RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 IGHV3-53P01767 116 aa15.32■□□□□ 0.04
MBD3-201ENST00000156825 PIP4P2Q8N4L2 257 aa15.32■□□□□ 0.04
MBD3-201ENST00000156825 ALKBH7Q9BT30 221 aaPredicted RBP15.32■□□□□ 0.04
MBD3-201ENST00000156825 TMEM249Q2WGJ8 235 aa15.31■□□□□ 0.04
MBD3-201ENST00000156825 ACTL10Q5JWF8 245 aa15.31■□□□□ 0.04
MBD3-201ENST00000156825 PEF1Q9UBV8 284 aaKnown RBP15.31■□□□□ 0.04
MBD3-201ENST00000156825 RNASE2P10153 161 aaKnown RBP15.3■□□□□ 0.04
MBD3-201ENST00000156825 RPL35AP18077 110 aaKnown RBP15.3■□□□□ 0.04
MBD3-201ENST00000156825 LYZL1Q6UWQ5 148 aa15.3■□□□□ 0.04
MBD3-201ENST00000156825 COLCA2A8K830 154 aa15.3■□□□□ 0.04
MBD3-201ENST00000156825 LCNL1Q6ZST4 164 aa15.3■□□□□ 0.04
MBD3-201ENST00000156825 H3BRM9 83 aa15.3■□□□□ 0.04
MBD3-201ENST00000156825 UBE2E2Q96LR5 201 aa15.3■□□□□ 0.04
MBD3-201ENST00000156825 SRSF1Q07955 248 aaKnown RBP eCLIP15.3■□□□□ 0.04
MBD3-201ENST00000156825 TRGV9Q99603 122 aa15.3■□□□□ 0.04
MBD3-201ENST00000156825 HIST1H2BLQ99880 126 aa15.3■□□□□ 0.04
MBD3-201ENST00000156825 NHP2Q9NX24 153 aaKnown RBP15.3■□□□□ 0.04
MBD3-201ENST00000156825 CD300EQ496F6 205 aaPredicted RBP15.3■□□□□ 0.04
MBD3-201ENST00000156825 CHCHD5Q9BSY4 110 aa15.3■□□□□ 0.04
MBD3-201ENST00000156825 CYSLTR1Q9Y271 337 aa15.3■□□□□ 0.04
MBD3-201ENST00000156825 WDR81Q562E7 1941 aa15.29■□□□□ 0.04
MBD3-201ENST00000156825 A0A1W2PPI3 338 aa15.29■□□□□ 0.04
MBD3-201ENST00000156825 D6R8Y8 96 aa15.29■□□□□ 0.04
MBD3-201ENST00000156825 OVOL3O00110 214 aa15.29■□□□□ 0.04
MBD3-201ENST00000156825 TNFSF13O75888 250 aa15.29■□□□□ 0.04
MBD3-201ENST00000156825 OTOGLQ3ZCN5 2332 aa15.29■□□□□ 0.04
MBD3-201ENST00000156825 A0A1B0GWB2 263 aa15.29■□□□□ 0.04
MBD3-201ENST00000156825 OVOL1O14753 267 aa15.29■□□□□ 0.04
MBD3-201ENST00000156825 SAMD13Q5VXD3 122 aa15.29■□□□□ 0.04
MBD3-201ENST00000156825 COPS9Q8WXC6 57 aa15.29■□□□□ 0.04
MBD3-201ENST00000156825 GNB1LQ9BYB4 327 aa15.29■□□□□ 0.04
MBD3-201ENST00000156825 TRBV7-9A0A0J9YWB2 115 aa15.29■□□□□ 0.04
MBD3-201ENST00000156825 WDR86Q86TI4 376 aa15.29■□□□□ 0.04
MBD3-201ENST00000156825 ZNF138P52744 262 aa15.28■□□□□ 0.04
MBD3-201ENST00000156825 ERVK11-1P61568 191 aa15.28■□□□□ 0.04
MBD3-201ENST00000156825 ZNF415Q09FC8 603 aa15.28■□□□□ 0.04
MBD3-201ENST00000156825 ASCL4Q6XD76 172 aa15.28■□□□□ 0.04
MBD3-201ENST00000156825 TMEM8BA6NDV4 472 aa15.28■□□□□ 0.04
MBD3-201ENST00000156825 H3BUT2 72 aa15.28■□□□□ 0.04
MBD3-201ENST00000156825 M0R1W7 72 aa15.28■□□□□ 0.04
MBD3-201ENST00000156825 CD28P10747 220 aa15.28■□□□□ 0.04
MBD3-201ENST00000156825 KLHL30-AS1Q8NEE0 82 aa15.28■□□□□ 0.04
MBD3-201ENST00000156825 TMEM256Q8N2U0 113 aa15.28■□□□□ 0.04
MBD3-201ENST00000156825 DSCR9P59020 149 aa15.28■□□□□ 0.04
MBD3-201ENST00000156825 LCN12Q6JVE5 192 aa15.27■□□□□ 0.04
MBD3-201ENST00000156825 LAMTOR2Q9Y2Q5 125 aa15.27■□□□□ 0.04
MBD3-201ENST00000156825 PRTN3P24158 256 aa15.27■□□□□ 0.04
MBD3-201ENST00000156825 IFI27L1Q96BM0 104 aa15.27■□□□□ 0.04
MBD3-201ENST00000156825 C1orf147Q96MC9 270 aaPredicted RBP15.27■□□□□ 0.04
MBD3-201ENST00000156825 LIME1Q9H400 295 aa15.27■□□□□ 0.04
MBD3-201ENST00000156825 GTSCR1Q86UQ5 136 aa15.27■□□□□ 0.03
MBD3-201ENST00000156825 NXT2Q9NPJ8 142 aaKnown RBP15.27■□□□□ 0.03
MBD3-201ENST00000156825 LSM4Q9Y4Z0 139 aaKnown RBP15.27■□□□□ 0.03
MBD3-201ENST00000156825 TRAV1-1A0A0B4J248 108 aa15.27■□□□□ 0.03
MBD3-201ENST00000156825 MALP21145 153 aa15.27■□□□□ 0.03
MBD3-201ENST00000156825 RSPO1Q2MKA7 263 aaPredicted RBP15.27■□□□□ 0.03
MBD3-201ENST00000156825 CFAP161Q6P656 301 aa15.27■□□□□ 0.03
MBD3-201ENST00000156825 RHPN1-AS1Q9BWJ2 59 aa15.27■□□□□ 0.03
MBD3-201ENST00000156825 SYNJ2BPP57105 145 aa15.26■□□□□ 0.03
MBD3-201ENST00000156825 OOSP1A8MZH6 123 aa15.26■□□□□ 0.03
MBD3-201ENST00000156825 MCRIP2Q9BUT9 160 aaKnown RBP15.26■□□□□ 0.03
MBD3-201ENST00000156825 REG4Q9BYZ8 158 aa15.26■□□□□ 0.03
MBD3-201ENST00000156825 SPCS1Q9Y6A9 102 aa15.26■□□□□ 0.03
MBD3-201ENST00000156825 MYLKQ15746 1914 aa15.26■□□□□ 0.03
MBD3-201ENST00000156825 TRBV24-1A0A075B6N3 115 aa15.26■□□□□ 0.03
MBD3-201ENST00000156825 G3V318 75 aa15.26■□□□□ 0.03
MBD3-201ENST00000156825 SP5Q6BEB4 398 aaPredicted RBP15.26■□□□□ 0.03
MBD3-201ENST00000156825 SRSF4Q08170 494 aaKnown RBP15.25■□□□□ 0.03
MBD3-201ENST00000156825 ERCC8Q13216 396 aa15.25■□□□□ 0.03
MBD3-201ENST00000156825 C11orf68Q9H3H3 251 aaKnown RBP15.25■□□□□ 0.03
MBD3-201ENST00000156825 TNCP24821 2201 aa15.25■□□□□ 0.03
MBD3-201ENST00000156825 TRAV2A0A0B4J234 112 aa15.25■□□□□ 0.03
MBD3-201ENST00000156825 ZNF876PQ49A33 203 aa15.25■□□□□ 0.03
MBD3-201ENST00000156825 TRGV1A0A0A0MS02 117 aa15.25■□□□□ 0.03
MBD3-201ENST00000156825 SMKR1H3BMG3 65 aa15.25■□□□□ 0.03
MBD3-201ENST00000156825 DPM2O94777 84 aa15.25■□□□□ 0.03
MBD3-201ENST00000156825 AMBPP02760 352 aa15.25■□□□□ 0.03
MBD3-201ENST00000156825 RNF5Q99942 180 aa15.25■□□□□ 0.03
MBD3-201ENST00000156825 F2Z2F3 143 aa15.25■□□□□ 0.03
MBD3-201ENST00000156825 SH2D1AO60880 128 aa15.25■□□□□ 0.03
MBD3-201ENST00000156825 PPBPP02775 128 aa15.25■□□□□ 0.03
MBD3-201ENST00000156825 C14orf178Q8N769 122 aaPredicted RBP15.25■□□□□ 0.03
MBD3-201ENST00000156825 RCHY1Q96PM5 261 aa15.25■□□□□ 0.03
MBD3-201ENST00000156825 MRPS16Q9Y3D3 137 aaKnown RBP15.25■□□□□ 0.03
MBD3-201ENST00000156825 ETV2O00321 342 aaPredicted RBP15.24■□□□□ 0.03
MBD3-201ENST00000156825 MGAMO43451 1857 aa15.24■□□□□ 0.03
MBD3-201ENST00000156825 TRGV11A0A075B6L2 103 aa15.24■□□□□ 0.03
MBD3-201ENST00000156825 PLA2G2CQ5R387 149 aa15.24■□□□□ 0.03
MBD3-201ENST00000156825 SPSB3Q6PJ21 355 aa15.24■□□□□ 0.03
MBD3-201ENST00000156825 Q6ZS49 121 aa15.24■□□□□ 0.03
MBD3-201ENST00000156825 Q71RC1 249 aaPredicted RBP15.24■□□□□ 0.03
MBD3-201ENST00000156825 BEND2Q8NDZ0 799 aa15.24■□□□□ 0.03
MBD3-201ENST00000156825 NUP35Q8NFH5 326 aa15.24■□□□□ 0.03
MBD3-201ENST00000156825 MMP23AO75900 390 aa15.24■□□□□ 0.03
MBD3-201ENST00000156825 DTX1Q86Y01 620 aa15.24■□□□□ 0.03
MBD3-201ENST00000156825 TRAV9-2A0A087WT02 112 aa15.23■□□□□ 0.03
MBD3-201ENST00000156825 ATP6V0E1O15342 81 aa15.23■□□□□ 0.03
MBD3-201ENST00000156825 NAA38Q9BRA0 125 aaKnown RBP15.23■□□□□ 0.03
MBD3-201ENST00000156825 NPC2P61916 151 aa15.23■□□□□ 0.03
MBD3-201ENST00000156825 HIST3H2BBQ8N257 126 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms