENST00000220562 MBD3L3A6NE82 208 aaPredicted RBP14.54□□□□□ -0.08
EXTL3-201ENST00000220562 MBD3L5A6NJ08 208 aaPredicted RBP14.54□□□□□ -0.08
EXTL3-201ENST00000220562 MBD3L2Q8NHZ7 208 aaPredicted RBP14.54□□□□□ -0.08
EXTL3-201ENST00000220562 LCNL1Q6ZST4 164 aa14.54□□□□□ -0.08
EXTL3-201ENST00000220562 PLEKHB2Q96CS7 222 aa14.54□□□□□ -0.08
EXTL3-201ENST00000220562 UBE2E2Q96LR5 201 aa14.54□□□□□ -0.08
EXTL3-201ENST00000220562 FAM90A2PQ658T7 463 aa14.54□□□□□ -0.08
EXTL3-201ENST00000220562 BCL6BQ8N143 479 aaPredicted RBP14.54□□□□□ -0.08
EXTL3-201ENST00000220562 RPRMLQ8N4K4 120 aa14.54□□□□□ -0.08
EXTL3-201ENST00000220562 KLHL30-AS1Q8NEE0 82 aa14.54□□□□□ -0.08
EXTL3-201ENST00000220562 A0A0G2JRQ6 117 aa14.53□□□□□ -0.08
EXTL3-201ENST00000220562 PAX4O43316 350 aa14.53□□□□□ -0.08
EXTL3-201ENST00000220562 TRAV8-1A0A0A6YYK1 113 aa14.53□□□□□ -0.08
EXTL3-201ENST00000220562 LY6HO94772 140 aa14.53□□□□□ -0.08
EXTL3-201ENST00000220562 JPT2Q9H910 190 aa14.53□□□□□ -0.08
EXTL3-201ENST00000220562 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.53□□□□□ -0.08
EXTL3-201ENST00000220562 LTBP1Q14766 1721 aa14.53□□□□□ -0.08
EXTL3-201ENST00000220562 VCYO14598 125 aa14.53□□□□□ -0.08
EXTL3-201ENST00000220562 MLANAQ16655 118 aa14.53□□□□□ -0.08
EXTL3-201ENST00000220562 USMG5Q96IX5 58 aa14.53□□□□□ -0.08
EXTL3-201ENST00000220562 TMEM158Q8WZ71 300 aa14.52□□□□□ -0.08
EXTL3-201ENST00000220562 RASL10AQ92737 203 aa14.52□□□□□ -0.08
EXTL3-201ENST00000220562 A0A087WWL8 130 aa14.52□□□□□ -0.09
EXTL3-201ENST00000220562 RNASE2P10153 161 aaKnown RBP14.52□□□□□ -0.09
EXTL3-201ENST00000220562 LY96Q9Y6Y9 160 aa14.52□□□□□ -0.09
EXTL3-201ENST00000220562 Q5PR19 223 aa14.52□□□□□ -0.09
EXTL3-201ENST00000220562 A0A087X0K7 114 aa14.51□□□□□ -0.09
EXTL3-201ENST00000220562 INSP01308 110 aa14.51□□□□□ -0.09
EXTL3-201ENST00000220562 DTX1Q86Y01 620 aa14.51□□□□□ -0.09
EXTL3-201ENST00000220562 TRPM7Q96QT4 1865 aa14.51□□□□□ -0.09
EXTL3-201ENST00000220562 ANK1P16157 1881 aa14.51□□□□□ -0.09
EXTL3-201ENST00000220562 PRTN3P24158 256 aa14.51□□□□□ -0.09
EXTL3-201ENST00000220562 RALGAPA1Q6GYQ0 2036 aa14.51□□□□□ -0.09
EXTL3-201ENST00000220562 RHPN1-AS1Q9BWJ2 59 aa14.5□□□□□ -0.09
EXTL3-201ENST00000220562 SEC16AO15027 2179 aa14.5□□□□□ -0.09
EXTL3-201ENST00000220562 DNAJC13O75165 2243 aa14.5□□□□□ -0.09
EXTL3-201ENST00000220562 LYPD1Q8N2G4 141 aa14.5□□□□□ -0.09
EXTL3-201ENST00000220562 IGKV1-16P04430 117 aa14.5□□□□□ -0.09
EXTL3-201ENST00000220562 DEFB121Q5J5C9 76 aa14.5□□□□□ -0.09
EXTL3-201ENST00000220562 C1orf194Q5T5A4 169 aa14.5□□□□□ -0.09
EXTL3-201ENST00000220562 ZNRD1Q9P1U0 126 aa14.5□□□□□ -0.09
EXTL3-201ENST00000220562 ABCA7Q8IZY2 2146 aa14.5□□□□□ -0.09
EXTL3-201ENST00000220562 LINC01356Q8N9X3 169 aa14.49□□□□□ -0.09
EXTL3-201ENST00000220562 BPESC1Q9GZL8 116 aa14.49□□□□□ -0.09
EXTL3-201ENST00000220562 C3orf79P0CE67 100 aa14.49□□□□□ -0.09
EXTL3-201ENST00000220562 SAA4P35542 130 aa14.49□□□□□ -0.09
EXTL3-201ENST00000220562 RUSC1-AS1Q66K80 236 aa14.49□□□□□ -0.09
EXTL3-201ENST00000220562 Q86TA4 180 aa14.49□□□□□ -0.09
EXTL3-201ENST00000220562 AMN1Q8IY45 258 aa14.49□□□□□ -0.09
EXTL3-201ENST00000220562 LYL1P12980 280 aa14.49□□□□□ -0.09
EXTL3-201ENST00000220562 FOXL2NBQ6ZUU3 175 aa14.49□□□□□ -0.09
EXTL3-201ENST00000220562 E7EQL1 145 aa14.48□□□□□ -0.09
EXTL3-201ENST00000220562 IGHG3P01860 377 aa14.48□□□□□ -0.09
EXTL3-201ENST00000220562 Q6ZS49 121 aa14.48□□□□□ -0.09
EXTL3-201ENST00000220562 THADAQ6YHU6 1953 aa14.48□□□□□ -0.09
EXTL3-201ENST00000220562 SYS1-DBNDD2H3BUS1 97 aa14.48□□□□□ -0.09
EXTL3-201ENST00000220562 C1orf159Q96HA4 380 aa14.48□□□□□ -0.09
EXTL3-201ENST00000220562 MCRIP2Q9BUT9 160 aaKnown RBP14.48□□□□□ -0.09
EXTL3-201ENST00000220562 LAMTOR3Q9UHA4 124 aa14.48□□□□□ -0.09
EXTL3-201ENST00000220562 HIST1H4AP62805 103 aaKnown RBP14.47□□□□□ -0.09
EXTL3-201ENST00000220562 Q6ZRM9 215 aa14.47□□□□□ -0.09
EXTL3-201ENST00000220562 DOCK6Q96HP0 2047 aa14.47□□□□□ -0.09
EXTL3-201ENST00000220562 CABIN1Q9Y6J0 2220 aa14.47□□□□□ -0.09
EXTL3-201ENST00000220562 HS3ST6Q96QI5 342 aa14.47□□□□□ -0.09
EXTL3-201ENST00000220562 SHANK2-AS3Q9BTD1 123 aa14.47□□□□□ -0.09
EXTL3-201ENST00000220562 TRAV13-1A0A0B4J241 112 aa14.46□□□□□ -0.09
EXTL3-201ENST00000220562 C8orf49Q96NF6 230 aa14.46□□□□□ -0.09
EXTL3-201ENST00000220562 UNQ6494/PRO21346Q6UXR6 183 aa14.46□□□□□ -0.09
EXTL3-201ENST00000220562 IL17RELQ6ZVW7 336 aa14.46□□□□□ -0.09
EXTL3-201ENST00000220562 LINC00479Q96M42 142 aa14.46□□□□□ -0.09
EXTL3-201ENST00000220562 LGALS1P09382 135 aaKnown RBP14.46□□□□□ -0.09
EXTL3-201ENST00000220562 SYNJ2BPP57105 145 aa14.46□□□□□ -0.1
EXTL3-201ENST00000220562 C6orf226Q5I0X4 101 aa14.46□□□□□ -0.1
EXTL3-201ENST00000220562 MRPL27Q9P0M9 148 aaKnown RBP14.46□□□□□ -0.1
EXTL3-201ENST00000220562 LEPROTO15243 131 aa14.46□□□□□ -0.1
EXTL3-201ENST00000220562 SIP14410 1827 aa14.45□□□□□ -0.1
EXTL3-201ENST00000220562 PSCAO43653 123 aa14.45□□□□□ -0.1
EXTL3-201ENST00000220562 SPXQ9BT56 116 aa14.45□□□□□ -0.1
EXTL3-201ENST00000220562 ZSWIM8A7E2V4 1837 aa14.45□□□□□ -0.1
EXTL3-201ENST00000220562 OVOL3O00110 214 aa14.45□□□□□ -0.1
EXTL3-201ENST00000220562 RP1L1Q8IWN7 2480 aaPredicted RBP14.45□□□□□ -0.1
EXTL3-201ENST00000220562 DAZ1Q9NQZ3 744 aaKnown RBP14.45□□□□□ -0.1
EXTL3-201ENST00000220562 GAGE2EQ4V326 116 aa14.45□□□□□ -0.1
EXTL3-201ENST00000220562 Q6ZS92 163 aa14.45□□□□□ -0.1
EXTL3-201ENST00000220562 RNF166Q96A37 237 aaPredicted RBP14.45□□□□□ -0.1
EXTL3-201ENST00000220562 GAGE2DQ9UEU5 116 aa14.45□□□□□ -0.1
EXTL3-201ENST00000220562 FNDC10F2Z333 226 aa14.45□□□□□ -0.1
EXTL3-201ENST00000220562 ITGB1BP1O14713 200 aa14.45□□□□□ -0.1
EXTL3-201ENST00000220562 C2orf82Q6UX34 121 aa14.45□□□□□ -0.1
EXTL3-201ENST00000220562 TIMM21Q9BVV7 248 aa14.45□□□□□ -0.1
EXTL3-201ENST00000220562 SVILO95425 2214 aa14.44□□□□□ -0.1
EXTL3-201ENST00000220562 COL4A6Q14031 1691 aa14.44□□□□□ -0.1
EXTL3-201ENST00000220562 A0A1W2PPI3 338 aa14.44□□□□□ -0.1
EXTL3-201ENST00000220562 GFRA4Q9GZZ7 299 aa14.44□□□□□ -0.1
EXTL3-201ENST00000220562 MSRB2Q9Y3D2 182 aa14.44□□□□□ -0.1
EXTL3-201ENST00000220562 SLC25A16P16260 332 aa14.44□□□□□ -0.1
EXTL3-201ENST00000220562 SRSF8Q9BRL6 282 aaKnown RBP14.44□□□□□ -0.1
EXTL3-201ENST00000220562 CDK2AP2O75956 126 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms