RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Plrg1Q922V4 513 aaKnown RBP18.63■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Ear10Q923L6 156 aa18.63■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Suv39h2Q9EQQ0 477 aa18.63■□□□□ 0.57
Scn1b-201ENSMUST00000098548 PbkQ9JJ78 330 aa18.63■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Lnp1A0A1B0GSK3 178 aa18.62■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Vmn1r224E9PWK2 298 aa18.62■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Olfr920E9Q413 310 aa18.62■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Rab33bO35963 229 aa18.62■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Gal3st2Q6XQH0 394 aa18.62■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Tmem106cQ80VP8 260 aa18.62■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Prss35Q8C0F9 409 aa18.62■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Tsen54Q8C2A2 525 aa18.62■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Vmn1r211Q8R266 298 aa18.62■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Vmn1r226Q8R2A8 298 aa18.62■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Olfr1408Q8VG32 310 aa18.62■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Olfr916Q8VG53 310 aa18.62■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Fgf16Q9ESL8 207 aa18.62■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Angptl4Q9Z1P8 410 aa18.62■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Ighv14-3A0A075B5R9 117 aa18.61■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Zfp764E9QAP1 431 aa18.61■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Gm43191F6YIH5 235 aa18.61■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Gm2174F6ZVF2 133 aa18.61■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Olfr1220F7BL62 311 aa18.61■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Gm37988J3QM41 62 aa18.61■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Gm20877J3QPZ4 227 aa18.61■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Ier2P17950 221 aa18.61■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Ighv3-6P18531 116 aa18.61■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Srp9P49962 86 aa18.61■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Lhx4P53776 390 aa18.61■□□□□ 0.57
Scn1b-201ENSMUST00000098548 PcnpQ6P8I4 178 aaKnown RBP18.61■□□□□ 0.57
Scn1b-201ENSMUST00000098548 C1qtnf5Q8K479 243 aa18.61■□□□□ 0.57
Scn1b-201ENSMUST00000098548 NmbQ9CR53 121 aa18.61■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Rep15Q9D7T1 230 aa18.61■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Ube2j1Q9JJZ4 318 aa18.61■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Rif1Q6PR54 2419 aaKnown RBP18.61■□□□□ 0.57
Scn1b-201ENSMUST00000098548 LrbaQ9ESE1 2856 aa18.6■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Olfr1532-ps1A0A0R4J8U2 307 aa18.6■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Gm10269G3UWD7 123 aa18.6■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Olfr707K7N662 307 aa18.6■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Lclat1Q3UN02 376 aa18.6■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Lhfpl4Q5U4E0 247 aa18.6■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Gemin8Q8BHE1 238 aa18.6■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Harbi1Q8BR93 349 aa18.6■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Rab29Q91YQ1 204 aa18.6■□□□□ 0.57
Scn1b-201ENSMUST00000098548 GmfbQ9CQI3 142 aa18.6■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Olfr716Q9EPG6 314 aa18.6■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Zdhhc16Q9ESG8 361 aa18.6■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Dscaml1Q4VA61 2053 aa18.6■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Ino80eA0A0U1RP99 260 aa18.59■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Olfr573-ps1A0A1B0GRU2 297 aa18.59■□□□□ 0.57
Scn1b-201ENSMUST00000098548 SncaO55042 140 aaKnown RBP18.59■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Rab5cP35278 216 aa18.59■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Zfp92Q62396 488 aa18.59■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Fam168aQ8BGZ2 244 aa18.59■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Olfr472Q8VG43 310 aa18.59■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Fam219aQ9D772 157 aa18.59■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Ppp1r1aQ9ERT9 171 aa18.59■□□□□ 0.57
Scn1b-201ENSMUST00000098548 OtogO55225 2910 aa18.59■□□□□ 0.57
Scn1b-201ENSMUST00000098548 4930467E23RikD3Z1P8 350 aa18.59■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Gm15319E9Q637 350 aa18.59■□□□□ 0.57
Scn1b-201ENSMUST00000098548 P06335 190 aa18.59■□□□□ 0.57
Scn1b-201ENSMUST00000098548 B4galt1P15535 399 aa18.59■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Zfp72Q0VFY0 435 aa18.59■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Gm21119Q8C646 350 aa18.59■□□□□ 0.57
Scn1b-201ENSMUST00000098548 TskuQ8CBR6 354 aa18.59■□□□□ 0.57
Scn1b-201ENSMUST00000098548 9130230L23RikQ8CC80 163 aa18.59■□□□□ 0.57
Scn1b-201ENSMUST00000098548 PpifQ99KR7 206 aaKnown RBP18.59■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Q9DAL9 119 aa18.59■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Ap1s2Q9DB50 160 aa18.59■□□□□ 0.57
Scn1b-201ENSMUST00000098548 H2-M5A7VMS3 348 aa18.58■□□□□ 0.56
Scn1b-201ENSMUST00000098548 Smad7O35253 426 aa18.58■□□□□ 0.56
Scn1b-201ENSMUST00000098548 P01759 136 aa18.58■□□□□ 0.56
Scn1b-201ENSMUST00000098548 Cdkn1aP39689 159 aa18.58■□□□□ 0.56
Scn1b-201ENSMUST00000098548 Rpl30P62889 115 aaKnown RBP18.58■□□□□ 0.56
Scn1b-201ENSMUST00000098548 Rpl31P62900 125 aaKnown RBP18.58■□□□□ 0.56
Scn1b-201ENSMUST00000098548 Hist1h2baP70696 127 aa18.58■□□□□ 0.56
Scn1b-201ENSMUST00000098548 Slc39a7Q31125 476 aa18.58■□□□□ 0.56
Scn1b-201ENSMUST00000098548 Vdac2Q60930 295 aaKnown RBP18.58■□□□□ 0.56
Scn1b-201ENSMUST00000098548 SepsecsQ6P6M7 504 aa18.58■□□□□ 0.56
Scn1b-201ENSMUST00000098548 Zfp85Q7TMC9 473 aa18.58■□□□□ 0.56
Scn1b-201ENSMUST00000098548 Tmem204Q7TQI0 226 aa18.58■□□□□ 0.56
Scn1b-201ENSMUST00000098548 Olfr1509Q7TQQ0 308 aa18.58■□□□□ 0.56
Scn1b-201ENSMUST00000098548 Olfr1225Q7TR01 311 aa18.58■□□□□ 0.56
Scn1b-201ENSMUST00000098548 Olfr1148Q7TR35 314 aa18.58■□□□□ 0.56
Scn1b-201ENSMUST00000098548 Hif1anQ8BLR9 349 aa18.58■□□□□ 0.56
Scn1b-201ENSMUST00000098548 Znf146Q8BQN6 292 aa18.58■□□□□ 0.56
Scn1b-201ENSMUST00000098548 Olfr344Q8VFP9 309 aa18.58■□□□□ 0.56
Scn1b-201ENSMUST00000098548 SvbpQ99LQ4 66 aa18.58■□□□□ 0.56
Scn1b-201ENSMUST00000098548 NanpQ9CPT3 248 aa18.58■□□□□ 0.56
Scn1b-201ENSMUST00000098548 9130008F23RikQ9D2Z6 181 aa18.58■□□□□ 0.56
Scn1b-201ENSMUST00000098548 Prr30Q9D9B7 401 aa18.58■□□□□ 0.56
Scn1b-201ENSMUST00000098548 Dolpp1Q9JMF7 238 aa18.58■□□□□ 0.56
Scn1b-201ENSMUST00000098548 Olfr204E9Q8M0 305 aa18.57■□□□□ 0.56
Scn1b-201ENSMUST00000098548 Olfr1086Q8VFL9 310 aa18.57■□□□□ 0.56
Scn1b-201ENSMUST00000098548 Fam162bQ9CX19 157 aa18.57■□□□□ 0.56
Scn1b-201ENSMUST00000098548 Lipt2Q9D009 231 aa18.57■□□□□ 0.56
Scn1b-201ENSMUST00000098548 Sh2d6Q9D413 297 aa18.57■□□□□ 0.56
Scn1b-201ENSMUST00000098548 Abhd5Q9DBL9 351 aa18.57■□□□□ 0.56
Scn1b-201ENSMUST00000098548 Nek7Q9ES74 302 aa18.57■□□□□ 0.56
Scn1b-201ENSMUST00000098548 Trav6-1A0A075B5Z8 112 aa18.56■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms